Heatmap: Cluster_13 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
10P129H1,ModA15 OFF
10P129H1,ModA15 ON
10P129H1,ModA15ON
1209,ModA9 OFF
1209,ModA9 ON
1209,ModA9ON
477,ModA5 OFF
477,ModA5 OFF
477,ModA5 ON
84P36H1,ModA18 OFF
84P36H1,ModA18 OFF
84P36H1,ModA18 ON
84P36H1,ModA18ON
86-028NP,nasopharynx
86-028NP,rpsL,nasopharynx
86-028NP,rspL/fur-,nasopharynx
86-028NP,rspL/pT-fur,nasopharynx
C486,ModA4 OFF
C486,ModA4 ON
C486,ModA4ON
GE47,WT,sBHI,37C
GE47,WT,sBHI,42C
R2866,ModA10 OFF
R2866,ModA10 OFF
R2866,ModA10 OFF
R2866,ModA10 ON
R2866,ModA10ON
RdKW20,BHI
RdKW20,HI0628-,mid-log,50µM beclomethasone
RdKW20,HI0628-,mid-log,DMSO
RdKW20,HI0659-,MIV
RdKW20,HI0659-,MM
RdKW20,HI0659-/HI0660-,MIV
RdKW20,HI0660-,MIV
RdKW20,MIV
RdKW20,WT
RdKW20,WT,mid-log,50µM beclomethasone
RdKW20,WT,mid-log,DMSO
RdKW20,beclomethasone
RdKW20,comN-,MIV
RdKW20,crp-,BHI
RdKW20,crp-,MIV
RdKW20,hfq-,MIV
RdKW20,murE749,BHI
RdKW20,prednisolone
RdKW20,rpoD753,BHI
RdKW20,sxy-,BHI
RdKW20,sxy-,MIV
RdKW20,sxy-1,BHI
bronchoalveolar lavage
nasopharynx
EDJ89881 (CGSHi22421_05830)
- - - 2.16 2.57 2.35 0.83 0.44 0.36 - - - - - - - - 1.64 1.53 1.37 - - 2.19 1.82 2.08 1.94 2.2 - - - - - - - - - - - - - - - - - - - - - - -0.4 0.0
EDJ89903 (CGSHi22421_00537)
0.45 1.51 0.55 0.05 -0.96 -1.15 - - - 2.85 2.37 2.1 2.28 - - - - - - - 2.63 3.26 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.62 1.55
EDJ89931 (CGSHi22421_05662)
-4.88 -4.51 -3.88 2.81 2.32 2.12 -4.21 -4.85 -4.49 -3.98 -1.98 -2.7 -2.49 - -0.42 3.63 3.02 -3.06 -3.64 -4.06 - - - - - - - -1.05 -2.42 -3.13 -1.67 -1.8 -1.38 -1.83 -1.27 -0.98 -3.9 -5.4 0.57 -1.67 -0.88 -1.33 -2.2 -1.18 0.16 -0.75 -1.15 -1.36 -1.09 0.27 0.63
EDJ89932 (CGSHi22421_05667)
-1.94 -1.71 -1.66 1.67 -0.49 -0.6 -1.38 -1.67 -1.55 -1.16 -1.03 -1.0 -1.22 - -0.38 2.98 2.41 -2.27 -2.09 -1.77 -0.19 0.23 1.66 1.56 1.47 1.18 1.26 -1.26 -0.43 -0.29 -0.95 -1.38 -1.06 -0.98 -1.25 -1.96 -0.3 -0.65 -0.66 -1.43 -1.43 -1.22 -1.54 -1.16 -1.21 -1.45 -1.34 -1.19 -1.04 -0.42 -0.14
EDJ89933 (CGSHi22421_05672)
-1.71 -1.41 -1.37 2.22 0.09 0.08 -1.32 -1.3 -1.2 -1.16 -1.14 -1.13 -1.27 - -0.62 2.66 2.13 -2.16 -2.0 -2.06 0.25 0.41 1.72 1.55 1.32 1.48 1.56 -1.57 -0.85 -0.34 -2.01 -2.96 -1.75 -1.8 -2.11 -1.76 -0.36 -0.3 -0.81 -1.78 -1.6 -1.98 -2.45 -1.35 -1.46 -1.77 -1.59 -2.04 -1.39 0.33 0.54
EDJ89934 (CGSHi22421_05677)
-2.16 -1.77 -1.79 2.07 0.15 0.17 -0.85 -0.89 -0.77 -1.26 -1.24 -1.24 -1.32 - -0.59 2.36 1.67 -1.81 -1.71 -1.64 -0.41 -0.64 1.73 1.64 1.57 1.64 1.67 -1.19 -0.31 -0.09 -1.53 -1.78 -1.24 -1.25 -1.59 -1.39 -0.67 -0.39 -0.53 -1.38 -1.17 -1.35 -1.67 -1.17 -1.12 -1.27 -1.13 -1.47 -1.09 0.47 0.53
EDJ89968 (CGSHi22421_07678)
- - - 0.95 1.63 3.46 - 2.43 2.42 - - - - - - - - - - - - - - 2.57 - 3.61 2.59 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ89993 (CGSHi22421_00712)
- - - 3.82 4.16 4.25 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
EDJ89994 (CGSHi22421_00717)
- - - 3.8 4.15 4.28 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
EDJ89998 (CGSHi22421_00737)
- - - 4.27 4.07 3.87 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -1.66 -
EDJ90002 (CGSHi22421_00757)
- - - 4.11 3.88 4.24 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90003 (CGSHi22421_00762)
- - - 4.07 3.25 4.63 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90004 (CGSHi22421_00767)
- - - 4.23 3.59 4.33 - - - - - - - - - - - - -7.43 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90144 (CGSHi22421_03453)
-1.05 -0.9 0.08 3.13 3.21 3.06 - - - - - - - - - - - - - -3.14 -2.14 -1.86 - - - - - -0.96 1.92 1.93 -1.89 -2.77 -1.62 -2.03 -1.91 -0.39 0.99 0.89 0.66 -1.51 -0.85 -3.02 -3.39 -0.8 -0.29 -1.5 -0.78 -1.74 -1.31 0.7 -0.74
EDJ90147 (CGSHi22421_05942)
-0.04 0.72 0.52 2.86 2.85 2.73 -4.88 -4.29 -4.41 -3.57 -3.38 -3.45 -3.48 -0.06 -1.21 -0.81 -1.5 2.75 2.49 2.58 -3.16 -2.89 -3.87 -4.41 -4.24 -4.32 -3.58 -3.47 -4.59 -4.4 -1.01 -0.7 -3.8 -3.46 -1.61 -3.76 -5.81 -5.12 -3.78 -3.44 -3.12 -3.69 -4.06 -3.82 -4.26 -3.92 -3.37 -1.84 -3.65 -1.69 -0.18
EDJ90164 (CGSHi22421_06027)
-2.13 -2.49 -2.41 2.65 1.86 1.74 -1.45 -1.41 -1.32 -0.76 -0.7 -0.49 -0.52 -1.37 0.05 2.01 -0.39 0.92 0.51 0.46 -1.14 -1.16 -1.2 -1.08 -1.08 -1.13 -1.14 -1.09 1.02 1.29 -0.92 -1.05 -1.43 -1.19 -1.03 0.08 0.54 0.77 -0.86 -1.32 -1.44 -1.63 -1.78 -1.38 0.42 -0.01 -1.5 -1.44 -0.18 -0.62 -0.1
EDJ90398 (CGSHi22421_01612)
- - - 1.71 2.88 2.72 - -12.69 - - - - - 2.82 -1.07 -1.0 -0.87 -3.02 -2.93 -2.99 -0.14 -1.13 -0.74 -0.98 -1.1 -0.85 -0.87 -1.07 1.2 0.56 -1.05 -0.79 -0.17 -0.4 -1.09 -0.77 1.47 -0.43 -1.34 -0.03 -1.44 -1.06 0.33 -1.0 0.65 -1.6 -1.58 -0.89 -1.45 0.33 -0.19
EDJ90399 (CGSHi22421_01617)
- - - 1.43 2.59 2.33 - - - - - - - 1.41 -0.48 -0.5 -0.47 -2.0 -1.99 -1.88 1.09 0.36 -0.59 -1.02 -1.39 -0.78 -0.68 -0.85 1.13 0.43 -0.52 0.02 0.18 -0.11 -0.57 -0.71 1.83 0.09 -1.2 0.22 -0.7 -0.24 0.57 -0.74 0.39 -1.0 -0.98 -0.58 -1.05 0.85 0.42
EDJ90401 (CGSHi22421_01627)
- - - 4.03 4.2 4.03 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90423 (CGSHi22421_02456)
-1.15 -0.59 -1.23 0.58 1.32 1.77 1.47 1.45 1.64 -0.95 -1.12 -1.78 -1.4 - - - - 2.3 2.39 2.23 - - 1.49 0.9 1.28 1.42 0.57 - -0.52 0.62 - - -6.08 -5.44 -4.39 -2.74 0.24 0.25 -1.94 -3.82 - - -5.08 -4.23 -2.68 -4.57 - -4.72 -4.94 -2.89 -4.29
EDJ90587 (CGSHi22421_01242)
-1.14 -1.3 -1.29 0.4 0.55 0.44 0.09 0.01 -0.13 -0.57 -0.73 -0.88 -0.65 1.06 0.45 0.01 -0.02 -0.16 0.4 0.53 -0.0 -0.36 -0.31 -0.8 -0.91 0.26 0.1 -0.29 0.99 0.96 0.21 0.55 -0.07 -0.1 0.0 -0.12 0.31 0.23 -0.69 -0.15 0.09 0.12 -0.19 -0.2 -0.71 -0.21 -0.41 -0.1 -0.17 -0.03 0.04
EDJ90588 (CGSHi22421_01247)
-0.4 -0.61 -0.57 1.31 0.56 0.55 -0.31 -0.36 -0.46 -0.46 -0.48 -0.28 -0.3 2.13 0.66 1.84 0.48 0.24 0.59 0.56 0.13 -0.55 -0.5 -0.99 -1.23 -0.55 -0.36 -1.17 1.28 1.53 -1.86 -1.74 -1.08 -1.28 -1.84 -1.01 0.39 0.79 -1.23 -1.18 -1.28 -0.91 -1.32 -1.06 -0.82 -0.54 -1.34 -1.67 -0.56 -0.33 -0.07
EDJ90683 (lysS)
-0.14 -0.08 -0.08 1.04 1.98 1.93 0.07 0.07 -0.07 0.38 0.35 0.41 0.48 - -2.21 -13.06 -3.18 0.01 0.36 0.34 -0.84 -0.39 -0.5 -0.56 -0.61 -0.43 -0.43 -0.2 0.01 0.06 0.15 -0.07 -0.55 -0.52 -0.37 -0.22 -0.17 -0.19 -0.29 -0.46 -0.1 -0.55 -0.65 -0.19 0.09 -0.34 -0.22 -0.2 -0.25 0.22 0.36
EDJ90910 (CGSHi22421_03638)
- - - 4.0 3.89 3.76 - -4.29 -3.36 - - - - - - - - -2.84 -3.42 -2.72 - - -1.5 -4.2 -2.65 -1.35 -2.58 -6.46 -2.67 -3.35 -0.91 -0.61 -1.57 -0.86 -1.92 -3.31 -4.34 -4.45 -2.98 -1.49 -3.77 -1.62 -0.97 -4.95 -2.95 - - -1.18 - -4.5 -4.94
EDJ90917 (CGSHi22421_03673)
-0.31 -0.4 -0.47 3.54 2.32 2.18 - - - - - - - - - - - - - - - - 2.59 2.63 2.69 1.74 1.73 - - - - - - - - - - - - - - - - - - - - - - -0.05 0.3
EDJ90918 (CGSHi22421_03678)
-0.3 -0.52 -0.52 3.93 3.27 3.23 - - - - - - - - - - - - - - - - 1.73 1.66 1.57 0.99 0.84 - - - - - - - - - - - - - - - - - - - - - - -0.91 -0.47
EDJ90919 (CGSHi22421_03683)
-0.58 -0.52 -0.48 4.17 3.06 2.92 - - - - - - - - - - - -12.64 -12.02 - - - 1.8 1.62 1.53 0.96 1.05 - - - - - - - - - - - - - - - - - - - - - - -0.52 -0.1
EDJ90920 (CGSHi22421_03688)
-1.39 -1.9 -1.5 4.34 3.02 2.86 - - - - - - - - - - - - - - - - 1.6 1.44 1.4 1.09 0.92 - - - - - - - - - - - - - - - - - - - - - - 0.09 -0.04
EDJ90921 (CGSHi22421_03693)
-9.57 -9.21 - 4.06 3.38 3.4 - - - - - - - - - - - - - - - - 1.39 1.51 1.5 1.09 0.87 - - - - - - - - - - - - - - - - - - - - - - -0.64 -1.04
EDJ90948 (lolA)
- - - 3.64 3.21 3.37 - - -1.43 - - - - - - - - -1.43 - - - - 2.75 2.31 - 1.35 1.93 - - - - - - - - - - - - - - - - - - - - - - -2.47 -
EDJ91050 (CGSHi22421_02971)
- - - 2.85 3.39 3.53 2.57 2.92 1.83 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.98 1.43
EDJ91109 (CGSHi22421_10222)
- - - 2.19 2.47 3.66 3.21 2.91 2.07 - - - - - - - - -0.48 -1.29 - - - 0.79 0.35 0.31 -0.03 -0.04 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ91325 (CGSHi22421_04458)
0.54 0.18 0.17 0.19 0.88 0.91 0.01 -0.03 -0.21 -0.27 -0.21 -0.19 -0.19 - 0.09 0.32 -0.17 0.16 0.78 0.71 0.05 1.05 -0.16 -0.03 0.08 -0.28 -0.25 -0.58 0.15 0.2 -0.02 -0.0 -0.54 -0.32 -0.24 -0.53 -0.29 -0.38 0.26 -0.57 -0.36 -0.31 -0.69 -0.55 0.12 -0.62 -0.52 -0.25 -0.52 0.35 0.29
EDJ91452 (CGSHi22421_06772)
-3.16 - - 3.37 2.97 3.49 - -2.77 - - - - - - - - -3.68 3.23 2.0 2.56 - - - - - - - -3.08 - - -2.58 - -3.62 - -3.84 - - - -3.12 -2.0 -0.3 -2.86 - - -3.03 - - - - -3.38 -3.57
EDJ91459 (aspA)
-2.09 -4.02 -4.41 2.18 2.11 2.15 0.06 0.16 -1.31 -2.34 -2.64 -1.66 -1.72 -4.88 -8.37 -6.54 -10.7 -2.0 -1.3 -1.76 - - 0.99 1.08 1.38 1.52 1.23 -2.44 -1.21 -0.9 -0.24 1.24 -0.0 0.35 0.23 -0.96 2.21 1.17 -0.68 0.14 -4.22 -3.52 -0.61 -3.22 0.27 -1.7 -3.15 0.04 -2.64 -2.57 -3.05
EDJ91510 (CGSHi22421_07062)
-0.26 -0.63 -0.6 0.36 0.59 0.58 -0.14 -0.19 -0.3 -0.45 -0.5 -0.39 -0.22 1.34 0.82 0.87 0.66 -0.11 -0.56 -0.51 0.93 0.31 -0.39 -0.75 -0.86 -0.68 -0.58 -0.53 0.58 0.5 0.3 0.72 -0.44 -0.27 -0.29 0.34 -0.28 0.05 -0.22 -0.36 -0.54 -1.1 -0.22 -0.66 -0.52 -0.66 -0.54 -0.06 -0.59 0.38 0.42
EDJ91511 (CGSHi22421_07067)
-0.3 -0.77 -0.78 0.08 0.24 0.34 -0.32 -0.39 -0.5 -0.56 -0.54 -0.45 -0.4 1.04 0.47 0.43 0.25 -0.33 -0.88 -0.98 0.59 -0.1 -0.47 -0.89 -1.21 -0.61 -0.47 0.01 1.07 1.1 0.15 0.31 0.1 0.07 0.03 -0.03 -0.0 0.57 -0.74 0.21 -0.13 -0.62 0.2 0.03 -0.96 -0.13 0.0 0.19 -0.01 0.51 0.46
EDJ91512 (CGSHi22421_07072)
-0.4 -0.75 -0.68 0.62 0.9 0.77 -0.13 -0.14 -0.17 -0.38 -0.42 -0.39 -0.22 1.16 0.51 0.71 0.27 0.13 -0.46 -0.44 0.19 -0.43 -0.75 -1.13 -1.25 -0.83 -0.83 -0.37 0.71 0.68 0.46 0.96 -0.22 -0.05 -0.07 0.08 0.04 0.29 -0.59 -0.04 -0.47 -1.03 -0.19 -0.45 -0.49 -0.51 -0.35 0.19 -0.37 0.35 0.38
EDJ91513 (CGSHi22421_07077)
-0.02 -0.32 -0.33 0.14 0.2 0.39 -0.34 -0.41 -0.35 -0.19 -0.13 0.04 -0.03 0.52 0.42 0.55 0.09 -0.15 -0.71 -0.81 -0.78 -1.2 -0.54 -0.71 -0.63 -0.55 -0.64 -0.45 1.0 0.99 0.61 0.8 -0.21 0.06 -0.16 0.26 0.75 0.95 -0.13 -0.15 -0.69 -0.83 -0.22 -0.46 0.26 -0.55 -0.52 0.14 -0.52 0.34 0.32
EDJ91525 (CGSHi22421_07137)
- - - 1.42 0.83 2.52 2.38 2.05 2.14 - - - - 0.54 -3.49 -3.68 -3.51 2.01 1.84 1.62 - - 1.43 1.32 0.77 1.24 1.37 -3.24 -2.43 -3.95 - - -3.96 -3.38 -5.0 -4.34 -1.05 -2.51 -5.28 -3.27 -2.46 -2.35 -2.7 -3.15 -5.2 -2.92 -2.0 -3.53 -3.67 -4.56 -2.58
EDJ91628 (CGSHi22421_07652)
1.6 1.08 0.96 3.2 4.03 4.12 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.42 -1.95
EDJ91631 (CGSHi22421_07667)
-5.7 - - 2.73 3.81 3.64 -0.13 0.21 -0.46 0.3 0.0 -0.53 0.24 - - - - -0.03 0.2 0.4 - - 0.13 0.11 0.66 0.15 0.5 - - -3.96 -4.26 - -5.48 - -4.93 -5.34 -3.82 - -5.29 -5.4 - - - -5.52 - -4.6 -3.92 -5.97 -5.62 -1.52 -1.42
EDJ91674 (CGSHi22421_07963)
-0.6 -0.52 -0.81 0.68 1.76 1.73 0.11 0.12 0.3 0.07 -0.29 -0.46 -0.29 - -1.63 - -0.98 0.83 1.19 1.1 0.35 -0.01 0.02 -0.14 -0.71 0.13 0.31 -1.0 -0.09 -0.52 -0.21 -0.07 -0.76 -0.44 -0.43 0.94 -0.61 -1.39 0.21 -0.51 -0.35 -0.37 -0.8 -0.8 0.09 -0.89 -0.45 -0.54 -0.82 0.46 0.34
EDJ91714 (CGSHi22421_08163)
- - -5.79 1.45 2.01 2.58 - - - 1.66 1.66 2.15 1.89 - - - - 1.46 2.05 1.57 2.23 2.32 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.15 1.0
EDJ91715 (CGSHi22421_08168)
-3.07 -2.49 -5.14 2.62 3.44 3.49 - - - -0.48 -0.7 -0.42 -0.88 - - - - 1.92 2.37 2.22 -0.2 -0.23 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.1 1.22
EDJ91717 (CGSHi22421_08178)
-1.16 -2.79 -1.74 1.28 3.1 2.64 - - - 0.97 0.62 -1.78 0.04 - - - - 2.95 3.02 3.56 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -2.4 -2.13
EDJ91783 (CGSHi22421_08508)
0.74 0.94 0.99 1.83 1.56 1.21 -0.01 -0.25 -0.49 -0.62 -0.32 -0.44 -0.37 - -0.42 - 0.11 -0.24 0.11 0.08 0.96 1.21 -0.45 -0.47 -1.3 -0.5 -0.54 -0.75 -0.57 -0.44 0.04 -0.65 0.15 -0.01 -0.01 0.06 -0.84 -0.84 -0.35 -0.44 -0.52 -0.55 -0.4 -0.88 -0.4 -0.12 -0.39 0.11 -0.99 -0.26 -0.34
EDJ91784 (CGSHi22421_08513)
0.6 0.8 0.8 1.13 0.53 0.49 0.35 0.27 -0.09 -0.12 0.19 0.13 0.19 - -0.86 - -0.41 -0.08 0.31 0.57 1.48 1.31 -0.14 -0.53 -1.32 -0.59 -0.17 -0.43 0.03 -0.24 -0.72 -0.33 0.24 -0.31 -0.33 -0.16 -0.18 -0.71 -0.73 -0.19 -0.28 0.14 -0.51 -0.16 -0.95 -0.34 -0.39 -0.21 -0.46 -0.15 -0.44
EDJ91785 (CGSHi22421_08518)
1.28 1.22 1.14 0.72 0.66 0.19 -0.29 -0.37 -0.65 -0.33 -0.31 -0.49 -0.13 - -1.31 -8.96 -0.34 0.35 0.62 0.64 0.85 0.6 -0.18 -0.03 -0.05 -0.04 -0.18 -0.69 0.31 0.37 -1.19 -0.42 0.55 -0.01 -0.54 -0.54 -0.11 -0.0 -0.97 0.1 0.0 0.27 0.1 -0.43 -0.89 -0.1 -0.64 -0.21 -0.69 -0.58 -0.6
EDJ91786 (CGSHi22421_08523)
1.81 1.77 1.71 0.35 0.13 -0.06 -0.41 -0.56 -0.68 -0.19 -0.28 -0.21 -0.06 - -1.99 - -1.91 -0.33 -0.13 -0.14 0.5 0.63 -0.07 -0.03 -0.29 -0.12 -0.05 -0.44 0.1 0.13 -0.58 -0.02 0.62 0.05 -0.52 -0.47 -0.2 -0.44 -0.55 0.19 -0.05 0.2 -0.18 -0.34 -0.21 0.01 -0.43 -0.31 -0.49 -0.63 -0.67
EDJ91866 (CGSHi22421_08923)
- - - 2.72 1.85 2.65 1.62 1.72 1.01 - - - - - - - - -0.08 2.12 - - - - - - 4.12 1.8 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ91930 (CGSHi22421_09243)
- - - 3.35 - - - - 3.22 - - - - - - - - - - - - - - 4.98 - - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.