"probe","sequence_id","alias","description" "AAL18970","AAL18970","STM0006, yaaJ","putative alanine/glycine transport protein [Ensembl]. Sodium:alanine symporter family [Interproscan]." "AAL18975","AAL18975","STM0011, yaaI","putative periplasmic protein [Ensembl]. Protein of unknown function (DUF2541) [Interproscan]." "AAL18979","AAL18979","STM0015","putative bacteriophage protein [Ensembl]. LydA holin phage [Interproscan]." "AAL18986","AAL18986","STM0022, bcfB","fimbrial chaparone [Ensembl]. Pili assembly chaperone PapD, Pili and flagellar-assembly chaperone [Interproscan]." "AAL18993","AAL18993","STM0029","putative transcription regulator [Ensembl]. Transcriptional regulatory protein [Interproscan]." "AAL18997","AAL18997","STM0033","putative 5'-nucleotidase [Ensembl]. 5'-nucleotidase, Calcineurin-like phosphoesterase [Interproscan]." "AAL19017","AAL19017","STM0053","putative transcription regulator [Ensembl]. Histidine kinase-, Single cache domain 3 [Interproscan]." "AAL19029","AAL19029","STM0065","putative viral protein [Ensembl]." "AAL19033","AAL19033","STM0069, caiE","stimulates carnitine racemase activity of CaiD and CaiB activity [Ensembl]. Bacterial transferase hexapeptide (six repeats) [Interproscan]." "AAL19176","AAL19176","STM0212","putative inner membrane protein [Ensembl]. Sugar (and other) transporter [Interproscan]." "AAL19300","AAL19300","STM0346","putative outer membrane protein; homolog of ail and ompX [Ensembl]. Outer membrane protein beta-barrel domain [Interproscan]." "AAL19301","AAL19301","STM0347","putative response regulator [Ensembl]." "AAL19302","AAL19302","STM0348","putative inner membrane protein [Ensembl]." "AAL19475","AAL19475","STM0521, ybbV","putative cytoplasmic protein [Ensembl]." "AAL19564","AAL19564","STM0613","putative hydrogenase protein [Ensembl]. DMSO reductase anchor subunit (DmsC) [Interproscan]." "AAL19646","AAL19646","STM0702, kdpE","response regulator in two-component regulatory system with KdpD [Ensembl]." "AAL19663","AAL19663","STM0719","putative UDP-galactopyranose mutase [Ensembl]. UDP-galactopyranose mutase, NAD(P)-binding Rossmann-like domain [Interproscan]." "AAL19664","AAL19664","STM0720","putative glycosyl transferase [Ensembl]. Glycosyl transferase family 2 [Interproscan]." "AAL19665","AAL19665","STM0721","putative glycosyl transferase [Ensembl]. Glycosyl transferase 4-like, Glycosyl transferases group 1 [Interproscan]." "AAL19666","AAL19666","STM0722","putative ABC transporter permease protein [Ensembl]. ABC-2 type transporter [Interproscan]." "AAL19667","AAL19667","STM0723","putative ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Ensembl]. ABC transporter [Interproscan]." "AAL19668","AAL19668","STM0724","putative glycosyltransferase, cell wall biogenesis [Ensembl]. Glycosyltransferase like family 2, Galactofuranosyltransferase 2 N-terminal [Interproscan]." "AAL19669","AAL19669","STM0725","putative glycosyltransferase, cell wall biogenesis [Ensembl]." "AAL19670","AAL19670","STM0726","putative glycosyl transferase [Ensembl]." "AAL19673","AAL19673","STM0729, abrB","putative transport protein [Ensembl]. Transition state regulatory protein AbrB [Interproscan]." "AAL19748","AAL19748","STM0811, ybhN","putative negative regulator [Ensembl]. Lysylphosphatidylglycerol synthase TM region [Interproscan]." "AAL19820","AAL19820","STM0885","putative inner membrane protein; homology to SgaT from Vibrio [Ensembl]. PTS system [Interproscan]." "AAL19877","AAL19877","STM0941, ybjY","putative membrane protein [Ensembl]. Barrel-sandwich domain of CusB or HlyD membrane-fusion [Interproscan]." "AAL19878","AAL19878","STM0942, ybjZ","putative ABC superfamily (atp&memb) transport protein [Ensembl]. ABC transporter, FtsX-like permease family, MacB-like periplasmic core domain [Interproscan]." "AAL19910","AAL19910","STM0976, ycaP","putative inner membrane protein [Ensembl]. Protein of unknown function (DUF421) [Interproscan]." "AAL19940","AAL19940","STM1006","Gifsy-2 prophage excisionase [Ensembl]. Putative excisionase (DUF1233) [Interproscan]." "AAL19989","AAL19989","STM1056","Gifsy-2 prophage protein [Ensembl]. DinI-like family [Interproscan]." "AAL20010","AAL20010","STM1077, yccT","putative periplasmic protein [Ensembl]. Uncharacterized protein conserved in bacteria (DUF2057) [Interproscan]." "AAL20071","AAL20071","STM1141, csgE","curli production assembly/transport component, 2nd curli operon [Ensembl]. Curli assembly protein CsgE [Interproscan]." "AAL20072","AAL20072","STM1142, csgD","putative transcriptional regulator [Ensembl]. Bacterial regulatory proteins [Interproscan]." "AAL20084","AAL20084","STM1154, yceE","putative MFS family transport protein [Ensembl]. Major Facilitator Superfamily [Interproscan]." "AAL20152","AAL20152","STM1223, potC","spermidine/putrescine transporter [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan]." "AAL20153","AAL20153","STM1224, sifA","lysosomal glycoprotein (lgp)-containing structures [Ensembl]. Sif protein [Interproscan]." "AAL20164","AAL20164","STM1235, ymfB","putative MutT-like protein [Ensembl]. NUDIX domain [Interproscan]." "AAL20178","AAL20178","STM1252","putative cytoplasmic protein [Ensembl]. BNR repeat-like domain [Interproscan]." "AAL20186","AAL20186","STM1260","putative inner membrane protein [Ensembl]. Mechanosensitive ion channel [Interproscan]." "AAL20193","AAL20193","STM1268","putative cytoplasmic protein [Ensembl]." "AAL20278","AAL20278","STM1353, ydiR","putative electron transfer flavoprotein [Ensembl]. Electron transfer flavoprotein domain, Electron transfer flavoprotein FAD-binding domain [Interproscan]." "AAL20303","AAL20303","STM1379, orf48","putative amino acid permease [Ensembl]. Amino acid permease [Interproscan]." "AAL20304","AAL20304","STM1380, orf32","putative hydrolase or acyltransferase [Ensembl]. Alpha/beta hydrolase family [Interproscan]." "AAL20306","AAL20306","STM1382, orf408","putative regulatory protein, deoR family [Ensembl]. pfkB family carbohydrate kinase, DeoR-like helix-turn-helix domain [Interproscan]." "AAL20314","AAL20314","STM1390, orf242","putative regulatory proteins, merR family [Ensembl]. MerR HTH family regulatory protein [Interproscan]." "AAL20317","AAL20317","STM1393, ssaB","secretion system apparatus protein [Ensembl]." "AAL20318","AAL20318","STM1394, ssaC","secretion system apparatus protein [Ensembl]. Bacterial type II and III secretion system protein, Bacterial type II/III secretion system short domain [Interproscan]." "AAL20319","AAL20319","STM1395, ssaD","secretion system apparatus protein [Ensembl]. Inner membrane component of T3SS [Interproscan]." "AAL20321","AAL20321","STM1397, sseA","secretion system effector [Ensembl]." "AAL20322","AAL20322","STM1398, sseB","secretion system effector [Ensembl]. EspA-like secreted protein [Interproscan]." "AAL20323","AAL20323","STM1399, sscA","secretion system chaparone [Ensembl]." "AAL20324","AAL20324","STM1400, sseC","secretion system effector [Ensembl]. Secretion system effector C (SseC) like family [Interproscan]." "AAL20325","AAL20325","STM1401, sseD","secretion system effector [Ensembl]. Enterobacterial EspB protein [Interproscan]." "AAL20326","AAL20326","STM1402, sseE","secretion system effector [Ensembl]. Type III secretion system regulator (LcrR) [Interproscan]." "AAL20327","AAL20327","STM1403, sscB","secretion system chaparone [Ensembl]." "AAL20328","AAL20328","STM1404, sseF","secretion system effector [Ensembl]." "AAL20329","AAL20329","STM1405, sseG","secretion system effector [Ensembl]." "AAL20330","AAL20330","STM1406, ssaG","secretion system apparatus [Ensembl]. Type III secretion needle MxiH [Interproscan]." "AAL20331","AAL20331","STM1407, ssaH","secretion system apparatus [Ensembl]. Protein of unknown function (DUF1039) [Interproscan]." "AAL20332","AAL20332","STM1408, ssaI","secretion system apparatus [Ensembl]." "AAL20333","AAL20333","STM1409, ssaJ","secretion system apparatus protein [Ensembl]. Secretory protein of YscJ/FliF family [Interproscan]." "AAL20334","AAL20334","STM1410","putative cytoplasmic protein [Ensembl]." "AAL20335","AAL20335","STM1411, ssaK","secretion system apparatus protein [Ensembl]." "AAL20336","AAL20336","STM1412, ssaL","secretion system apparatus protein [Ensembl]. HrpJ-like domain [Interproscan]." "AAL20337","AAL20337","STM1413, ssaM","secretion system apparatus protein [Ensembl]." "AAL20338","AAL20338","STM1414, ssaV","secretion system apparatus protein [Ensembl]. FHIPEP family [Interproscan]." "AAL20339","AAL20339","STM1415, ssaN","secretion system apparatus protein [Ensembl]. ATP synthase alpha/beta family, T3SS EscN ATPase C-terminal domain [Interproscan]." "AAL20340","AAL20340","STM1416, ssaO","secretion system apparatus protein [Ensembl]." "AAL20341","AAL20341","STM1417, ssaP","secretion system apparatus protein [Ensembl]." "AAL20342","AAL20342","STM1418, ssaQ","secretion system apparatus protein [Ensembl]. Type III flagellar switch regulator (C-ring) FliN C-term [Interproscan]." "AAL20343","AAL20343","STM1419, ssaR","secretion system apparatus protein [Ensembl]. FliP family [Interproscan]." "AAL20344","AAL20344","STM1420, ssaS","secretion system apparatus [Ensembl]. Bacterial export proteins [Interproscan]." "AAL20345","AAL20345","STM1421, ssaT","secretion system apparatus protein [Ensembl]. Bacterial export proteins [Interproscan]." "AAL20346","AAL20346","STM1422, ssaU","secretion system apparatus protein [Ensembl]. FlhB HrpN YscU SpaS Family [Interproscan]." "AAL20427","AAL20427","STM1508, ydfI","putative mannitol dehydrogenase [Ensembl]. Mannitol dehydrogenase Rossmann domain, Mannitol dehydrogenase C-terminal domain [Interproscan]." "AAL20440","AAL20440","STM1521, marC","putative MarC Transporter [Ensembl]. MarC family integral membrane protein [Interproscan]." "AAL20447","AAL20447","STM1528","putative outer membrane protein [Ensembl]. Domain of unknown function (DUF4440) [Interproscan]." "AAL20463","AAL20463","STM1544, pqaA","PhoPQ-regulated protein [Ensembl]. PhoPQ-activated pathogenicity-related protein [Interproscan]." "AAL20464","AAL20464","STM1545","putative multidrug efflux protein [Ensembl]. Major Facilitator Superfamily [Interproscan]." "AAL20520","AAL20520","STM1602, sifB","Salmonella translocated effector: translocated by SPI-2 [Ensembl]. Sif protein [Interproscan]." "AAL20530","AAL20530","STM1612","putative cellulase protein [Ensembl]. M42 glutamyl aminopeptidase [Interproscan]." "AAL20532","AAL20532","STM1614","putative PTS system enzyme IIC component [Ensembl]. PTS system sugar-specific permease component [Interproscan]." "AAL20536","AAL20536","STM1618","putative DeoR family transcriptional repressor of sgc operon [Ensembl]. DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain [Interproscan]." "AAL20537","AAL20537","STM1619","cryptic aminoglycoside resistance gene [Ensembl]. Acetyltransferase (GNAT) family [Interproscan]." "AAL20549","AAL20549","STM1631, sseJ","Salmonella translocated effector [Ensembl]. Sif protein, GDSL-like Lipase/Acylhydrolase [Interproscan]." "AAL20550","AAL20550","STM1632","putative inner membrane protein [Ensembl]. Protein of unknown function (DUF1294) [Interproscan]." "AAL20552","AAL20552","STM1634","putative amino acid ABC transporter permease component [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan]." "AAL20553","AAL20553","STM1635","putative ABC-type polar amino acid transport system [Ensembl]. ABC transporter [Interproscan]." "AAL20554","AAL20554","STM1636","putative ABC-type transport system probable membrane spanning protein [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan]." "AAL20555","AAL20555","STM1637","putative inner membrane protein [Ensembl]. Dolichyl-phosphate-mannose-protein mannosyltransferase [Interproscan]." "AAL20564","AAL20564","STM1646, ydbH","putative periplasmic protein [Ensembl]. Dicarboxylate transport [Interproscan]." "AAL20588","AAL20588","STM1671","putative bacterial regulatory helix-turn-helix protein, araC family [Ensembl]. Helix-turn-helix domain, GyrI-like small molecule binding domain [Interproscan]." "AAL20598","AAL20598","STM1681, ycjG","putative chloromuconate cycloisomerase [Ensembl]. Enolase C-terminal domain-like, Mandelate racemase / muconate lactonizing enzyme [Interproscan]." "AAL20615","AAL20615","STM1698","putative inner membrane protein [Ensembl]." "AAL20621","AAL20621","STM1703, yciR","putative PAS/PAC domain protein [Ensembl]. EAL domain, PAS domain, Diguanylate cyclase [Interproscan]." "AAL20675","AAL20675","STM1760","putative TPR repeat protein [Ensembl]. Sel1 repeat [Interproscan]." "AAL20742","AAL20742","STM1827","putative diguanylate cyclase/phosphodiesterase [Ensembl]. EAL domain, CSS motif domain associated with EAL [Interproscan]." "AAL20763","AAL20763","STM1848, yebS","putative inner membrane protein [Ensembl]. Paraquat-inducible protein A [Interproscan]." "AAL20764","AAL20764","STM1849","putative inner membrane protein [Ensembl]. MlaD protein [Interproscan]." "AAL20768","AAL20768","STM1853, prpA","serine/threonine protein phosphatase [Ensembl]. Calcineurin-like phosphoesterase [Interproscan]." "AAL20771","AAL20771","STM1856","putative cytoplasmic protein [Ensembl]. Protein of unknown function (DUF1398) [Interproscan]." "AAL20772","AAL20772","STM1857","putative acetyltransferase [Ensembl]. Acetyltransferase (GNAT) family [Interproscan]." "AAL20782","AAL20782","STM1868, mig-3","phage-tail assembly protein-like protein [Ensembl]. Macro domain, Caudovirales tail fibre assembly protein [Interproscan]." "AAL20856","AAL20856","STM1941","putative inner membrane protein [Ensembl]." "AAL21033","AAL21033","STM2129, yegB","putative MFS family transport protein [Ensembl]. Major Facilitator Superfamily [Interproscan]." "AAL21040","AAL21040","STM2137","putative cytoplasmic protein [Ensembl]." "AAL21041","AAL21041","STM2138","putative cytoplasmic protein [Ensembl]. Tir chaperone protein (CesT) family [Interproscan]." "AAL21042","AAL21042","STM2139","putative inner membrane protein [Ensembl]." "AAL21120","AAL21120","STM2217, yejB","putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan]." "AAL21121","AAL21121","STM2218, yejE","putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component [Ensembl]. N-terminal TM domain of oligopeptide transport permease C, Binding-protein-dependent transport system inner membrane component [Interproscan]." "AAL21175","AAL21175","STM2274","putative permease [Ensembl]. Major Facilitator Superfamily [Interproscan]." "AAL21189","AAL21189","STM2288","putative cytoplasmic protein [Ensembl]." "AAL21190","AAL21190","STM2289","putative 2,4-dihydoxyhept-2-ene-1,7-dioic acid aldolase [Ensembl]. HpcH/HpaI aldolase/citrate lyase family [Interproscan]." "AAL21192","AAL21192","STM2291, yfaW","putative galactonate dehydratase [Ensembl]. Enolase C-terminal domain-like, Mandelate racemase / muconate lactonizing enzyme [Interproscan]." "AAL21193","AAL21193","STM2292, yfaX","putative transcriptional regulator [Ensembl]. IclR helix-turn-helix domain, Bacterial transcriptional regulator [Interproscan]." "AAL21250","AAL21250","STM2349, yfcG","putative glutathione S-transferase [Ensembl]. Glutathione S-transferase [Interproscan]." "AAL21374","AAL21374","STM2480, narQ","sensory histidine kinase in two-component regulatory system with NarP (NarL) [Ensembl]." "AAL21398","AAL21398","STM2504","putative cytoplasmic protein [Ensembl]." "AAL21664","AAL21664","STM2779","putative inner membrane protein [Ensembl]." "AAL21665","AAL21665","STM2780","pipB-like protein [Ensembl]. Pentapeptide repeats (8 copies) [Interproscan]." "AAL21788","AAL21788","STM2908","putative cytoplasmic protein [Ensembl]." "AAL21999","AAL21999","STM3125","putative cytoplasmic protein [Ensembl]. Protein of unknown function (DUF3156) [Interproscan]." "AAL22002","AAL22002","STM3128","putative oxidoreductase [Ensembl]. FAD dependent oxidoreductase [Interproscan]." "AAL22003","AAL22003","STM3129","putative NAD-dependent aldehyde dehydrogenase [Ensembl]. Aldehyde dehydrogenase family [Interproscan]." "AAL22140","AAL22140","STM3268, yraR","putative nucleoside-diphosphate-sugar epimerase [Ensembl]. NAD(P)H-binding [Interproscan]." "AAL22235","AAL22235","STM3366, yhcR","putative inner membrane protein [Ensembl]. Protein of unknown function (DUF1656) [Interproscan]." "AAL22257","AAL22257","STM3388","putative membrane domain protein involved in signal transduction [Ensembl]. EAL domain, Diguanylate cyclase, Bacterial signalling protein N terminal repeat [Interproscan]." "AAL22268","AAL22268","STM3405, smf","putative protein involved in DNA uptake [Ensembl]. DprA winged helix domain, DNA recombination-mediator protein A [Interproscan]." "AAL22320","AAL22320","STM3457, kefB","CPA2 family K+:H+ antiporter [Ensembl]. TrkA-N domain, Sodium/hydrogen exchanger family [Interproscan]." "AAL22321","AAL22321","STM3458, yheR","putative NAD(P)H oxidoreductase [Ensembl]. Flavodoxin-like fold [Interproscan]." "AAL22434","AAL22434","STM3574, yhhM","putative inner membrane protein [Ensembl]. Protein of unknown function (DUF2500) [Interproscan]." "AAL22442","AAL22442","STM3582, yhhT","putative PerM family permease [Ensembl]. AI-2E family transporter [Interproscan]." "AAL22445","AAL22445","STM3585, yhhJ","putative ABC superfamily transport protein [Ensembl]. ABC-2 family transporter protein [Interproscan]." "AAL22468","AAL22468","STM3608, yhjD","putative tRNA-processing ribonuclease [Ensembl]. Virulence factor BrkB [Interproscan]." "AAL22549","AAL22549","STM3690","putative inner membrane lipoprotein [Ensembl]. Protein of unknown function (DUF3251) [Interproscan]." "AAL22610","AAL22610","STM3752","putative cytoplasmic protein [Ensembl]." "AAL22614","AAL22614","STM3756, rmbA","putative cytoplasmic protein [Ensembl]." "AAL22649","AAL22649","STM3791","putative cytoplasmic protein [Ensembl]. Domain of unknown function (DUF4432) [Interproscan]." "AAL22650","AAL22650","STM3792","putative L-fucose permease [Ensembl]. Major Facilitator Superfamily [Interproscan]." "AAL22664","AAL22664","STM3804, yidG","putative inner membrane protein [Ensembl]. Domain of unknown function (DUF202) [Interproscan]." "AAL22665","AAL22665","STM3805, yidH","putative inner membrane protein [Ensembl]. Domain of unknown function (DUF202) [Interproscan]." "AAL22800","AAL22800","STM3956, yigI","putative PaaI protein [Ensembl]. Thioesterase superfamily [Interproscan]." "AAL22852","AAL22852","STM4013","putative membrane-associated metal-dependent hydrolase [Ensembl]. Sulfatase [Interproscan]." "AAL22855","AAL22855","STM4016, yshA","putative outer membrane protein [Ensembl]. Oligogalacturonate-specific porin protein (KdgM) [Interproscan]." "AAL22859","AAL22859","STM4020, yihR","putative aldose-1-epimerase [Ensembl]. Aldose 1-epimerase [Interproscan]." "AAL22878","AAL22878","STM4039","putative inner membrane lipoprotein [Ensembl]. Protein of unknown function (DUF3829) [Interproscan]." "AAL22888","AAL22888","STM4048, rhaS","positive regulator for rhaBAD operon [Ensembl]. Helix-turn-helix domain, AraC-like ligand binding domain [Interproscan]." "AAL22944","AAL22944","STM4104","putative 5'-nucleotidase [Ensembl]. 5'-nucleotidase, Calcineurin-like phosphoesterase [Interproscan]." "AAL23050","AAL23050","STM4226, yjbA","putative inner membrane protein [Ensembl]. Phosphate-starvation-inducible E [Interproscan]." "AAL23100","AAL23100","STM4276","putative cytoplasmic protein [Ensembl]." "AAL23142","AAL23142","STM4318","putative acetyltransferase [Ensembl]. Acetyltransferase (GNAT) domain [Interproscan]." "AAL23151","AAL23151","STM4328, yjeH","putative transporter [Ensembl]. Amino acid permease [Interproscan]." "AAL23220","AAL23220","STM4400, ytfF","putative cationic amino acid transporter [Ensembl]. EamA-like transporter family [Interproscan]." "AAL23300","AAL23300","STM4481, idnR","L-idonate regulator [Ensembl]. Bacterial regulatory proteins, Periplasmic binding protein-like domain [Interproscan]." "AAL23301","AAL23301","STM4482, idnT","GntP family L-idonate transport protein [Ensembl]. GntP family permease [Interproscan]." "AAL23333","AAL23333","STM4515, yjiJ","putative sugar transporter [Ensembl]. Uncharacterised MFS-type transporter YbfB [Interproscan]." "AAL23338","AAL23338","STM4520","putative cytoplasmic protein [Ensembl]." "AAL23366","AAL23366","STM4548, bglJ","transcriptional regulator (activator) of bgl operon [Ensembl]. Bacterial regulatory proteins [Interproscan]."