Heatmap: Cluster_16 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
10P129H1,ModA15 OFF
10P129H1,ModA15 ON
10P129H1,ModA15ON
1209,ModA9 OFF
1209,ModA9 ON
1209,ModA9ON
477,ModA5 OFF
477,ModA5 OFF
477,ModA5 ON
84P36H1,ModA18 OFF
84P36H1,ModA18 OFF
84P36H1,ModA18 ON
84P36H1,ModA18ON
86-028NP,nasopharynx
86-028NP,rpsL,nasopharynx
86-028NP,rspL/fur-,nasopharynx
86-028NP,rspL/pT-fur,nasopharynx
C486,ModA4 OFF
C486,ModA4 ON
C486,ModA4ON
GE47,WT,sBHI,37C
GE47,WT,sBHI,42C
R2866,ModA10 OFF
R2866,ModA10 OFF
R2866,ModA10 OFF
R2866,ModA10 ON
R2866,ModA10ON
RdKW20,BHI
RdKW20,HI0628-,mid-log,50µM beclomethasone
RdKW20,HI0628-,mid-log,DMSO
RdKW20,HI0659-,MIV
RdKW20,HI0659-,MM
RdKW20,HI0659-/HI0660-,MIV
RdKW20,HI0660-,MIV
RdKW20,MIV
RdKW20,WT
RdKW20,WT,mid-log,50µM beclomethasone
RdKW20,WT,mid-log,DMSO
RdKW20,beclomethasone
RdKW20,comN-,MIV
RdKW20,crp-,BHI
RdKW20,crp-,MIV
RdKW20,hfq-,MIV
RdKW20,murE749,BHI
RdKW20,prednisolone
RdKW20,rpoD753,BHI
RdKW20,sxy-,BHI
RdKW20,sxy-,MIV
RdKW20,sxy-1,BHI
bronchoalveolar lavage
nasopharynx
EDJ90279 (CGSHi22421_09467)
-1.11 -1.5 -1.59 -1.39 -1.79 -1.21 -1.19 -1.34 -1.29 -0.92 -0.78 -0.7 -0.74 3.44 -0.1 -0.17 -0.23 -1.49 -1.07 -1.29 0.2 -0.19 0.97 1.02 1.11 1.02 1.05 -0.77 0.04 -0.32 -0.8 -0.43 -0.23 -0.35 -0.35 -1.03 -0.07 -0.17 -0.51 -0.28 -0.62 0.35 -0.3 -0.79 -0.97 -0.53 -0.99 -0.6 -0.8 -0.03 -0.23
EDJ90297 (CGSHi22421_09557)
0.27 0.22 0.21 -0.97 -0.92 -0.99 -0.42 -0.36 -0.51 0.06 0.09 0.07 0.13 2.89 -0.73 -0.91 -0.75 -0.79 -0.88 -0.84 -0.48 0.57 0.24 0.21 0.22 0.09 0.13 -0.31 -0.67 -0.27 -0.13 0.29 -0.2 -0.04 0.1 -0.73 -0.48 -0.3 -1.52 -0.27 -0.11 0.27 -0.14 -0.33 -1.35 -0.33 -0.06 -0.01 -0.29 0.29 0.17
EDJ90482 (CGSHi22421_06277)
0.14 0.28 0.4 -0.34 -0.4 -0.24 0.42 0.2 0.03 -0.83 -0.76 -0.75 -0.79 0.69 0.87 0.92 0.53 -0.01 -0.09 -0.07 -0.29 0.39 0.79 0.61 0.42 0.69 0.9 -0.53 0.19 0.46 -0.74 -1.01 -0.8 -0.84 -0.72 -0.29 -0.2 0.22 -0.22 -0.94 -0.17 -0.58 -0.61 -0.45 -0.66 -0.64 -0.4 -0.74 -0.41 0.46 0.34
EDJ90564 (rpmF)
-10.26 -10.3 -11.26 0.18 0.95 0.88 0.58 0.66 0.47 -2.99 -3.26 -3.53 -3.33 4.01 1.09 1.36 0.94 0.33 0.72 0.75 - - 0.29 0.48 0.77 0.47 0.25 -1.3 -4.69 -4.8 -0.71 -1.25 -2.06 -1.56 -1.19 -2.53 -4.99 -4.89 -2.29 -1.94 -1.1 -1.79 -2.02 -1.41 -2.64 -1.49 -1.26 -1.08 -1.26 -1.92 -1.72
EDJ90570 (CGSHi22421_01157)
0.21 0.03 0.07 0.66 -0.1 0.01 0.38 0.33 0.07 -0.43 -0.4 -0.44 -0.36 1.68 1.3 0.3 0.85 -0.31 -0.1 -0.18 0.46 0.37 0.52 0.09 -0.14 0.35 0.46 -0.32 -0.01 0.11 -1.58 -1.54 -0.73 -1.02 -1.27 -0.29 -0.39 -0.28 -0.69 -0.51 -0.17 -0.65 -0.59 -0.36 -0.58 -0.51 -0.31 -1.2 -0.39 0.29 0.25
EDJ90571 (CGSHi22421_01162)
0.23 0.1 0.15 0.66 0.05 -0.02 0.33 0.36 0.05 -0.54 -0.55 -0.74 -0.44 2.76 1.26 0.54 1.08 -0.13 -0.08 -0.06 0.66 0.31 0.6 0.03 -0.22 0.27 0.41 -0.82 -0.4 -0.31 -0.98 -0.92 -1.33 -1.3 -1.24 -0.51 -1.25 -1.03 -0.82 -1.16 -0.71 -1.35 -1.27 -0.83 -0.76 -1.06 -0.75 -1.11 -0.9 -0.15 -0.19
EDJ90572 (CGSHi22421_01167)
0.55 0.39 0.45 0.6 -0.01 -0.1 0.42 0.44 0.11 -0.06 -0.03 -0.17 -0.07 1.68 1.24 0.3 0.95 0.03 0.01 0.02 0.9 0.34 0.6 0.04 -0.26 0.29 0.53 -0.85 -0.01 0.05 -0.99 -1.04 -1.29 -1.38 -1.21 -0.26 -0.98 -0.67 -0.72 -1.18 -0.64 -1.43 -1.4 -0.79 -0.54 -1.07 -0.76 -1.07 -0.94 0.26 0.22
EDJ90573 (CGSHi22421_01172)
0.42 0.32 0.4 0.3 -0.51 -0.16 0.38 0.28 -0.02 -0.01 -0.05 -0.15 -0.03 2.39 1.25 0.31 1.01 -0.15 -0.15 -0.35 1.15 0.44 0.53 -0.04 -0.18 0.17 0.47 -1.06 0.19 0.2 -1.49 -1.75 -1.44 -1.57 -1.47 -0.26 -0.62 -0.48 -0.64 -1.36 -0.89 -1.5 -1.38 -1.03 -0.71 -1.27 -0.98 -1.43 -1.13 0.21 0.13
EDJ90574 (CGSHi22421_01177)
-0.3 -0.22 -0.09 0.42 -0.1 -0.03 0.58 0.45 0.13 0.1 -0.02 -0.1 0.06 2.6 1.32 0.39 1.14 0.04 0.08 0.0 1.03 0.28 0.25 -0.32 -0.43 0.11 0.35 -1.25 0.37 0.29 -1.79 -1.62 -1.8 -1.84 -1.94 -0.27 -0.42 -0.35 -0.71 -1.58 -1.04 -1.84 -1.66 -1.3 -0.81 -1.52 -1.19 -1.75 -1.32 0.32 0.21
EDJ90575 (CGSHi22421_01182)
0.22 0.32 0.34 0.19 -0.19 -0.31 0.52 0.44 0.14 0.16 0.11 0.06 0.18 2.38 1.12 0.46 0.72 0.12 0.15 0.19 0.1 -0.52 0.1 -0.39 -0.31 0.06 0.17 -0.46 -0.08 -0.2 -1.16 -0.82 -0.99 -1.07 -1.38 -0.2 -0.87 -0.89 -0.63 -0.85 -0.4 -1.04 -0.91 -0.42 -0.56 -0.58 -0.45 -1.11 -0.51 0.09 0.02
EDJ90624 (aroB)
-0.24 -0.73 -0.83 -1.94 -1.74 -1.66 -1.37 -1.5 -1.4 -2.43 -2.32 -2.38 -2.4 3.66 0.83 0.74 0.96 -1.44 -1.25 -1.2 -0.5 0.49 -0.6 -0.56 -0.74 -0.58 -0.6 -0.14 -0.7 -0.29 0.21 -0.07 0.15 0.08 0.17 -0.97 -0.09 -0.17 -1.09 0.15 0.09 0.76 -0.05 -0.07 -1.15 -0.29 -0.05 0.32 -0.04 -1.32 -1.35
EDJ90733 (CGSHi22421_00175)
- - - - - - - - - - - - - 4.34 1.65 1.6 1.71 - - - - - 2.26 2.27 2.23 1.73 1.87 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90735 (CGSHi22421_00185)
- - - - - - - - - - - - - 3.88 1.95 2.09 1.85 - - - - - 2.01 2.26 2.32 2.51 2.35 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90739 (CGSHi22421_00205)
- - - - - - - - - - - - - 4.37 1.63 1.51 1.46 - - - - - 2.12 2.08 1.56 2.22 2.45 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90740 (CGSHi22421_00210)
- - - - - - - - - - - - - 4.04 1.21 1.37 0.99 - - - - - 2.52 2.32 2.44 2.72 2.32 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90742 (CGSHi22421_00220)
- - - - - - - - - - - - - 2.8 2.7 2.43 2.34 - - - - - 2.19 2.43 2.57 2.57 2.4 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90744 (CGSHi22421_00230)
- - - - - - - - - - - - - 4.75 2.78 2.53 2.62 - - - - - -0.1 0.4 0.31 0.14 -0.63 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90745 (CGSHi22421_00235)
- - - - - - - - - - - - - 3.74 2.46 2.35 2.46 - - - - - 2.2 1.99 1.84 2.22 2.24 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90746 (CGSHi22421_00240)
- - - - - - - - - - - - - 3.99 2.14 1.79 2.02 - - - - - 2.23 2.24 1.61 2.35 2.48 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90747 (CGSHi22421_00245)
- - - - - - - - - - - - - 4.09 1.89 1.96 1.91 - - - - - 2.1 2.05 1.81 2.55 2.26 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90748 (CGSHi22421_00250)
- - - - - - - - - - - - - 3.44 2.48 2.31 2.22 - - - - - 2.34 2.04 1.9 2.5 2.67 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90751 (CGSHi22421_00265)
- - - - - - - - - - - - - 3.73 1.75 1.68 1.63 - - - - - 2.74 1.48 2.32 2.55 2.96 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90752 (CGSHi22421_00270)
- - - - - - - - - - - - - 4.06 0.96 0.77 0.42 - - - - - 2.59 2.08 2.19 2.84 2.89 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90753 (CGSHi22421_00275)
- - - - - - - - - - - - - 3.39 1.9 1.86 1.99 - - - - - 2.6 2.45 2.49 2.64 2.53 - - - - - - - - - - - - - - - - - - - - -8.21 - - -
EDJ90755 (CGSHi22421_00285)
- - - - - - - - - - - - - 5.08 1.37 1.2 1.21 - - - - - 1.14 0.02 0.82 1.01 1.63 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90760 (CGSHi22421_00310)
- - - - - - - - - - - - - 4.65 2.03 1.63 1.78 - - - - - 1.58 1.45 1.4 1.79 1.82 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90762 (CGSHi22421_00320)
- - - - - - - - - - - - - 3.75 2.37 2.38 2.27 - - - - - 2.23 2.03 1.89 2.34 2.25 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90763 (CGSHi22421_00325)
- - - - - - - - - - - - - 3.68 2.18 2.01 1.84 - - - - - 2.52 2.29 2.05 2.45 2.53 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90764 (CGSHi22421_00330)
- - - - - - - - - - - - - 3.69 1.97 1.68 1.9 - - - - - 2.55 2.42 2.25 2.49 2.49 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90765 (CGSHi22421_00335)
- - - - - - - - - - - - - 4.28 1.25 1.28 0.96 - - - - - 2.22 2.01 2.28 2.53 2.47 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90767 (CGSHi22421_00345)
- - - - - - - - - - - - - 5.02 0.62 -0.0 0.54 - - - - - 1.59 1.71 1.47 1.3 1.57 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90768 (CGSHi22421_00350)
- - - - - - - - - - - - - 3.04 2.94 2.71 2.45 - - - - - 2.13 2.14 2.04 2.26 2.43 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90769 (CGSHi22421_00355)
- - - - - - - - - - - - - 2.73 2.64 2.3 2.06 - - - - - 2.49 2.52 2.37 2.55 2.73 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90773 (CGSHi22421_00375)
- - - - - - - - - - - - - 4.48 2.04 2.02 1.93 - - - - - 1.88 1.52 1.8 1.74 1.74 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90774 (CGSHi22421_00380)
- - - - - - - - - - - - - 3.39 2.16 2.21 1.98 - - - - - 2.31 2.51 2.63 2.35 2.46 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90780 (CGSHi22421_00410)
- - - - - - - - - - - - - 4.03 1.5 1.4 1.14 - - - - - 2.61 2.3 2.69 2.14 2.36 - - - - - - - - - - - - - - - - - - - - - - - -
EDJ90786 (CGSHi22421_00440)
- - - 0.6 0.23 0.26 1.02 1.05 1.5 - - - - 2.01 2.47 1.96 1.84 - -13.54 - - - 1.94 2.14 2.22 1.94 1.91 - - - - - - - - - - - - - - - - - - - - - - 0.49 0.34
EDJ90855 (CGSHi22421_05500)
-2.81 -3.42 -2.96 -0.67 -1.46 -2.08 -0.7 -0.39 -0.5 -2.06 -1.05 -0.41 -0.28 3.64 -0.31 -1.22 -1.04 0.53 -0.39 -0.85 - - 0.65 0.53 0.11 0.07 0.77 -0.68 0.12 0.71 -0.43 0.03 -0.7 -0.78 -0.52 -0.79 0.01 -0.47 0.46 -0.21 -0.84 0.6 -0.63 -0.68 0.11 -0.84 -0.06 -0.48 -0.78 0.33 0.21
EDJ90856 (CGSHi22421_05505)
0.2 -0.52 -0.42 -1.86 -2.06 -1.51 -1.3 -1.33 -1.48 -0.44 -0.52 -0.17 -0.4 3.09 -0.5 -1.39 -0.26 -1.56 -1.56 -1.98 0.24 0.4 0.58 0.67 0.66 0.53 0.45 -0.23 0.25 0.19 -0.87 -1.12 -0.01 -0.13 -0.33 -0.96 0.47 0.36 -0.29 0.1 -0.05 0.84 0.09 -0.32 -0.26 -0.25 -0.4 -0.42 -0.17 -0.6 -0.65
EDJ90872 (CGSHi22421_05585)
- - - -2.99 -2.63 -2.66 -1.24 -1.46 -1.38 -0.05 -0.19 -0.73 -0.76 3.83 -1.3 -1.29 -1.08 -0.41 -1.03 -0.86 0.65 1.96 -0.71 -0.86 -0.98 -1.14 -0.81 -0.66 -0.62 -0.42 -0.5 -1.41 -0.65 -0.93 0.22 -1.15 -1.39 -1.52 0.72 -0.78 1.01 1.51 0.14 -0.75 -0.04 -0.76 -0.79 0.52 -0.72 -0.64 -0.59
EDJ91238 (CGSHi22421_01929)
-0.51 -1.09 -1.03 -1.95 -1.89 -1.41 -1.35 -1.48 -1.63 -0.49 -0.56 -0.34 -0.35 3.97 -0.04 -0.74 0.37 -1.31 -0.67 -0.9 -0.14 -0.46 -0.64 -0.43 -0.32 -0.63 -0.79 -0.82 -1.03 -1.23 -0.28 -0.22 0.91 -0.03 -0.4 -0.42 -0.26 -0.51 0.62 -0.32 -0.86 0.48 0.15 -0.86 0.13 -0.61 -1.01 -0.3 -0.87 -1.66 -1.71
EDJ91547 (fruK)
-0.84 -0.76 -0.75 0.27 0.17 -0.01 0.53 0.52 0.54 -0.74 -0.79 -0.75 -0.6 2.6 1.12 1.16 1.25 0.01 -0.4 -0.35 0.52 -0.24 -0.84 -1.43 -1.62 -0.79 -0.68 -0.56 0.84 0.87 -0.93 -0.69 -0.66 -0.88 -1.17 -0.57 -0.46 -0.31 -0.56 -0.74 -0.07 -0.31 -0.71 -0.49 -0.53 -0.41 -0.53 -0.97 -0.56 0.05 0.04
EDJ91568 (CGSHi22421_07352)
-1.29 -1.68 -1.61 -0.71 -1.58 -0.93 -1.7 -1.83 -1.91 0.28 0.24 0.54 0.42 2.65 -0.39 -0.63 -0.32 -1.78 -0.75 -1.0 -0.33 -0.3 1.43 1.51 1.33 1.31 1.49 -0.52 -0.47 -0.17 -0.59 -0.46 -0.38 -0.53 -0.65 -0.76 -0.42 -0.21 -0.44 -0.48 -0.58 -0.03 -0.27 -0.57 -0.7 -0.51 -0.55 -0.5 -0.51 -0.28 -0.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.