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(Showing raw values)
Gene | 10403S,Log | 10403S,WT | 10403S,LMRG 00730 deleted | 10403S,delta sigB,Log | 10403S,WT,Log | 10403S,virR deleted,Log | 10403S,WT,Bile | 10403S,WT,ctrl | 10403S,delta sigB,Bile | 10403S,delta sigB,ctrl | 10403S | ATCC 19115,Lactic acid(1h) | ATCC 19115,ctrl | WT | EGD | ATCC 19115,linalool | EDGe,37C(20min) | EDGe,20C(20min) | EDGe,20C(3h) | EDGe,Light | EDGe,Dark | EGD,MQ Water(0h) | EGD,MW Water(10min) | EGD,0.1875% L.plantarum(10min) | EGD,MQ Water(1h) | EGD,0.1875% L.plantarum(1h) | EGD,0.1875% L.plantarum+1mg/ml Pro-K(1h) | EGD,MQ Water(at 0h) | EGD,MQ Water(at 3h) | EGD,Ampicillin 0.03g/ml(at 3h) | EGD,Tetracycline 0.035g/ml(at 3h) | EGD,Gentamicin 0.3g/ml(at 3h) | EGD,Co-trimoxazole 0.2g/ml(at 3h) | EGDe | EGD,WT | 37C,Late-Log | EGD,delta Lmo1408 | EGD,delta Lmo0422 | EGD,delta Lmo0599 | EGDe,Lincomycin 0.25g/ml | EGDe,Chloramphenicol 0.4g/ml | EGDe,Erythromycin 0.03125g/ml | EGDe,Kanamycin 0.5g/ml | EGDe,Ofloxacin 2g/ml | EGDe,Ampicillin 1g/ml | EGDe,Bacitracin 8g/ml | EGDe,ctrl | EGDe,Lincomycin 0.5g/ml | EGDe,WT | EGDe,delta lftR | EGDe,37C,Late-Log | EGDe,WT,Light | EGDe,WT,Dark | EGDe,Light | EGDe,Dark | FFH,30C | FFH,10C | H1,37C,Late-Log | H2,37C,Late-Log | H3,37C,Late-Log | H5,37C,Late-Log | H6,37C,Late-Log | H7,37C,Late-Log | H8,37C,Late-Log | H10,37C,Late-Log | H11,37C,Late-Log | H17,37C,Late-Log | H19,37C,Late-Log | H27,37C,Late-Log | H28,37C,Late-Log | H31,37C,Late-Log | H32,37C,Late-Log | 568 | H7858,Log | H7858,WT,Bile | H7858,WT,ctrl | H7858,delta sigB,Bile | H7858,delta sigB,ctrl | LL195,ctrl | LL195,acid | Lm1,4C,Late-Stationary | Lm1,4C,Late-Log | Lm1,4C,Log | Lm1,WT,4C,Log | Lm1,4C,Lag | Lm1,20C,Late-Stationary | Lm1,20C,Late-Log | Lm1,20C,Log | Lm1,WT,20C,Log | Lm1,20C,Lag | LO28,37C,Late-Log | N12-0605,ctrl | N12-0605,acid | N13-0047,ctrl | N13-0047,acid | N13-1507,ctrl | N13-1507,acid | rli47,Log | WT,Log | Scott A,37C,Late-Log |
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AKI50623 (L2625_02833) | 18.74 | 4.95 | 12.13 | 15.24 | 8.84 | 7.37 | 19.52 | 7.63 | 15.79 | 3.31 | 6.74 | 0.39 | 0.14 | 15.23 | 11.64 | 0.27 | 8.0 | 5.26 | 4.1 | 17.95 | 20.82 | 18.3 | 15.8 | 28.35 | 15.04 | 17.02 | 10.92 | 18.94 | 25.32 | 23.49 | 20.46 | 25.93 | 7.72 | 5.87 | 20.31 | 45.29 | 25.93 | 16.77 | 31.34 | 28.88 | 18.3 | 18.95 | 20.77 | 27.37 | 26.37 | 36.36 | 12.7 | 12.16 | 13.47 | 17.77 | 21.26 | 8.7 | 18.31 | 14.22 | 13.79 | 11.92 | 12.19 | 25.94 | 0.22 | 7.56 | 6.54 | 6.79 | 6.17 | 11.94 | 1.16 | 8.32 | 19.23 | 0.0 | 0.09 | 6.78 | 9.5 | 13.79 | 4.56 | 9.24 | 26.41 | 4.72 | 23.56 | 5.11 | 11.48 | 7.25 | 3.85 | 5.74 | 14.45 | 14.38 | 32.05 | 3.16 | 3.01 | 19.0 | 11.92 | 9.29 | 8.08 | 10.11 | 9.54 | 12.07 | 12.34 | 14.83 | 5.73 | 4.53 | 3.27 | 0.0 |
AKI50624 (ftsW) | 26.66 | 4.45 | 10.24 | 21.97 | 7.13 | 5.91 | 24.02 | 9.56 | 21.46 | 3.98 | 6.93 | 1.92 | 0.33 | 22.64 | 10.4 | 0.71 | 6.34 | 4.51 | 3.91 | 16.0 | 20.1 | 32.13 | 30.18 | 37.2 | 19.44 | 26.54 | 15.35 | 20.11 | 19.81 | 18.93 | 17.89 | 23.32 | 9.22 | 6.59 | 16.92 | 28.6 | 18.51 | 13.31 | 26.02 | 27.74 | 14.59 | 17.48 | 23.28 | 24.11 | 25.78 | 39.34 | 15.95 | 15.03 | 11.77 | 18.23 | 13.25 | 6.93 | 14.5 | 11.53 | 12.35 | 16.42 | 13.99 | 10.3 | 0.85 | 3.76 | 4.63 | 7.56 | 5.71 | 7.81 | 1.37 | 4.79 | 9.19 | 0.45 | 0.09 | 7.26 | 5.97 | 7.26 | 2.67 | 11.0 | 73.64 | 11.79 | 65.1 | 12.6 | 16.4 | 11.28 | 3.03 | 5.14 | 13.52 | 12.38 | 29.97 | 1.76 | 2.48 | 20.06 | 11.18 | 9.83 | 5.07 | 13.34 | 10.64 | 18.47 | 19.4 | 22.48 | 11.47 | 3.96 | 2.99 | 0.11 |
AKI50625 (mgtA) | 14.49 | 5.73 | 9.8 | 25.25 | 7.2 | 6.78 | 24.83 | 9.93 | 16.88 | 4.5 | 10.37 | 5.3 | 0.76 | 20.11 | 6.73 | 0.45 | 5.58 | 4.73 | 3.35 | 13.81 | 15.69 | 37.04 | 24.96 | 40.18 | 20.7 | 28.29 | 16.04 | 23.06 | 38.87 | 22.32 | 22.48 | 41.9 | 13.05 | 4.74 | 10.88 | 26.23 | 11.44 | 8.42 | 13.62 | 22.69 | 14.15 | 14.88 | 13.82 | 16.1 | 18.9 | 31.63 | 14.8 | 18.43 | 7.6 | 14.17 | 12.36 | 6.43 | 15.26 | 10.31 | 9.06 | 20.67 | 23.77 | 10.93 | 0.33 | 3.55 | 4.8 | 6.15 | 4.18 | 8.1 | 1.85 | 3.37 | 10.74 | 0.49 | 0.57 | 4.0 | 4.71 | 8.54 | 3.96 | 28.76 | 50.64 | 8.18 | 39.94 | 8.92 | 10.1 | 7.03 | 1.26 | 5.82 | 17.54 | 16.77 | 35.19 | 1.42 | 2.2 | 28.71 | 15.14 | 12.01 | 3.92 | 10.42 | 6.19 | 10.21 | 13.25 | 16.52 | 6.81 | 3.36 | 2.03 | 0.5 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)