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Heatmap: Cluster_55 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
BW25113,25m,0.13uM colistin
BW25113,25m,0.25uM polymyxineB
BW25113,25m,0.75uM ceftriaxone
BW25113,25m,0.75uM doxycycline
BW25113,25m,0.75uM levofloxacin
BW25113,25m,0.78uM meropenem
BW25113,25m,100uM nitroxolin
BW25113,25m,1uM ceftriaxone
BW25113,25m,1uM norfloxacin
BW25113,25m,25uM chloramphenicol
BW25113,25m,25uM globomycin
BW25113,25m,50uM clarithromycin
BW25113,25m,50uM nitrofurantoin
BW25113,25m,50uM trimethoprim
BW25113,25m,5uM mecillinam
BW25113,25m,DMSO
MG1655,WT,0m,Post-rfp kasugamycin(+)
MG1655,WT,0m,Post-rfp kasugamycin(-)
MG1655,WT,10m,Post-rfp kasugamycin(+)
MG1655,WT,15m,Post-rfp kasugamycin(+)
MG1655,WT,2m,Post-rfp kasugamycin(+)
MG1655,WT,2m,Post-rfp kasugamycin(-)
MG1655,WT,4m,Post-rfp kasugamycin(+)
MG1655,WT,4m,Post-rfp kasugamycin(-)
MG1655,WT,6m,Post-rfp kasugamycin(+)
MG1655,WT,6m,Post-rfp kasugamycin(-)
MG1655,WT,8m,Post-rfp kasugamycin(+)
MG1655,[A] mut,0m,Post-rfp kasugamycin(-)
MG1655,[A] mut,10m,Post-rfp kasugamycin(-)
MG1655,[A] mut,2m,Post-rfp kasugamycin(-)
MG1655,[A] mut,4m,Post-rfp kasugamycin(-)
MG1655,[A] mut,6m,Post-rfp kasugamycin(-)
MG1655,[A] mut,8m,Post-rfp kasugamycin(-)
WO153,M-log,actinomycin-d
WO153,M-log,bacitracin
WO153,M-log,cefotaxime
WO153,M-log,ceftriaxone
WO153,M-log,cerulenin
WO153,M-log,chloramphenicol
WO153,M-log,ciprofloxacin
WO153,M-log,colistin
WO153,M-log,d-cycloserine
WO153,M-log,dmso
WO153,M-log,doxorubicin
WO153,M-log,doxycycline
WO153,M-log,erythromycin
WO153,M-log,ethanol
WO153,M-log,fidaxomicin
WO153,M-log,flavomycin
WO153,M-log,gentamicin
WO153,M-log,isoniazid
WO153,M-log,levofloxacin
WO153,M-log,linezolid
WO153,M-log,meropenem
WO153,M-log,metronidazole
WO153,M-log,monactin
WO153,M-log,nalidixic-acid
WO153,M-log,naoh
WO153,M-log,norfloxacin
WO153,M-log,novobiocin
WO153,M-log,penicillin
WO153,M-log,phosphomycin
WO153,M-log,polymyxin
WO153,M-log,rachelmycin
WO153,M-log,ramoplanin
WO153,M-log,retapamulin
WO153,M-log,rifampicin
WO153,M-log,rifapentine
WO153,M-log,streptomycin
WO153,M-log,sulfacetamide
WO153,M-log,sulfamethoxazole
WO153,M-log,teicoplanin
WO153,M-log,teixobactin
WO153,M-log,tetracycline
WO153,M-log,thiostrepton
WO153,M-log,triclosan
WO153,M-log,trimethoprim
WO153,M-log,valinomycin
WO153,M-log,vancomycin
WO153,M-log,water
WO153,M-log,zeocin
AAC73401 (insE1)
 15.02 16.94 13.99 16.06 14.08 16.75 37.03 11.59 12.82 18.13 14.06 20.16 25.01 19.12 14.18 16.36 10.44 4.91 3.14 2.19 7.3 2.51 6.67 1.96 3.91 1.34 4.06 13.1 6.19 9.37 7.87 6.06 5.88 35.07 20.91 18.41 23.52 30.73 24.27 22.85 24.4 17.6 29.51 8.36 51.72 23.0 18.62 23.64 24.25 92.82 27.52 61.35 26.27 24.26 35.47 40.1 33.33 43.35 22.41 13.62 14.66 41.52 47.81 21.7 18.63 27.18 24.89 23.2 41.07 99.36 19.87 33.8 19.68 21.53 17.07 28.16 27.19 23.55 25.97 27.16 75.77
AAC73402 (insF1)
 7.72 9.56 9.0 10.84 6.31 8.42 15.49 5.5 5.27 11.12 8.21 14.44 13.79 13.89 8.19 8.44 6.43 3.17 2.38 1.95 6.68 2.78 4.9 1.33 4.04 0.88 3.21 7.8 14.17 15.94 16.6 11.31 17.63 12.61 11.02 16.79 15.45 22.83 15.24 14.2 19.47 25.2 20.15 11.25 21.34 22.26 21.5 17.67 24.46 33.68 25.59 45.83 13.67 18.35 20.31 16.83 14.7 19.93 14.67 5.54 10.25 24.41 28.31 19.0 8.44 19.42 15.79 29.08 20.24 54.3 33.09 13.58 14.73 14.98 14.45 22.63 14.87 14.22 8.68 20.35 47.56
AAC73475 (insF2)
 7.72 9.56 9.0 10.84 6.31 8.42 15.49 5.5 5.27 11.12 8.21 14.44 13.79 13.89 8.19 8.44 6.43 3.17 2.38 1.95 6.68 2.78 4.9 1.33 4.04 0.88 3.21 7.8 14.17 15.94 16.6 11.31 17.63 12.61 11.02 16.79 15.45 22.83 15.24 14.2 19.47 25.2 20.15 11.25 21.34 22.26 21.5 17.67 24.46 33.68 25.59 45.83 13.67 18.35 20.31 16.83 14.7 19.93 14.67 5.54 10.25 24.41 28.31 19.0 8.44 19.42 15.79 29.08 20.24 54.3 33.09 13.58 14.73 14.98 14.45 22.63 14.87 14.22 8.68 20.35 47.56
AAC73476 (insE2)
 15.02 16.94 13.99 16.06 14.08 16.75 37.03 11.59 12.82 18.13 14.06 20.16 25.01 19.12 14.18 16.36 10.44 4.91 3.14 2.19 7.3 2.51 6.67 1.96 3.91 1.34 4.06 13.1 6.19 9.37 7.87 6.06 5.88 35.07 20.91 18.41 23.52 30.73 24.27 22.85 24.4 17.6 29.51 8.36 51.72 23.0 18.62 23.64 24.25 92.82 27.52 61.35 26.27 24.26 35.47 40.1 33.33 43.35 22.41 13.62 14.66 41.52 47.81 21.7 18.63 27.18 24.89 23.2 41.07 99.36 19.87 33.8 19.68 21.53 17.07 28.16 27.19 23.55 25.97 27.16 75.77
AAC73641 (insE3)
 15.02 16.94 13.99 16.06 14.08 16.75 37.03 11.59 12.82 18.13 14.06 20.16 25.01 19.12 14.18 16.36 10.44 4.91 3.14 2.19 7.3 2.51 6.67 1.96 3.91 1.34 4.06 13.1 6.19 9.37 7.87 6.06 5.88 35.07 20.91 18.41 23.52 30.73 24.27 22.85 24.4 17.6 29.51 8.36 51.72 23.0 18.62 23.64 24.25 92.82 27.52 61.35 26.27 24.26 35.47 40.1 33.33 43.35 22.41 13.62 14.66 41.52 47.81 21.7 18.63 27.18 24.89 23.2 41.07 99.36 19.87 33.8 19.68 21.53 17.07 28.16 27.19 23.55 25.97 27.16 75.77
AAC73642 (insF3)
 7.72 9.56 9.0 10.84 6.31 8.42 15.49 5.5 5.27 11.12 8.21 14.44 13.79 13.89 8.19 8.44 6.43 3.17 2.38 1.95 6.68 2.78 4.9 1.33 4.04 0.88 3.21 7.8 14.17 15.94 16.6 11.31 17.63 12.61 11.02 16.79 15.45 22.83 15.24 14.2 19.47 25.2 20.15 11.25 21.34 22.26 21.5 17.67 24.46 33.68 25.59 45.83 13.67 18.35 20.31 16.83 14.7 19.93 14.67 5.54 10.25 24.41 28.31 19.0 8.44 19.42 15.79 29.08 20.24 54.3 33.09 13.58 14.73 14.98 14.45 22.63 14.87 14.22 8.68 20.35 47.56
AAC74111 (insF4)
 7.72 9.56 9.0 10.84 6.31 8.42 15.49 5.5 5.27 11.12 8.21 14.44 13.79 13.89 8.19 8.44 6.43 3.17 2.38 1.95 6.68 2.78 4.9 1.33 4.04 0.88 3.21 7.8 14.17 15.94 16.6 11.31 17.63 12.61 11.02 16.79 15.45 22.83 15.24 14.2 19.47 25.2 20.15 11.25 21.34 22.26 21.5 17.67 24.46 33.68 25.59 45.83 13.67 18.35 20.31 16.83 14.7 19.93 14.67 5.54 10.25 24.41 28.31 19.0 8.44 19.42 15.79 29.08 20.24 54.3 33.09 13.58 14.73 14.98 14.45 22.63 14.87 14.22 8.68 20.35 47.56
AAC74112 (insE4)
 15.02 16.94 13.99 16.06 14.08 16.75 37.03 11.59 12.82 18.13 14.06 20.16 25.01 19.12 14.18 16.36 10.44 4.91 3.14 2.19 7.3 2.51 6.67 1.96 3.91 1.34 4.06 13.1 6.19 9.37 7.87 6.06 5.88 35.07 20.91 18.41 23.52 30.73 24.27 22.85 24.4 17.6 29.51 8.36 51.72 23.0 18.62 23.64 24.25 92.82 27.52 61.35 26.27 24.26 35.47 40.1 33.33 43.35 22.41 13.62 14.66 41.52 47.81 21.7 18.63 27.18 24.89 23.2 41.07 99.36 19.87 33.8 19.68 21.53 17.07 28.16 27.19 23.55 25.97 27.16 75.77
AAC75149 (insE5)
 15.02 16.94 13.99 16.06 14.08 16.75 37.03 11.59 12.82 18.13 14.06 20.16 25.01 19.12 14.18 16.36 10.44 4.91 3.14 2.19 7.3 2.51 6.67 1.96 3.91 1.34 4.06 13.1 6.19 9.37 7.87 6.06 5.88 35.07 20.91 18.41 23.52 30.73 24.27 22.85 24.4 17.6 29.51 8.36 51.72 23.0 18.62 23.64 24.25 92.82 27.52 61.35 26.27 24.26 35.47 40.1 33.33 43.35 22.41 13.62 14.66 41.52 47.81 21.7 18.63 27.18 24.89 23.2 41.07 99.36 19.87 33.8 19.68 21.53 17.07 28.16 27.19 23.55 25.97 27.16 75.77
AAC75150 (insF5)
 7.72 9.56 9.0 10.84 6.31 8.42 15.49 5.5 5.27 11.12 8.21 14.44 13.79 13.89 8.19 8.44 6.43 3.17 2.38 1.95 6.68 2.78 4.9 1.33 4.04 0.88 3.21 7.8 14.17 15.94 16.6 11.31 17.63 12.61 11.02 16.79 15.45 22.83 15.24 14.2 19.47 25.2 20.15 11.25 21.34 22.26 21.5 17.67 24.46 33.68 25.59 45.83 13.67 18.35 20.31 16.83 14.7 19.93 14.67 5.54 10.25 24.41 28.31 19.0 8.44 19.42 15.79 29.08 20.24 54.3 33.09 13.58 14.73 14.98 14.45 22.63 14.87 14.22 8.68 20.35 47.56

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)