"sequence_id","alias","species","description","type"
"AAC73433","prpR, b0330","Escherichia coli","propionate catabolism operon regulatory protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Propionate catabolism activator [Interproscan].","protein_coding"
"AAC74385","pspF, b1303","Escherichia coli","psp operon transcriptional activator [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"AAC74405","tyrR, b1323","Escherichia coli","aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase [Ensembl]. PAS domain, Helix-turn-helix domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAC75280","atoC, b2220","Escherichia coli","fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AAC75544","hyfR, b2491","Escherichia coli","hydrogenase-4 transcriptional activator [Ensembl]. GAF domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAC75607","glrR, b2554","Escherichia coli","response regulator regulating glmY sRNA in two-component system with sensor protein GlrK [Ensembl]. Sigma-54 interaction domain, Response regulator receiver domain [Interproscan].","protein_coding"
"AAC75751","norR, b2709","Escherichia coli","anaerobic nitric oxide reductase DNA-binding transcriptional activator [Ensembl]. GAF domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAC75773","fhlA, b2731","Escherichia coli","formate hydrogenlyase transcriptional activator [Ensembl]. GAF domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"AAC75907","ygeV, b2869","Escherichia coli","putative sigma-54-interacting transcriptional activator [Ensembl]. PAS domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"AAC76447","rtcR, b3422","Escherichia coli","sigma 54-dependent transcriptional regulator of rtcBA expression [Ensembl]. Sigma-54 interaction domain, Regulator of RNA terminal phosphate cyclase [Interproscan].","protein_coding"
"AAC76865","glnG, b3868","Escherichia coli","fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AAC76978","zraR, b4004","Escherichia coli","fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AAL19321","STM0367, prpR","Salmonella enterica","regulator for prp operon (EBP family) [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Propionate catabolism activator [Interproscan].","protein_coding"
"AAL19603","STM0652","Salmonella enterica","putative sigma-54 dependent transcriptional regulator [Ensembl]. Sigma-54 interaction domain, Propionate catabolism activator [Interproscan].","protein_coding"
"AAL20600","STM1683, tyrR","Salmonella enterica","transcriptional regulator of aromatic amino acid biosynthesis genes (aroF, aroG, tyrA) and aromatic amino acid transport [Ensembl]. Helix-turn-helix domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAL20608","STM1691, pspF","Salmonella enterica","transcription activator [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAL21262","STM2361","Salmonella enterica","putative regulatory protein [Ensembl]. PAS fold, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"AAL21456","STM2562, yfhA","Salmonella enterica","putative transcriptional regulator of two-component regulator protein [Ensembl]. Sigma-54 interaction domain, Response regulator receiver domain [Interproscan].","protein_coding"
"AAL21719","STM2839, ygaA","Salmonella enterica","putative EBP family regulator [Ensembl]. GAF domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAL21739","STM2859, fhlA","Salmonella enterica","formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons [Ensembl]. GAF domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"AAL22383","STM3522, rtcR","Salmonella enterica","sigma N (sigma 54)-dependent regulator of rtcBA expression [Ensembl]. Sigma-54 interaction domain, Regulator of RNA terminal phosphate cyclase [Interproscan].","protein_coding"
"AAL22844","STM4005, glnG","Salmonella enterica","EBP family response regulator in two-component regulatory system with GlnL [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AGT22853","N559_1079","Klebsiella pneumoniae","sigma-54 dependent transcriptional regulator [Ensembl]. Sigma-54 interaction domain, DNA binding HTH domain, RNA polymerase sigma factor 54 interaction domain, Fis family [InterProScan].","protein_coding"
"AGT22935","N559_1166, FhlA","Klebsiella pneumoniae","formate hydrogenlyase transcriptional activator FhlA [Ensembl]. Sigma-54 interaction domain, GAF domain, RNA polymerase sigma factor 54 interaction domain [InterProScan].","protein_coding"
"AGT22959","N559_1193","Klebsiella pneumoniae","anaerobic nitric oxide reductase transcription regulator [Ensembl]. GAF domain, Sigma-54 interaction domain, RNA polymerase sigma factor 54 interaction domain [InterProScan].","protein_coding"
"AGT23137","N559_1375","Klebsiella pneumoniae","putative 2-component transcriptional regulator [Ensembl]. Response regulator receiver domain, Sigma-54 interaction domain, RNA polymerase sigma factor 54 interaction domain [InterProScan].","protein_coding"
"AGT26495","N559_4911","Klebsiella pneumoniae","fused DNA-binding response regulator [Ensembl]. Response regulator receiver domain, Sigma-54 interaction domain, DNA binding HTH domain, RNA polymerase sigma factor 54 interaction domain, Fis family [InterProScan].","protein_coding"
"AGT26682","N559_5106","Klebsiella pneumoniae","nitrogen regulation protein NR(I) [Ensembl]. Sigma-54 interaction domain, Response regulator receiver domain, RNA polymerase sigma factor 54 interaction domain, DNA binding HTH domain, Fis family [InterProScan].","protein_coding"
"AHY40231","CJ8421_05085","Campylobacter jejuni","Signal-transduction regulatory protein FlgR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AKI50171","L2625_02335","Listeria monocytogenes","sigma-54 dependent transcriptional regulator [Ensembl]. RNA polymerase sigma factor 54 interaction domain, DNA binding HTH domain [Interproscan].","protein_coding"
"AKP15094","glnG, WX61_01036","Neisseria gonorrhoeae","Nitrogen regulation protein NR(I) [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AKP15503","zraR, WX61_01457","Neisseria gonorrhoeae","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CBI66461","ntrC, HPB8_904","Helicobacter pylori","two-component system, NtrC family, response regulator [Ensembl]. Sigma-54 interaction domain, Response regulator receiver domain [Interproscan].","protein_coding"
"CCL16976","BN171_1030026","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. PAS domain, Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL17338","BN171_1440022","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL17955","BN171_1970024","Clostridioides difficile","Two-component response regulator [Ensembl]. Response regulator receiver domain, Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL18448","BN171_2340008","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19165","BN171_2900020","Clostridioides difficile","Transcriptional regulator, sigma-54 dependent [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19199","BN171_2950001","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19358","BN171_3080005","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19364","BN171_3080011","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Propionate catabolism activator, Bacterial regulatory protein, PAS fold, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19535","BN171_3220004","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19632","BN171_3330003","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19686","BN171_340003","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. PAS domain, Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19713","BN171_3410005","Clostridioides difficile","Putative sigma-54 interacting protein (fragment) [Ensembl]. Bacterial regulatory protein [Interproscan].","protein_coding"
"CCL19725","prdR, BN171_3420013","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. PAS domain, Bacterial regulatory protein, CBS domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19910","BN171_360004","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CRN65608","qseF","Pseudomonas aeruginosa","Quorum-sensing regulator protein F [Ensembl]. Sigma-54 interaction domain, Regulator of RNA terminal phosphate cyclase [Interproscan].","protein_coding"
"CRN66268","zraR_1","Pseudomonas aeruginosa","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRN70797","tyrR_1","Pseudomonas aeruginosa","Transcriptional regulatory protein TyrR [Ensembl]. PAS fold, ACT domain, Helix-turn-helix domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CRN78675","acoR_1","Pseudomonas aeruginosa","Acetoin catabolism regulatory protein [Ensembl]. GAF domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRN86585","zraR_2","Pseudomonas aeruginosa","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRN98070","norR2","Pseudomonas aeruginosa","Nitric oxide reductase transcription regulator norR2 [Ensembl]. GAF domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRO21544","zraR_3","Pseudomonas aeruginosa","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Response regulator receiver domain [Interproscan].","protein_coding"
"CRO39560","dctD_1","Pseudomonas aeruginosa","C4-dicarboxylate transport transcriptional regulatory protein DctD [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRO45240","ntrC_1","Pseudomonas aeruginosa","Nitrogen assimilation regulatory protein [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CRO45386","zraR_4","Pseudomonas aeruginosa","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CRO60964","acoR_2","Pseudomonas aeruginosa","Acetoin catabolism regulatory protein [Ensembl]. GAF domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRO96924","No alias","Pseudomonas aeruginosa","(S)-limonene 6-monooxygenase [Ensembl]. PAS fold, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRP14713","prpR_1","Pseudomonas aeruginosa","Propionate catabolism operon regulatory protein [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CRP27004","zraR_5","Pseudomonas aeruginosa","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRP41187","prpR_2","Pseudomonas aeruginosa","Propionate catabolism operon regulatory protein [Ensembl]. PAS fold, Sigma-54 interaction domain, Bacterial regulatory protein, Propionate catabolism activator [Interproscan].","protein_coding"
"CRP48388","glnG","Pseudomonas aeruginosa","Nitrogen regulation protein NR(I) [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRP50008","dctD_2","Pseudomonas aeruginosa","C4-dicarboxylate transport transcriptional regulatory protein DctD [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRP62097","rocR","Pseudomonas aeruginosa","Arginine utilization regulatory protein RocR [Ensembl]. PAS fold, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRP68728","tyrR_2","Pseudomonas aeruginosa","Transcriptional regulatory protein TyrR [Ensembl]. PAS domain, Helix-turn-helix domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CRP72464","dctD_3","Pseudomonas aeruginosa","C4-dicarboxylate transport transcriptional regulatory protein DctD [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRP73274","algB_2","Pseudomonas aeruginosa","Alginate biosynthesis transcriptional regulatory protein AlgB [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRP79684","zraR_6","Pseudomonas aeruginosa","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRP79731","ntrC_2","Pseudomonas aeruginosa","Nitrogen assimilation regulatory protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Flagellar regulatory protein FleQ [Interproscan].","protein_coding"
"EDJ91589","CGSHi22421_07457","Haemophilus influenzae","transcriptional regulatory protein [Ensembl]. Helix-turn-helix domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"KNA50400","VCV51_031426","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"KNA50402","VCV51_031428","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Flagellar regulatory protein FleQ [Interproscan].","protein_coding"
"KNA54612","VCV51_030713","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"KNA55086","VCV51_031847","Vibrio cholerae ","nitrogen regulation protein NR(I) [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"KNA55256","VCV51_033069","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"KNA57440","VCV51_032836","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"KNA58588","VCV51_031119","Vibrio cholerae ","psp operon transcriptional activator [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"KNA58956","VCV51_031243","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. GAF domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"KNA59396","VCV51_031296","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"KNA60650","VCV51_032089","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"KNA60673","VCV51_032112","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"KNA60791","VCV51_032053","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. GAF domain, Sigma-54 interaction domain [Interproscan].","protein_coding"