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Heatmap: Cluster_5 (HCCA)

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(Showing raw values)

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Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL17594 (BN171_160010)
 1.41 1.78 1.7 3.62 1.74 0.5 22.37 0.9 2.79 18.33 4.96 18.09 3.38 0.79 1.32 2.98 2.41 1.0 10.67 0.88 3.78 0.75 3.87 20.86 1.91 0.51 7.33 0.0 3.47
CCL17595 (BN171_160011)
 1.79 1.83 2.21 3.96 2.7 0.87 29.33 2.36 0.78 23.43 5.91 18.0 3.0 0.94 1.72 3.41 7.03 1.75 22.43 3.74 5.42 0.37 5.61 38.97 2.44 1.49 23.65 0.0 2.31
CCL17777 (BN171_180001)
 0.53 2.05 1.38 2.17 1.47 1.91 4.48 0.7 1.54 15.57 25.29 10.79 7.53 1.48 2.64 3.93 2.33 1.46 12.49 0.4 3.42 7.82 4.36 1.88 4.27 1.23 0.99 0.0 24.13
CCL18281 (BN171_220033)
 61.07 87.98 58.93 60.48 28.13 25.86 53.65 27.17 55.7 52.41 44.48 52.09 75.11 36.79 58.62 90.94 28.46 34.51 82.03 52.59 50.47 31.35 69.94 53.3 40.77 16.56 59.85 42.05 30.46
CCL18282 (splB)
 62.67 112.15 52.84 64.85 34.86 30.8 72.82 35.61 49.97 74.32 57.24 68.57 78.02 29.36 67.5 94.86 28.74 34.45 75.21 54.0 47.47 30.47 66.42 54.19 43.14 17.85 74.97 51.44 37.81
CCL18473 (BN171_2380004)
 11.11 29.16 19.59 52.38 30.66 8.07 321.17 13.07 35.27 111.75 91.32 146.02 47.84 9.11 22.0 19.45 31.45 14.74 106.76 8.42 6.58 49.79 107.11 39.2 12.98 5.82 158.02 16.92 90.6
CCL18501 (BN171_240006)
 120.64 140.86 123.41 109.7 90.49 51.75 271.55 105.49 43.61 209.64 180.86 237.64 151.59 87.79 112.31 248.86 78.36 119.96 157.48 108.78 85.27 287.31 46.35 41.12 108.52 47.96 57.22 55.33 155.88
CCL18877 (ppiB)
 543.53 354.86 518.61 378.4 557.62 219.77 610.98 379.16 200.2 564.75 535.53 548.11 475.34 511.92 371.38 657.12 333.38 544.05 473.98 765.69 391.74 679.19 292.82 316.3 726.61 295.6 293.56 292.2 531.25
CCL19017 (ldhA)
 664.03 1229.77 478.39 1520.8 524.29 750.58 1399.38 529.81 4773.1 1951.26 2732.22 1590.68 3358.69 380.82 3011.63 2088.53 1661.0 1380.29 5265.08 605.8 2347.26 2560.64 5036.82 2805.74 2359.19 702.99 5482.54 3114.14 3362.16
CCL19472 (BN171_3170006)
 42.65 5.42 59.11 22.57 36.41 70.93 382.43 3.06 134.75 229.05 135.52 167.29 294.77 54.99 12.44 91.19 100.65 20.21 274.06 46.87 26.36 13.28 161.83 81.17 92.97 14.33 88.56 284.36 120.97
CCL19504 (xynC)
 6.97 6.82 9.13 11.67 10.49 17.4 31.43 8.44 3.69 35.39 44.97 50.68 17.44 10.35 18.14 27.33 14.27 17.72 27.37 7.28 11.16 10.68 11.8 16.02 18.38 8.27 20.36 17.28 29.63
CCL19505 (BN171_3180029)
 3.69 3.58 5.47 7.58 4.25 5.57 18.79 3.39 5.13 23.15 21.82 22.81 11.01 7.68 10.69 8.84 5.68 6.98 13.91 4.09 5.17 4.47 4.24 7.96 6.44 1.83 8.2 9.24 17.33
CCL19568 (BN171_3270006)
 45.7 20.59 42.71 28.74 28.46 19.98 44.22 14.78 43.76 37.58 28.66 23.26 42.75 31.13 22.06 30.1 24.53 25.25 56.34 32.43 14.15 15.73 43.25 28.27 40.92 14.63 46.95 44.9 16.89
CCL19569 (BN171_3270007)
 14.08 3.72 11.58 6.57 5.3 8.92 26.67 2.61 17.68 13.6 10.71 14.62 21.31 8.79 5.32 12.54 7.07 7.98 24.53 11.52 4.42 11.12 25.64 10.22 21.51 3.73 21.26 14.35 5.26
CCL19577 (BN171_3270015)
 3.85 6.83 3.24 7.09 4.52 11.33 22.49 5.09 3.11 14.32 12.95 13.88 11.56 4.29 6.82 18.14 5.06 6.4 14.85 4.65 11.45 0.83 14.08 4.89 7.27 3.8 5.31 2.8 11.01
CCL19623 (BN171_3310003)
 0.61 0.19 1.19 1.74 0.92 1.23 22.31 0.25 1.44 20.66 14.13 16.2 8.21 0.72 0.44 8.05 3.65 0.36 13.12 0.83 1.54 1.41 10.17 2.07 3.51 0.38 3.02 9.35 8.23
CCL19624 (BN171_3310004)
 7.85 5.75 6.65 10.88 9.19 1.53 28.71 4.54 2.56 28.15 19.99 19.65 9.58 5.19 4.02 6.89 4.43 7.68 14.17 5.23 6.85 1.66 10.83 1.71 3.18 5.5 2.31 2.0 13.15
CCL19625 (BN171_3310005)
 2.56 3.53 1.94 4.41 3.15 1.41 21.95 1.9 2.25 20.69 12.27 13.71 7.64 1.27 2.64 6.26 2.53 3.09 12.18 2.72 4.33 1.7 8.84 1.75 3.1 2.08 1.28 0.0 8.51
CCL19626 (BN171_3310006)
 17.34 13.49 17.24 16.68 12.95 13.79 38.39 8.27 8.3 33.31 31.58 38.07 13.75 11.44 10.73 16.14 11.18 13.06 32.13 25.03 21.45 0.65 27.55 8.42 15.54 13.42 7.13 23.32 24.83
CCL19636 (BN171_3340003)
 33.01 29.55 30.67 26.08 32.29 18.73 148.47 31.36 22.82 121.38 84.73 86.76 33.93 23.62 30.0 37.7 39.81 38.29 60.51 26.34 18.09 42.56 53.57 13.96 16.14 19.68 6.59 36.41 65.21
CCL19637 (BN171_3340004)
 29.97 30.35 29.4 18.85 41.22 14.27 151.17 35.87 32.44 122.88 85.83 102.17 43.83 23.55 29.37 52.98 33.92 40.48 51.5 24.4 9.81 20.87 44.98 11.06 16.4 17.38 6.27 42.22 58.15
CCL19638 (BN171_3340005)
 14.11 13.1 14.46 11.11 14.76 9.54 152.78 14.71 25.93 144.04 101.76 106.73 40.88 12.06 13.81 42.09 24.89 17.38 43.17 10.34 6.15 23.9 32.7 7.01 15.96 8.47 4.44 34.01 90.93
CCL19714 (BN171_3420002)
 32.53 25.33 57.31 40.5 48.02 93.5 623.89 29.43 50.61 204.68 164.22 206.3 211.72 38.85 30.05 264.25 52.67 51.74 129.28 75.18 86.85 67.68 99.24 37.83 128.19 48.54 194.75 139.63 180.92
CCL19725 (prdR)
 30.71 36.93 35.39 37.9 40.1 30.88 73.72 21.45 49.62 53.92 44.83 50.82 68.93 39.82 52.1 83.84 18.45 37.97 54.75 66.92 83.59 58.01 43.21 38.81 31.77 35.3 44.94 48.26 37.59
CCL19775 (BN171_3470013)
 0.26 0.26 0.26 0.17 0.06 0.87 38.56 0.35 0.5 21.13 13.86 16.99 10.03 0.12 0.18 3.53 1.24 0.32 7.04 0.06 0.06 0.0 9.41 0.41 0.17 0.05 0.38 2.03 16.42
CCL19776 (BN171_3470014)
 7.28 4.84 7.44 6.91 6.54 0.98 37.33 9.68 10.39 18.81 9.29 7.71 12.28 5.42 6.11 6.3 4.69 9.11 10.15 8.21 9.55 30.84 4.42 7.87 10.97 4.36 7.9 10.54 7.64
CCL19777 (BN171_3470015)
 1.28 0.5 2.76 1.92 2.45 1.73 27.48 0.45 6.19 13.17 5.77 7.0 10.96 3.67 1.19 7.19 2.95 1.73 10.9 4.2 4.13 3.98 5.39 4.11 5.5 1.66 3.55 9.14 6.12
CCL19778 (BN171_3470016)
 11.68 7.34 10.52 8.61 8.39 11.52 47.16 5.68 35.22 20.76 14.72 13.86 21.6 11.22 8.41 19.59 7.59 7.53 33.11 15.04 11.75 27.21 20.35 15.56 16.53 9.23 17.97 15.48 13.98
CCL19779 (BN171_3470017)
 16.36 7.38 23.9 15.17 17.74 15.3 105.37 6.38 42.19 40.13 23.97 23.2 34.16 29.65 9.92 25.2 12.99 9.29 43.09 44.59 20.23 7.73 25.22 17.77 20.85 20.47 47.13 17.64 24.02
CCL19808 (BN171_350002)
 99.2 286.65 82.68 199.18 96.4 63.73 346.44 125.05 33.6 170.5 161.54 147.18 127.04 78.95 219.01 84.52 57.37 97.58 206.93 111.46 311.77 26.22 128.4 165.06 61.34 79.3 139.37 0.0 185.72
CCL19853 (BN171_3570002)
 143.53 494.63 103.57 480.65 147.8 123.41 1472.14 115.13 108.85 964.88 426.84 270.62 257.47 136.12 359.59 260.66 192.06 252.24 686.97 180.16 415.65 393.41 313.82 158.54 333.0 126.23 139.44 187.31 247.45
CCL19854 (BN171_3570003)
 35.52 117.91 19.84 127.65 25.26 57.91 1438.65 21.43 34.12 950.96 428.51 243.16 263.79 27.69 95.25 287.19 134.71 68.37 537.9 33.3 129.63 543.75 237.45 131.53 295.2 22.61 179.19 127.79 267.61
CCL19855 (BN171_3570004)
 66.84 193.64 40.08 225.26 47.76 98.66 1929.45 39.67 23.78 1249.61 538.53 332.9 319.76 56.65 163.33 345.82 199.0 115.42 694.25 62.07 223.79 652.86 325.62 99.36 336.41 44.48 260.16 197.26 343.17
CCL19924 (BN171_3600002)
 15.82 12.54 20.67 17.14 10.54 11.66 101.62 3.53 27.74 45.67 35.11 27.4 43.94 22.12 19.96 20.35 30.2 11.81 89.1 31.9 51.99 33.2 44.24 43.66 20.71 9.48 50.32 22.78 23.48
CCL19929 (EndoA)
 141.66 354.27 123.34 323.01 85.0 113.61 867.1 82.32 2032.77 462.69 474.87 366.77 863.81 66.29 143.53 627.88 309.05 101.6 835.17 140.19 401.55 444.83 705.42 1467.03 547.07 67.35 1857.34 372.85 312.76
CCL19930 (BN171_3600008)
 701.37 926.15 560.16 945.35 562.5 295.25 1204.27 468.2 1508.99 728.05 742.64 568.29 844.81 624.21 672.24 497.38 334.57 611.72 685.72 937.73 1366.74 1298.09 522.49 1379.22 520.18 456.84 1582.83 343.03 506.63
CCL19931 (alr)
 128.89 569.58 136.16 537.63 143.07 156.29 979.68 83.63 1435.47 661.42 510.31 385.8 618.46 66.01 170.01 298.85 121.74 74.53 559.48 183.16 474.03 666.17 412.64 708.14 200.27 109.42 1035.3 108.64 258.17
CCL19932 (BN171_3600010)
 98.28 281.4 92.92 359.62 118.83 68.1 650.23 58.07 828.99 397.26 276.06 215.85 570.59 54.75 100.98 251.17 97.69 49.55 500.92 155.18 311.18 330.52 401.33 382.83 161.85 73.14 868.38 99.19 134.63
CCL19933 (BN171_3600011)
 44.94 50.92 67.24 187.65 67.25 38.57 469.27 6.3 669.66 330.15 237.66 189.26 229.92 25.23 37.69 158.56 68.46 20.66 386.04 103.81 201.59 72.24 336.68 265.66 122.39 42.82 320.04 79.96 141.05
CCL19934 (acpS)
 21.3 34.9 31.49 76.89 28.06 61.18 216.78 8.19 300.18 282.97 280.41 184.44 106.47 15.83 14.05 88.82 57.28 8.05 250.8 54.32 106.44 56.13 229.51 133.96 104.44 20.12 185.31 63.9 155.97
CCL19990 (BN171_3610033)
 237.97 283.63 198.85 162.32 270.85 242.01 1475.03 270.7 215.51 831.35 731.07 785.53 422.76 185.71 248.48 399.49 234.75 358.35 558.86 279.52 320.31 404.2 324.64 372.88 140.29 150.81 531.68 186.33 674.09
CCL20083 (BN171_3690027)
 98.37 45.17 66.3 81.71 69.92 23.25 1263.26 25.53 157.22 353.93 255.06 141.14 165.98 64.0 92.61 125.13 104.63 40.1 162.4 34.38 93.05 19.13 57.03 30.59 45.55 24.27 15.86 52.38 209.46
CCL20084 (BN171_3690028)
 109.1 63.64 55.19 89.96 83.59 12.69 746.29 36.89 94.62 232.42 149.19 70.3 151.6 61.84 136.51 144.72 77.36 61.41 122.01 28.66 84.52 20.66 40.33 24.09 52.48 20.35 8.63 47.63 110.79
CCL20156 (BN171_3720001)
 172.7 343.45 152.35 238.76 123.29 91.79 222.54 132.62 85.96 178.39 142.48 168.34 178.8 118.52 210.83 140.74 93.97 121.68 249.95 155.33 176.85 250.43 186.05 154.42 110.0 88.39 167.06 66.67 120.39
CCL20429 (BN171_450005)
 0.78 0.68 3.71 4.55 2.68 6.85 21.38 0.47 2.48 10.51 3.03 11.55 16.16 1.08 1.0 10.88 3.8 1.52 11.8 2.63 3.86 1.72 12.43 6.38 10.67 1.93 11.32 4.02 10.48
CCL20430 (BN171_450006)
 89.59 74.48 77.58 56.67 74.05 103.44 226.44 76.18 62.28 240.06 213.7 233.05 138.16 68.05 69.14 138.71 82.77 95.83 220.38 105.53 74.02 419.58 120.63 169.1 88.34 47.2 114.49 60.92 179.95
CCL20440 (BN171_460004)
 16.39 14.35 19.43 12.97 15.0 17.02 72.05 13.42 5.4 57.11 28.48 47.73 25.33 12.15 11.37 27.04 8.67 16.28 27.6 21.27 11.73 43.79 28.88 9.49 9.32 9.92 5.11 11.84 25.9
CCL20441 (sip)
 75.36 84.76 81.56 60.23 81.31 65.16 276.46 83.49 13.64 206.71 79.79 142.24 61.6 49.87 64.79 55.73 28.19 80.84 85.7 102.07 56.97 396.89 81.58 47.62 43.27 72.95 27.06 39.51 71.86
CCL20442 (sip)
 43.82 45.67 65.81 43.74 59.26 35.68 290.21 46.45 5.33 173.86 84.55 140.49 54.37 41.2 38.43 53.04 23.97 41.39 68.61 74.06 42.11 237.85 69.42 35.63 32.64 52.28 25.72 27.79 67.0
CCL20443 (BN171_460007)
 19.04 19.01 40.7 29.47 28.29 36.41 227.0 16.21 3.29 135.14 65.48 99.78 72.55 25.28 19.81 48.87 19.1 18.33 52.55 41.43 39.36 84.51 54.72 26.45 31.38 24.01 47.42 32.69 52.43
CCL20471 (BN171_510003)
 50.92 36.78 67.99 46.54 49.59 87.53 224.47 30.47 59.41 80.61 57.17 76.08 108.38 57.87 35.2 123.13 29.94 37.24 69.38 106.82 72.09 82.48 70.73 48.84 62.38 48.58 62.79 45.61 47.18

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)