Heatmap: Cluster_63 (HCCA)

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Gene	strain_5001420,control,fromUrine	strain_5001420,fromUrine	ch1034,13h_old_biofilm,biofilm_dispersed	ch1034,13h_old_biofilm,sessile	ch1034,7h_old_biofilm,sessile	ch1034,Log,planktonic	ch1034,Stationary,planktonic	control,fromNasalSwab,fromSwine	dmc1097	dmc1097,control,fromBlood	dmc1097,fromBlood	ekp16,fromSputum	eugenol,fromNasalSwab,fromSwine	fromBlood	fromHospitalPatients	fromRectalSwab	fromUrine	je01	k26,mero_susceptible,fromHospitalPatients	k56,mero_resistant,fromHospitalPatients	kctc2242	kp4,FeLimited,fromRespiratoryTract	kpr1,+CTX	kpr1,+gent	kpr1,+mero	kpr1,+TMP/SMX	kpr1,control	kpr2,+CTX	kpr2,+gent	kpr2,+mero	kpr2,+TMP/SMX	kpr2,control	kps1,+CTX	kps1,+gent	kps1,+mero	kps1,+TMP/SMX	kps1,control	kps2,+CTX	kps2,+gent	kps2,+mero	kps2,+TMP/SMX	kps2,control	mrsn 1319	ms6671	njst258-1,FeLimited,fromUrine	njst258-1,fromUrine	rb011,+mero,mero_resistant	rb011,control,mero_resistant	rb012,+gent,gent_resistant	rb012,control,gent_resistant	rb013,+cip,cip_resistant	rb013,control,cip_resistant	rb039,+cip,cip_resistant	rb039,+mero,mero_susceptible	rb039,control,cip_resistant	rb039,control,mero_susceptible	rb040,+cip,cip_susceptible	rb040,+gent,gent_susceptible	rb040,control,cip_susceptible	rb040,control,gent_susceptible	rb041,+cip,cip_susceptible	rb041,control,cip_susceptible	rb121,+gent,gent_susceptible	rb121,+mero,mero_susceptible	rb121,control,gent_susceptible	rb121,control,mero_susceptible	rb122,+gent,gent_resistant	rb122,control,gent_resistant	rb257,+mero,mero_resistant	rb257,control,mero_resistant	uhkpc05,FeLimited,fromBlood	uhkpc05,fromBlood	uhkpc07	uhkpc07,control,fromUrine	uhkpc07,fromUrine	uhkpc18	uhkpc18,control,fromUrine	uhkpc18,fromUrine	uhkpc33	uhkpc33,control,fromUrine	uhkpc33,fromUrine	uhkpc48	uhkpc48,FeLimited,fromUrine	uhkpc67	uhkpc67,control,fromBlood	uhkpc67,fromBlood	vakpc297	vakpc297,FeLimited,fromUrine
AGT24680 (N559_3017)	5.23	6.23	65.88	127.75	169.44	51.05	38.07	6.36	5.0	9.37	9.27	11.82	8.26	3.52	13.35	1.93	4.7	3.88	5.91	5.5	41.43	67.44	13.23	11.87	9.47	4.68	11.06	10.22	8.49	8.94	9.0	10.05	7.91	7.57	8.02	4.59	36.72	10.32	6.54	10.32	6.0	17.57	7.17	15.11	195.51	3.63	9.89	9.46	8.49	8.9	7.41	6.55	7.78	7.23	7.61	4.58	19.63	7.94	19.85	16.53	10.22	6.45	7.57	9.08	7.43	9.12	11.87	10.82	9.93	10.08	136.2	7.58	8.71	8.79	11.13	6.86	5.75	8.79	6.58	6.8	8.28	8.55	178.74	20.2	6.71	9.09	10.2	223.01
AGT24681 (N559_3018)	19.78	20.97	130.65	168.08	245.01	143.24	109.08	20.56	6.43	30.3	26.17	29.24	41.73	11.77	45.42	15.63	11.82	4.56	29.17	28.4	109.43	98.76	35.64	36.44	38.76	19.3	32.8	35.14	24.13	29.95	32.12	29.19	16.97	9.29	20.4	20.19	69.86	28.4	5.24	21.55	20.55	34.88	45.92	28.43	148.55	10.07	35.68	36.7	24.13	26.65	16.79	17.52	18.51	26.2	18.71	15.31	29.46	5.9	36.33	38.14	32.17	25.06	9.29	27.94	25.23	30.08	36.44	33.68	31.5	28.01	137.69	12.66	7.9	28.76	24.06	10.1	26.53	27.99	13.91	23.44	28.11	18.85	205.96	33.51	25.61	26.14	18.37	181.67
AGT24682 (N559_3019)	32.57	34.57	148.65	183.2	314.51	88.19	150.03	35.83	45.25	53.85	51.67	51.39	66.19	27.24	48.69	20.12	38.08	5.99	48.97	57.31	109.64	305.42	55.99	46.85	62.17	26.39	50.01	57.28	32.86	50.4	44.97	43.77	37.05	17.65	35.83	39.51	176.23	51.08	8.52	34.45	25.06	45.93	38.77	45.57	392.3	23.86	59.75	67.07	32.86	33.53	34.71	33.36	37.67	56.25	35.14	27.86	47.51	9.24	68.5	53.28	57.99	39.51	17.65	52.08	35.69	49.06	46.85	41.89	65.87	48.25	301.66	64.98	73.26	44.06	45.58	90.2	40.43	46.17	118.81	40.52	46.99	98.88	510.47	157.58	38.13	41.94	55.05	440.97
AGT24683 (N559_3020)	11.29	11.2	108.47	159.0	230.87	58.29	139.19	47.1	22.02	14.17	13.01	40.56	74.18	14.73	41.02	10.79	23.69	2.44	35.85	47.15	76.48	96.37	53.22	46.58	53.27	24.93	41.5	49.92	30.31	44.6	39.13	36.2	28.07	20.77	39.32	23.83	163.67	46.74	3.48	30.72	11.18	39.98	42.46	49.17	88.37	20.14	49.1	52.64	30.31	33.0	25.33	22.27	27.64	39.13	27.4	17.15	24.24	3.8	44.77	51.85	33.91	30.56	20.77	39.97	28.41	46.1	46.58	35.91	52.68	39.09	81.24	30.87	28.16	13.83	12.0	21.15	14.62	14.28	61.46	12.4	15.32	37.66	161.64	58.72	12.37	13.38	48.39	99.48
AGT26150 (N559_4547)	2.4	2.2	29.0	30.16	24.27	2.74	10.71	8.51	3.93	4.45	4.26	11.38	26.56	6.8	8.12	1.93	12.29	0.83	6.03	5.78	67.41	16.2	14.87	13.13	7.16	0.0	8.35	6.91	5.68	6.43	9.31	7.23	17.93	20.83	0.03	7.88	38.38	9.48	19.54	17.23	5.49	10.02	7.8	7.72	17.73	12.58	9.32	6.88	5.68	5.23	5.95	4.58	0.0	3.63	0.0	0.0	2.96	19.02	5.65	6.74	3.4	6.41	20.83	17.75	15.14	12.73	13.13	12.65	5.15	4.09	11.17	4.33	5.75	2.38	2.74	5.99	2.85	3.98	5.16	3.0	3.36	6.95	28.36	6.04	4.0	3.73	6.73	13.02

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)