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Heatmap: Cluster_20 (HCCA)

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(Showing raw values)

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Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL17047 (glgC)
 27.25 77.17 30.97 55.49 13.76 23.56 430.93 9.8 174.97 265.48 77.61 207.15 82.21 7.64 40.19 43.59 61.86 8.33 86.59 28.93 93.23 98.06 95.03 70.47 25.41 9.94 191.08 19.35 46.23
CCL17048 (glgD)
 14.8 23.34 24.4 41.82 11.73 15.75 439.14 2.98 109.04 246.42 74.95 203.06 85.48 6.95 17.82 28.95 49.76 4.43 71.01 21.5 77.84 34.63 78.81 49.0 18.11 5.0 112.32 18.17 47.94
CCL17049 (glgA)
 22.07 51.25 31.96 53.52 14.72 28.35 539.9 8.61 191.27 339.58 106.9 276.05 126.28 8.53 31.35 72.39 65.89 7.99 102.85 23.47 80.06 64.32 142.86 110.42 43.03 8.93 128.83 19.9 69.2
CCL17050 (glgP)
 40.59 95.92 64.68 120.52 35.48 27.91 600.51 17.53 211.07 359.86 107.04 289.67 129.75 17.67 59.19 67.65 75.1 16.75 129.86 39.85 130.45 100.42 201.43 119.05 44.49 14.35 127.99 34.8 67.66
CCL17051 (BN171_1130005)
 24.84 55.07 32.48 51.98 16.64 21.74 368.64 10.71 64.03 231.84 70.11 201.48 65.32 10.25 24.5 50.55 43.81 8.65 67.7 19.4 54.0 79.16 129.26 60.44 31.15 8.3 50.63 23.83 43.15
CCL17078 (leuC)
 0.77 0.71 0.81 0.94 1.23 2.96 31.71 0.81 0.22 19.75 1.94 13.21 2.02 0.17 0.62 3.53 3.65 0.51 2.14 0.71 0.2 4.34 2.26 1.05 0.93 0.63 13.4 3.46 1.04
CCL17079 (leuD)
 0.97 0.35 1.07 1.03 1.1 1.97 26.2 0.8 0.16 24.71 2.1 8.08 1.7 0.17 0.59 3.19 1.58 0.41 1.53 1.23 0.39 2.61 2.08 1.0 0.82 0.62 5.68 2.58 0.35
CCL17080 (leuB)
 2.94 1.19 2.82 3.78 3.04 3.04 22.41 2.16 0.81 21.67 1.94 12.86 3.57 1.56 1.35 5.55 1.93 1.46 2.9 3.86 2.32 4.05 3.99 1.36 1.2 2.22 6.9 4.41 1.18
CCL17655 (cwp)
 234.69 133.56 213.86 88.06 148.6 177.71 523.77 91.3 99.93 629.11 524.56 576.55 264.76 61.68 34.37 429.57 174.29 69.48 383.27 306.49 163.01 176.32 466.08 376.66 312.89 114.46 490.98 240.03 373.61
CCL17765 (BN171_1780001)
 3.3 0.41 1.2 4.0 4.32 2.79 55.79 0.36 10.09 37.56 5.05 139.77 8.17 0.42 1.05 10.36 9.8 1.35 15.12 5.6 2.58 0.0 30.28 23.21 14.82 1.59 96.18 7.02 7.31
CCL17785 (hisD)
 37.66 40.98 40.87 45.66 35.65 25.75 97.36 32.09 11.91 133.31 72.66 29.71 50.03 24.9 22.2 82.24 40.51 39.22 34.65 40.24 19.11 40.0 36.8 28.43 43.73 25.03 72.36 48.76 50.81
CCL17849 (BN171_1840009)
 29.33 38.33 23.91 34.69 16.06 25.08 118.02 7.84 21.08 125.55 64.16 16.77 45.77 8.25 9.73 87.16 26.57 5.51 39.89 21.01 51.14 21.87 29.85 48.88 61.85 8.75 28.8 23.19 33.99
CCL17850 (BN171_1840010)
 17.9 22.24 18.23 20.12 10.63 35.07 155.65 5.57 13.83 164.34 81.78 24.77 40.71 6.55 5.41 89.7 30.62 3.93 40.18 18.59 45.64 14.9 29.59 52.07 61.38 6.57 27.58 26.11 52.42
CCL18225 (BN171_2170012)
 30.7 46.82 39.89 48.32 31.18 99.2 202.75 13.21 48.1 258.72 229.26 217.78 69.04 15.85 21.05 66.92 34.78 15.75 84.91 60.33 104.77 10.26 96.78 141.75 87.06 33.15 71.11 59.6 142.25
CCL18226 (BN171_2170013)
 31.34 44.3 39.72 45.18 21.35 78.53 250.82 12.89 93.75 358.01 232.43 189.24 99.62 26.09 22.78 101.62 63.61 14.34 100.08 46.53 97.89 35.86 119.93 179.89 100.71 22.52 134.05 75.03 96.57
CCL18360 (BN171_2230010)
 7.45 12.58 9.25 23.25 9.3 15.22 102.41 6.04 21.73 86.57 57.74 76.06 47.69 5.77 14.26 78.57 28.25 7.6 27.43 18.48 44.76 36.36 29.11 51.04 62.47 7.92 144.15 39.04 40.03
CCL18361 (BN171_2240001)
 7.38 6.38 11.56 12.54 7.52 16.36 154.19 3.05 12.28 162.46 98.88 119.33 64.39 5.46 5.75 102.52 28.28 4.57 33.63 35.1 32.22 5.35 39.62 42.84 55.15 11.84 94.98 41.07 69.48
CCL18478 (thrC)
 19.15 4.92 21.5 12.61 25.13 31.77 96.33 9.58 4.18 159.07 131.3 70.48 129.62 17.85 8.33 160.0 28.09 22.37 23.08 12.74 5.54 8.86 35.11 40.73 41.83 5.92 170.6 42.27 119.17
CCL18479 (thrB)
 50.46 8.94 49.5 35.53 45.9 82.85 118.1 25.27 8.33 164.46 158.16 77.9 205.36 41.49 15.42 286.27 63.59 46.81 48.21 53.08 22.51 15.39 68.89 137.78 129.57 27.0 352.89 102.99 121.5
CCL18539 (BN171_2420006)
 756.09 342.14 776.42 376.52 724.67 664.62 1219.87 539.24 408.92 1199.17 1284.97 1012.96 791.75 463.08 444.32 1186.3 862.16 886.28 1299.89 954.76 354.34 801.41 1514.83 471.62 899.62 790.63 1005.46 1343.35 1096.83
CCL18540 (BN171_2420007)
 93.65 27.09 114.25 58.55 100.16 204.23 453.75 37.01 130.52 594.51 633.55 523.15 405.42 88.02 52.84 542.23 198.14 103.6 381.88 202.54 82.3 130.74 442.6 191.54 343.51 121.74 394.45 482.74 630.39
CCL18541 (bioB)
 212.2 86.03 204.88 124.68 197.24 289.97 522.62 113.12 148.12 764.13 752.54 608.05 442.68 157.18 136.65 636.83 256.64 250.35 467.21 305.49 118.75 195.8 482.52 220.24 390.22 193.73 485.29 456.6 669.28
CCL18542 (thiH)
 114.91 161.52 135.84 149.28 152.59 145.85 478.76 115.51 68.13 532.3 562.93 451.65 197.04 114.95 205.39 218.43 117.86 218.91 211.47 221.66 117.25 124.66 65.85 56.95 119.96 151.92 435.42 361.45 566.67
CCL18544 (gabT)
 33.5 358.52 26.6 157.77 20.42 43.66 3387.65 15.75 446.77 994.65 66.35 45.38 81.22 19.41 80.72 48.54 407.4 17.25 79.7 52.5 361.64 59.98 29.17 190.73 62.24 19.37 1073.68 31.05 30.92
CCL18551 (ldh)
 111.38 151.55 80.24 148.26 57.87 15.13 361.73 41.52 119.07 349.2 225.47 126.5 111.54 23.67 34.22 200.54 79.03 20.63 61.06 32.8 39.02 21.7 98.09 77.02 73.38 11.46 181.77 37.75 98.22
CCL18945 (leuS)
 164.6 48.43 98.33 38.77 125.2 188.56 383.91 106.27 6.97 415.98 315.22 243.54 267.2 130.0 34.04 422.82 175.34 179.74 108.09 144.37 36.07 233.84 120.8 93.8 211.34 111.87 330.16 134.95 208.92
CCL19167 (brnQ)
 18.86 19.48 12.91 30.81 13.53 6.82 420.02 6.88 9.84 127.76 46.88 49.13 37.36 8.45 13.46 40.78 41.59 12.03 21.43 9.38 23.42 34.32 25.54 25.78 46.69 7.04 105.77 31.5 33.44
CCL19203 (cwp)
 74.94 59.51 64.86 29.23 41.6 38.94 112.81 37.86 61.02 130.14 91.81 90.57 88.56 43.56 38.03 110.91 41.85 47.44 41.14 57.41 29.07 41.8 59.49 70.98 36.1 22.82 89.61 76.98 67.04
CCL19259 (cwp)
 378.82 168.79 330.1 152.87 209.66 246.34 195.02 208.95 27.54 249.54 246.95 261.7 316.92 237.61 148.41 648.59 156.69 294.63 338.86 501.41 169.59 396.07 491.0 336.27 457.22 243.63 381.66 275.65 204.4
CCL19386 (atpD)
 10.03 113.47 7.76 107.85 5.99 6.08 2032.03 3.94 3.26 1122.1 171.7 441.47 38.5 5.77 29.0 43.73 24.5 9.51 104.44 24.1 145.31 67.17 53.86 15.35 67.48 17.39 1215.35 36.53 48.78
CCL19387 (atpB)
 15.73 176.69 12.32 184.0 15.22 5.61 1905.32 7.78 2.72 1055.39 151.5 428.26 31.89 9.01 57.17 32.22 17.63 19.07 101.41 36.1 186.63 120.26 51.19 8.24 46.89 36.66 835.49 35.75 45.96
CCL19388 (atpA)
 11.83 149.63 11.16 156.04 14.29 9.34 1600.82 6.74 2.21 1044.6 144.88 362.94 23.15 7.47 48.39 26.49 13.13 17.23 83.31 28.01 131.26 88.65 38.89 5.59 32.78 29.79 539.77 25.94 40.73
CCL19389 (atpF)
 5.51 85.02 6.68 70.64 5.11 13.55 2158.03 2.71 4.03 1691.43 178.5 486.27 40.24 4.3 24.45 39.05 24.38 6.71 147.35 9.11 74.23 121.16 62.05 8.83 51.62 11.87 928.4 67.39 31.0
CCL19390 (atpC)
 2.68 16.4 3.55 57.82 3.72 8.63 1514.84 0.63 1.62 1108.09 157.64 385.72 21.96 3.04 10.63 23.06 15.31 2.83 86.1 10.6 76.44 11.4 36.11 5.78 34.11 8.01 544.81 25.23 45.38
CCL19391 (atpE)
 6.88 96.97 7.19 108.24 6.54 20.68 3045.1 3.68 2.51 1702.54 277.75 640.29 26.5 6.72 35.12 25.56 24.79 10.13 118.64 19.93 112.92 42.12 52.64 7.99 37.97 20.78 685.27 34.49 89.0
CCL19392 (atpK)
 14.44 185.51 11.32 172.88 12.72 23.93 2242.39 7.39 4.33 1488.04 204.73 511.9 36.92 7.34 66.6 36.7 28.12 18.34 114.13 33.39 158.79 117.64 45.98 10.75 49.12 29.75 1013.04 38.54 43.72
CCL19393 (atpI)
 15.43 172.98 18.95 184.14 18.58 19.5 1759.41 8.49 18.45 1130.43 203.54 409.78 36.86 15.48 73.65 36.81 28.66 21.32 134.17 38.72 166.06 66.07 62.82 14.08 39.63 34.49 523.31 34.53 61.24
CCL19394 (BN171_3090013)
 91.01 618.36 93.07 419.73 81.29 91.64 2243.42 87.8 152.49 1375.36 261.11 478.9 72.02 53.5 253.31 91.39 98.25 110.48 261.26 142.28 343.54 281.37 135.14 47.74 93.51 113.26 1133.16 79.71 83.43
CCL19627 (rnr)
 68.46 53.28 56.31 49.7 44.39 36.75 62.09 46.75 33.68 61.77 54.24 47.33 57.89 45.26 37.21 69.99 36.84 34.86 41.64 51.03 31.2 33.81 42.48 22.4 42.75 34.29 78.82 41.57 43.01
CCL19890 (BN171_3590011)
 4.81 1.0 6.79 3.84 6.05 18.7 67.14 1.32 9.55 36.93 35.54 34.86 69.32 5.21 2.43 87.36 16.41 3.8 25.52 14.84 9.96 7.37 18.97 33.99 42.14 3.91 49.63 43.85 33.75
CCL19926 (BN171_3600004)
 46.9 512.43 40.67 287.27 39.37 85.65 2010.12 23.11 179.15 2540.86 576.07 250.66 247.26 27.48 200.83 106.33 266.1 35.2 452.77 70.23 890.48 492.85 142.68 178.04 128.32 38.69 898.43 171.15 143.19
CCL20455 (fusA)
 47.25 296.12 96.52 267.64 21.74 12.33 1528.29 11.55 382.08 781.38 210.78 286.24 163.7 14.06 117.52 33.83 119.96 12.33 123.77 75.65 508.7 778.52 24.4 152.77 21.56 11.95 694.74 18.7 57.52
CCL20476 (BN171_540001)
 142.63 188.16 119.33 189.46 121.33 88.07 2577.29 105.1 77.17 1903.19 368.58 269.95 148.5 84.39 82.98 286.78 254.57 118.01 373.21 110.31 108.53 89.05 260.02 63.92 195.12 90.73 346.12 192.76 120.71
CCL20702 (BN171_950003)
 40.68 59.24 62.32 68.14 48.71 89.58 91.51 52.89 51.31 91.24 66.16 74.13 93.01 27.82 43.17 73.49 28.52 34.39 95.81 74.99 56.69 265.83 85.64 110.79 75.61 70.41 80.5 45.84 65.8
CCL20703 (BN171_950004)
 35.76 49.01 72.93 67.64 61.14 111.78 118.82 47.38 42.14 115.5 81.31 94.18 91.78 21.28 38.51 96.59 31.87 33.31 111.98 60.77 57.55 145.97 114.15 135.61 97.02 56.72 110.03 42.98 60.45

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)