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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | BHI | Basal Medium | CD196,BHI | CD196,Basal Medium | CD196,Log,BHI | ClnR mutant | LB-CD16 | Log,BHI | LuxS KO | ND-CD12 | ND-CD13 | ND-CD17 | R20291 | R20291,BHI | R20291,Basal Medium | R20291,Heme+ | R20291,Log | R20291,Log,BHI | Strain 630 | Strain 630,BHI | Strain 630,Basal Medium | Strain 630,Faecal water+ | Strain 630,HPUra+ | Strain 630,Lag | Strain 630,Log | Strain 630,Log,BHI | Strain 630,Sporulating | TW11 | UK1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CCL16978 (BN171_1030028) | -0.58 | 0.47 | -0.65 | -0.14 | 0.34 | 0.86 | 0.33 | 0.41 | 0.63 | 0.32 | 0.49 | 0.58 | -0.36 | -1.52 | -0.17 | -0.19 | -0.36 | -0.68 | 0.82 | -0.39 | -0.28 | -0.27 | 0.77 | -1.07 | -0.72 | 0.01 | -2.35 | -0.98 | 0.08 |
CCL16979 (BN171_1030029) | -0.89 | -0.38 | -0.93 | -0.75 | -0.45 | 0.54 | 0.53 | -0.19 | 0.24 | 0.71 | 0.45 | 0.37 | -0.2 | -1.66 | -0.61 | -0.33 | -0.29 | -1.02 | 0.92 | -0.78 | 0.26 | 1.01 | 0.93 | 0.05 | -0.24 | -0.26 | -1.09 | -0.28 | 0.07 |
CCL17126 (ptb) | -2.18 | 1.31 | -2.33 | 0.66 | -3.38 | -3.07 | 0.91 | -2.55 | -0.37 | 0.73 | 0.88 | 0.37 | 0.04 | -1.95 | 1.72 | -2.85 | -1.83 | -1.61 | 0.58 | -2.17 | 1.65 | 1.31 | -2.58 | -2.05 | -2.78 | -3.81 | -1.1 | -1.03 | 1.29 |
CCL17127 (buk) | -2.73 | 0.6 | -2.86 | 0.18 | -3.97 | -2.34 | 1.0 | -3.14 | -0.49 | 0.99 | 1.22 | 0.7 | 0.41 | -2.69 | 1.29 | -2.39 | -1.32 | -2.0 | 0.58 | -3.08 | 1.06 | 2.03 | -2.67 | -2.26 | -2.61 | -4.53 | -0.76 | -1.28 | 1.53 |
CCL17156 (BN171_1330017) | -1.21 | -0.37 | -1.23 | -0.29 | -1.38 | -0.89 | 1.33 | -1.21 | 1.24 | 0.48 | 0.48 | 0.39 | 1.09 | -0.99 | -0.25 | 0.76 | -0.46 | -1.17 | 0.24 | -0.97 | 0.04 | 0.21 | 0.54 | -0.52 | -1.07 | -2.0 | -0.32 | 0.46 | -0.04 |
CCL17157 (BN171_1330018) | -1.42 | -0.97 | -0.72 | -0.23 | -0.8 | -0.59 | 1.35 | -1.62 | 1.04 | 0.75 | 0.53 | 0.18 | 0.93 | -0.79 | -0.25 | 0.45 | -0.68 | -1.21 | 0.21 | -0.46 | 0.23 | -0.19 | 0.58 | -0.07 | -0.43 | -1.39 | -0.7 | 0.32 | 0.16 |
CCL17384 (BN171_1450045) | -2.85 | -1.98 | -0.7 | -0.59 | -1.29 | -0.89 | 0.88 | -2.55 | 1.58 | 1.22 | 0.87 | 0.54 | 1.11 | -0.93 | -1.52 | 0.36 | 0.34 | -2.56 | -0.16 | -0.29 | 0.76 | -2.61 | 0.21 | -0.06 | -0.36 | -2.08 | 0.62 | - | 0.82 |
CCL17420 (BN171_150007) | -2.27 | -0.11 | -1.35 | 1.15 | -0.78 | -1.55 | 1.08 | -2.47 | -0.75 | 0.77 | 0.6 | 0.77 | 0.85 | -1.78 | -0.65 | -0.3 | -0.37 | -1.25 | 0.29 | -1.88 | 0.45 | 1.99 | -0.21 | -1.72 | -0.52 | -2.36 | -1.15 | -0.44 | 0.76 |
CCL17421 (BN171_150008) | -2.8 | -0.43 | -1.41 | 0.79 | -1.01 | -1.58 | 1.27 | -2.96 | -0.45 | 0.75 | 0.56 | 0.55 | 0.34 | -1.87 | -0.97 | -0.74 | -0.67 | -1.52 | 0.43 | -1.76 | 0.32 | 2.48 | 0.2 | -1.55 | -0.94 | -1.95 | -1.08 | -0.78 | 0.89 |
CCL17549 (BN171_1550002) | -1.33 | -1.59 | -1.09 | -1.94 | -2.33 | -0.47 | 2.39 | -2.66 | 1.76 | 0.06 | -0.58 | 0.23 | 1.2 | -1.73 | -2.44 | 0.14 | 0.34 | -2.61 | 0.93 | -1.6 | -0.85 | -2.32 | 0.4 | -0.16 | 0.19 | -3.27 | -1.34 | 0.59 | 0.37 |
CCL17605 (BN171_1610001) | -2.12 | -1.79 | -2.4 | -1.27 | -2.41 | -1.34 | 0.62 | -2.92 | 2.23 | 0.95 | 0.72 | 0.49 | 0.59 | -0.75 | 0.43 | -0.56 | -0.67 | 0.15 | 0.48 | -1.65 | -1.05 | -0.46 | -0.05 | 0.47 | -0.08 | -2.51 | 0.25 | 0.09 | 0.51 |
CCL17647 (BN171_1640037) | -3.51 | -3.9 | -3.9 | -2.55 | -4.38 | -1.88 | 1.13 | -4.69 | 2.38 | 1.33 | 1.02 | 0.88 | 1.24 | -2.37 | -3.15 | 0.32 | -0.24 | -3.2 | 0.05 | -3.28 | -1.88 | -0.87 | 0.07 | 0.23 | -0.18 | -4.93 | -0.06 | 1.05 | 0.54 |
CCL17684 (sigA) | -1.35 | 0.11 | -1.33 | -1.31 | -1.48 | -0.78 | 1.16 | -0.57 | 0.94 | 1.43 | 1.03 | 0.73 | 0.47 | -1.83 | -0.71 | -0.15 | -0.1 | -1.37 | 0.54 | -1.1 | 0.88 | -0.61 | -0.04 | -0.24 | -0.16 | -1.63 | -0.2 | -0.69 | 0.19 |
CCL17740 (BN171_1750001) | -2.56 | -2.96 | -1.67 | -1.38 | -2.08 | -1.3 | 1.49 | -3.39 | 0.05 | 1.82 | 1.28 | 0.99 | 1.09 | -1.67 | -2.45 | -0.02 | -0.22 | -2.42 | 0.76 | -1.41 | -0.6 | -1.21 | 0.56 | 0.16 | -0.03 | -2.69 | -1.17 | 0.21 | 1.22 |
CCL17789 (BN171_1800012) | -1.34 | 0.49 | -1.38 | 0.6 | -1.67 | -1.06 | 0.71 | -1.57 | 1.66 | 1.46 | 1.19 | 0.95 | 1.06 | -1.57 | 0.06 | -0.16 | -1.11 | -2.06 | -0.1 | -1.4 | 0.58 | 0.23 | -2.27 | -1.47 | -1.37 | -1.69 | -2.53 | -1.28 | 0.6 |
CCL17790 (BN171_1800013) | -5.53 | -2.14 | -4.54 | -0.77 | -3.61 | -1.93 | 1.38 | -4.59 | 2.53 | 1.9 | 1.3 | 1.47 | 0.83 | -2.83 | -1.69 | -0.28 | -1.12 | -3.98 | 0.55 | -3.38 | 0.4 | -1.08 | -2.9 | -1.75 | -1.85 | -6.21 | -2.01 | - | 1.32 |
CCL17791 (BN171_1800014) | -4.75 | -0.77 | -3.94 | -0.16 | -4.43 | -3.23 | 1.39 | -3.61 | 2.75 | 2.07 | 1.36 | 1.21 | 0.35 | -3.95 | -0.86 | -0.68 | -1.66 | -3.35 | 0.68 | -5.08 | 0.34 | -1.39 | -3.49 | -2.34 | -2.55 | -6.52 | -1.51 | - | 0.81 |
CCL18014 (BN171_2020001) | -3.22 | -3.34 | -2.44 | -3.48 | -4.16 | -1.31 | 0.9 | -4.11 | 2.14 | 1.18 | 0.59 | 0.58 | 1.36 | -1.77 | -3.44 | 1.49 | 0.29 | -3.04 | 0.08 | -2.18 | -2.43 | -4.87 | 0.63 | 0.08 | -0.49 | -3.95 | -0.82 | 1.3 | 0.54 |
CCL18043 (BN171_2050003) | -2.27 | -3.52 | -2.43 | -2.64 | -2.77 | -0.64 | 0.4 | -4.07 | 2.17 | 0.67 | 0.31 | 1.2 | 1.14 | -1.73 | -2.81 | 0.78 | -0.08 | -2.47 | 0.76 | -1.94 | -1.37 | -0.16 | 0.18 | 0.85 | 0.69 | -3.32 | 0.39 | 0.09 | -0.3 |
CCL18050 (BN171_2070002) | -1.5 | -2.5 | -0.7 | -0.97 | -1.42 | -0.55 | 0.91 | -3.3 | 1.32 | 1.11 | 0.99 | 0.72 | 1.27 | -0.11 | -1.45 | 0.76 | -0.28 | -1.86 | 0.58 | -0.18 | -0.29 | -2.48 | 0.53 | -0.19 | 0.06 | -2.16 | -1.13 | -5.6 | 1.06 |
CCL18210 (BN171_2160006) | -1.67 | -1.1 | -1.6 | -0.88 | -1.79 | -1.57 | 1.14 | -2.24 | 1.48 | 1.06 | 0.9 | 0.75 | 0.95 | -1.18 | -0.72 | -0.09 | -0.27 | -1.46 | 0.15 | -2.03 | -0.73 | -1.44 | 0.65 | 0.74 | -0.62 | -3.21 | -0.6 | 1.19 | 0.59 |
CCL18211 (BN171_2160007) | -1.17 | -0.18 | -1.1 | -0.38 | -1.61 | -1.61 | 0.86 | -1.44 | 2.04 | 0.32 | 0.66 | 0.24 | 0.57 | -1.3 | 0.01 | -0.56 | -0.62 | -0.85 | 0.1 | -1.07 | -0.12 | 0.01 | 0.25 | 0.85 | -0.75 | -2.02 | -0.42 | 0.54 | 0.27 |
CCL18212 (BN171_2160008) | -1.35 | -1.07 | -0.8 | -0.54 | -1.04 | -1.34 | 0.62 | -1.95 | 1.95 | 0.3 | 0.57 | 0.6 | 0.74 | -1.11 | -0.68 | -0.56 | -0.4 | -1.19 | 0.33 | -0.19 | 0.23 | -2.17 | 0.43 | 0.87 | -0.59 | -1.97 | -0.54 | 1.01 | 0.18 |
CCL18213 (BN171_2160009) | -1.68 | -1.11 | -1.03 | -0.65 | -2.02 | -1.07 | 0.3 | -2.39 | 2.24 | 0.32 | 0.69 | -0.05 | 1.01 | -0.51 | -0.96 | 0.03 | -0.32 | -1.85 | 0.37 | -0.74 | -0.27 | -1.74 | 0.61 | 0.29 | -1.05 | -2.36 | -0.94 | 1.52 | 0.32 |
CCL18214 (BN171_2170001) | -1.02 | -0.76 | -0.89 | -0.62 | -1.53 | -0.44 | 0.83 | -1.5 | 1.31 | 0.71 | 0.64 | 0.43 | 1.13 | -0.5 | -0.73 | 0.24 | -0.33 | -1.35 | 0.08 | -0.17 | -0.01 | -0.44 | 0.11 | 0.58 | -0.13 | -0.96 | -0.53 | 0.18 | 0.17 |
CCL18433 (glnF) | -0.77 | 0.3 | -0.78 | -0.62 | -0.29 | -0.01 | 0.56 | -0.13 | 0.9 | 0.6 | 0.32 | 0.35 | 0.15 | -0.79 | 0.42 | -0.05 | -0.5 | -0.06 | 0.75 | -0.39 | -0.03 | 0.48 | 0.46 | -0.55 | -0.64 | -0.9 | -1.56 | -0.81 | 0.29 |
CCL18580 (BN171_2440021) | -2.7 | -4.1 | -0.36 | -0.74 | -1.6 | -0.74 | -0.25 | -6.67 | 2.61 | -0.52 | -0.57 | -0.51 | 1.26 | -1.94 | -2.63 | 1.01 | -1.16 | -2.79 | 0.54 | -0.04 | -0.91 | -2.4 | 0.36 | 1.36 | 0.42 | -2.33 | -0.02 | 0.87 | -0.61 |
CCL18667 (BN171_2480042) | -2.27 | -1.57 | -1.89 | -1.01 | -1.99 | -0.6 | 1.09 | -2.3 | 0.97 | 1.27 | 1.26 | 1.01 | 0.83 | -0.98 | -1.37 | 0.19 | 0.21 | -1.7 | 0.41 | -1.04 | -0.21 | -1.6 | 0.21 | 0.46 | -0.03 | -2.04 | -1.49 | 0.04 | 1.17 |
CCL18797 (BN171_2620020) | -2.01 | -1.76 | -1.75 | -0.69 | -1.79 | -0.78 | 0.88 | -3.11 | 0.79 | 0.55 | -0.08 | 0.08 | 0.45 | -2.66 | -1.44 | -1.07 | -0.87 | -2.12 | 1.35 | -0.2 | 0.69 | 2.07 | 0.85 | 1.03 | -0.43 | -0.45 | -0.32 | -1.43 | -0.59 |
CCL18861 (BN171_2690018) | -0.3 | 0.63 | -0.43 | 0.09 | -0.53 | -1.9 | -0.43 | -0.66 | -1.02 | -0.81 | -0.18 | -0.33 | -0.53 | -1.07 | 0.5 | -1.16 | 0.8 | -0.78 | 1.0 | -0.03 | 0.99 | 1.73 | 0.78 | 0.08 | -1.05 | -0.77 | -0.61 | -0.08 | -0.57 |
CCL19018 (hadA) | -1.54 | -0.21 | -1.44 | 0.13 | -1.56 | -1.09 | 0.17 | -1.12 | 2.25 | 0.52 | 0.69 | -0.09 | 0.72 | -3.68 | 0.44 | -0.94 | -0.91 | -0.84 | 1.09 | -1.85 | 0.41 | 0.63 | 0.7 | -1.71 | -1.27 | -1.6 | -0.8 | -1.85 | 0.78 |
CCL19019 (hadI) | -2.63 | -1.35 | -2.57 | -0.86 | -2.85 | -0.68 | 0.49 | -2.24 | 2.36 | 0.7 | 0.94 | 0.12 | 0.98 | -4.98 | -0.53 | -0.67 | -0.68 | -1.72 | 1.19 | -2.66 | -0.13 | 0.93 | 0.75 | -1.88 | -0.99 | -2.28 | -0.26 | -1.75 | 1.19 |
CCL19020 (hadB) | -2.73 | -1.25 | -2.67 | -0.81 | -2.76 | -1.65 | 0.54 | -2.29 | 2.18 | 1.01 | 1.11 | 0.3 | 1.16 | -5.0 | -0.56 | -0.73 | -0.49 | -1.74 | 1.12 | -3.16 | -0.23 | 0.88 | 0.7 | -2.32 | -1.01 | -2.61 | -0.33 | -1.61 | 1.31 |
CCL19021 (hadC) | -2.41 | -1.21 | -2.16 | -0.28 | -2.29 | -1.87 | 0.34 | -2.14 | 2.05 | 0.82 | 0.99 | 0.18 | 1.14 | -4.4 | -0.34 | -0.64 | -0.09 | -1.45 | 1.25 | -2.73 | 0.14 | 0.72 | 0.65 | -2.26 | -0.8 | -2.0 | -0.26 | -1.11 | 1.12 |
CCL19064 (BN171_2850003) | -0.66 | -0.42 | -0.54 | 0.02 | -0.3 | -0.83 | 0.58 | -0.83 | 1.4 | 0.5 | 0.4 | 0.31 | 0.5 | -0.51 | -0.33 | 0.47 | -0.48 | -0.43 | 0.16 | -0.22 | 0.29 | -0.2 | 0.86 | -0.19 | -0.93 | -0.7 | -1.33 | -0.08 | -0.2 |
CCL19408 (BN171_3110001) | -4.43 | -2.63 | -2.54 | -1.51 | -2.48 | -1.1 | 0.84 | -4.56 | -0.93 | 1.63 | 1.39 | 2.05 | -0.14 | -4.88 | -2.46 | -0.51 | -0.29 | -4.43 | 0.95 | -2.15 | -0.05 | -5.57 | 1.58 | -0.15 | -0.83 | -2.75 | 0.23 | -0.24 | 1.56 |
CCL19409 (BN171_3110002) | -3.78 | -3.07 | -2.49 | -1.45 | -2.43 | -1.32 | 0.94 | -4.47 | 0.18 | 1.67 | 1.19 | 1.74 | 0.26 | -4.05 | -2.52 | -0.3 | -0.78 | -4.02 | 1.12 | -2.06 | 0.02 | -0.64 | 1.76 | 0.04 | -0.84 | -3.19 | 0.31 | -0.69 | 0.92 |
CCL19410 (BN171_3110003) | -2.88 | -3.1 | -1.03 | -0.07 | -1.01 | -0.71 | 0.86 | -4.76 | 0.16 | 1.06 | 1.02 | 1.39 | 0.2 | -3.03 | -1.72 | -0.25 | -0.9 | -3.1 | 1.1 | -0.76 | 1.04 | -0.9 | 1.65 | -0.08 | -0.94 | -1.42 | 0.27 | -1.23 | 0.58 |
CCL19411 (BN171_3110004) | -2.1 | -0.44 | -1.33 | -0.21 | -1.32 | -1.55 | 1.0 | -2.1 | 0.31 | 1.28 | 1.04 | 1.55 | 0.11 | -3.41 | -0.95 | -0.47 | -1.06 | -2.45 | 0.99 | -1.48 | 0.42 | -0.45 | 1.63 | -0.13 | -1.17 | -2.26 | 0.18 | -1.9 | 0.67 |
CCL19412 (BN171_3110005) | -3.15 | -2.95 | -1.57 | -0.72 | -1.91 | -1.53 | 0.95 | -5.1 | 0.35 | 1.63 | 1.4 | 1.86 | 0.39 | -3.83 | -2.42 | -0.45 | -0.94 | -4.31 | 1.2 | -1.68 | 0.11 | -1.05 | 1.71 | -0.4 | -1.35 | -2.43 | -0.12 | -1.04 | 0.63 |
CCL19413 (BN171_3110006) | -2.18 | -0.39 | -1.44 | -0.2 | -1.54 | 0.07 | 1.02 | -2.76 | 0.72 | 1.39 | 1.12 | 1.52 | -0.01 | -3.55 | -1.07 | -0.43 | -1.12 | -3.16 | 0.82 | -1.11 | 0.77 | -0.05 | 0.9 | -0.38 | -1.11 | -1.9 | 0.15 | -1.65 | 0.42 |
CCL19414 (BN171_3110007) | -3.1 | -1.49 | -1.56 | -0.68 | -1.98 | -1.1 | 1.21 | -3.66 | 0.88 | 1.87 | 1.35 | 1.86 | 0.57 | -3.73 | -1.9 | 0.08 | -1.21 | -4.0 | 0.51 | -1.72 | 0.1 | 0.01 | 0.8 | -1.1 | -1.57 | -3.21 | -0.17 | -2.45 | 0.9 |
CCL19415 (BN171_3110008) | -2.37 | -0.91 | -1.34 | -0.53 | -2.22 | -0.41 | 0.82 | -3.07 | 1.55 | 1.52 | 1.03 | 1.37 | 0.31 | -3.1 | -1.53 | 0.16 | -1.14 | -3.62 | 0.38 | -0.67 | 1.02 | 0.54 | 0.81 | -1.03 | -1.65 | -1.26 | -0.67 | -1.99 | 0.35 |
CCL19416 (BN171_3110009) | -3.59 | -1.75 | -1.88 | -1.57 | -3.03 | -0.94 | 0.95 | -3.91 | 0.15 | 1.76 | 1.57 | 2.05 | 0.76 | -3.36 | -2.24 | 0.47 | -1.58 | -4.58 | 0.5 | -0.86 | 0.91 | 0.8 | 0.38 | -2.21 | -2.06 | -2.44 | -1.46 | -0.67 | 0.58 |
CCL19685 (etfA) | -2.17 | -0.22 | -2.2 | 0.18 | -2.04 | -1.5 | -0.05 | -1.47 | 2.03 | 0.44 | 0.57 | -0.19 | 0.83 | -4.27 | -0.33 | -0.35 | -0.05 | -1.27 | 1.09 | -2.84 | 0.01 | 0.79 | 0.14 | -0.99 | -0.47 | -1.73 | 1.11 | -0.8 | 0.78 |
CCL20137 (BN171_370011) | -2.74 | -0.23 | -2.6 | 0.35 | -1.0 | -2.93 | 1.38 | -0.79 | 0.69 | 1.74 | 1.73 | 1.63 | -0.01 | -2.2 | 0.82 | 0.16 | -2.17 | -0.52 | 0.52 | -1.64 | 0.54 | -3.27 | -1.66 | -1.45 | -1.61 | -2.48 | -2.34 | - | 0.74 |
CCL20445 (glsA) | -1.44 | 0.38 | -1.39 | -0.03 | -1.69 | -1.42 | 0.87 | -1.65 | -0.21 | 0.55 | 0.61 | 0.81 | -0.58 | -1.84 | 0.12 | -0.89 | -0.41 | -1.09 | 1.13 | -0.88 | 0.65 | 1.51 | 0.27 | -0.1 | -0.45 | -1.3 | -0.15 | -0.03 | 0.53 |
CCL20670 (BN171_880006) | -1.65 | -1.17 | -0.6 | 1.0 | -0.94 | -0.6 | 0.97 | -1.42 | -0.35 | 2.3 | 1.39 | 0.13 | 0.71 | -1.47 | -0.91 | 1.24 | -0.74 | -1.07 | 0.73 | -1.47 | -0.67 | -2.05 | 0.01 | -1.0 | -1.04 | -1.65 | -1.94 | - | 0.28 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.