Heatmap: Cluster_53 (HCCA)

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Gene	BW25113,25m,0.13uM colistin	BW25113,25m,0.25uM polymyxineB	BW25113,25m,0.75uM ceftriaxone	BW25113,25m,0.75uM doxycycline	BW25113,25m,0.75uM levofloxacin	BW25113,25m,0.78uM meropenem	BW25113,25m,100uM nitroxolin	BW25113,25m,1uM ceftriaxone	BW25113,25m,1uM norfloxacin	BW25113,25m,25uM chloramphenicol	BW25113,25m,25uM globomycin	BW25113,25m,50uM clarithromycin	BW25113,25m,50uM nitrofurantoin	BW25113,25m,50uM trimethoprim	BW25113,25m,5uM mecillinam	BW25113,25m,DMSO	MG1655,WT,0m,Post-rfp kasugamycin(+)	MG1655,WT,0m,Post-rfp kasugamycin(-)	MG1655,WT,10m,Post-rfp kasugamycin(+)	MG1655,WT,15m,Post-rfp kasugamycin(+)	MG1655,WT,2m,Post-rfp kasugamycin(+)	MG1655,WT,2m,Post-rfp kasugamycin(-)	MG1655,WT,4m,Post-rfp kasugamycin(+)	MG1655,WT,4m,Post-rfp kasugamycin(-)	MG1655,WT,6m,Post-rfp kasugamycin(+)	MG1655,WT,6m,Post-rfp kasugamycin(-)	MG1655,WT,8m,Post-rfp kasugamycin(+)	MG1655,[A] mut,0m,Post-rfp kasugamycin(-)	MG1655,[A] mut,10m,Post-rfp kasugamycin(-)	MG1655,[A] mut,2m,Post-rfp kasugamycin(-)	MG1655,[A] mut,4m,Post-rfp kasugamycin(-)	MG1655,[A] mut,6m,Post-rfp kasugamycin(-)	MG1655,[A] mut,8m,Post-rfp kasugamycin(-)	WO153,M-log,actinomycin-d	WO153,M-log,bacitracin	WO153,M-log,cefotaxime	WO153,M-log,ceftriaxone	WO153,M-log,cerulenin	WO153,M-log,chloramphenicol	WO153,M-log,ciprofloxacin	WO153,M-log,colistin	WO153,M-log,d-cycloserine	WO153,M-log,dmso	WO153,M-log,doxorubicin	WO153,M-log,doxycycline	WO153,M-log,erythromycin	WO153,M-log,ethanol	WO153,M-log,fidaxomicin	WO153,M-log,flavomycin	WO153,M-log,gentamicin	WO153,M-log,isoniazid	WO153,M-log,levofloxacin	WO153,M-log,linezolid	WO153,M-log,meropenem	WO153,M-log,metronidazole	WO153,M-log,monactin	WO153,M-log,nalidixic-acid	WO153,M-log,naoh	WO153,M-log,norfloxacin	WO153,M-log,novobiocin	WO153,M-log,penicillin	WO153,M-log,phosphomycin	WO153,M-log,polymyxin	WO153,M-log,rachelmycin	WO153,M-log,ramoplanin	WO153,M-log,retapamulin	WO153,M-log,rifampicin	WO153,M-log,rifapentine	WO153,M-log,streptomycin	WO153,M-log,sulfacetamide	WO153,M-log,sulfamethoxazole	WO153,M-log,teicoplanin	WO153,M-log,teixobactin	WO153,M-log,tetracycline	WO153,M-log,thiostrepton	WO153,M-log,triclosan	WO153,M-log,trimethoprim	WO153,M-log,valinomycin	WO153,M-log,vancomycin	WO153,M-log,water	WO153,M-log,zeocin
AAC73392 (ecpE)	7.35	7.69	5.24	5.2	3.77	6.63	13.9	4.44	4.7	4.13	6.77	8.68	9.73	4.76	6.73	6.13	3.56	0.8	0.46	0.74	1.24	0.69	0.89	0.36	0.71	0.28	0.78	4.15	2.0	2.37	1.32	1.89	1.09	8.05	12.08	6.81	9.9	19.96	12.59	9.08	9.19	6.89	11.26	9.51	14.99	16.98	8.69	9.89	8.71	62.51	13.17	24.11	8.63	8.19	19.69	8.87	9.91	15.2	7.57	4.73	6.31	11.51	15.1	9.46	4.96	13.98	15.8	19.07	15.23	30.48	9.45	11.87	7.65	15.01	7.42	14.79	11.63	18.57	5.96	11.34	29.51
AAC73393 (ecpD)	6.92	8.99	5.64	5.31	5.07	5.51	10.4	5.3	4.0	6.1	6.25	8.02	9.69	7.47	5.8	5.7	2.81	0.98	0.58	0.87	1.02	0.48	0.89	0.31	0.69	0.18	0.7	3.93	3.14	2.98	2.27	2.49	2.92	9.67	11.07	6.77	6.74	14.08	9.72	8.31	10.66	7.48	10.4	7.08	14.04	9.88	8.47	8.23	7.09	24.68	10.14	19.52	8.27	6.66	17.0	8.04	10.55	11.96	6.31	4.19	6.05	12.98	14.27	9.4	4.76	9.14	12.26	17.4	10.73	24.62	8.3	13.55	7.85	8.33	6.74	11.37	10.39	16.68	5.06	10.5	25.43
AAC73394 (ecpC)	2.81	3.33	2.04	2.46	2.22	2.6	5.24	2.18	1.69	2.03	2.71	3.19	4.12	2.87	2.16	2.35	0.89	0.91	0.26	0.29	0.55	0.36	0.36	0.24	0.27	0.35	0.28	1.38	0.76	0.98	0.65	0.78	0.86	6.25	8.67	2.67	3.28	6.31	4.63	3.08	4.29	2.99	4.28	1.7	4.7	3.78	2.85	3.48	4.24	18.59	2.81	22.56	3.09	2.85	7.4	4.25	4.12	4.1	2.69	3.11	2.15	4.56	6.23	4.98	1.86	4.81	5.26	14.79	6.46	7.9	4.25	6.68	2.91	2.97	3.98	4.52	4.04	11.55	2.0	4.62	15.3

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)