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Heatmap: Cluster_18 (HCCA)

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Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL16985 (BN171_1040002)
 2.18 0.86 3.83 7.76 3.13 0.53 5.4 0.79 43.35 6.21 2.81 3.54 10.82 2.79 1.25 3.1 3.27 1.32 4.44 1.45 4.08 6.18 2.05 3.0 3.58 0.45 0.86 5.97 4.04
CCL16994 (rbr)
 492.47 915.24 552.15 1215.09 707.83 25995.22 1715.57 562.31 65585.77 943.77 1172.49 1413.03 2891.12 448.66 1090.72 418.68 2739.28 580.77 25740.79 358.17 618.19 1800.83 12821.97 20510.12 32405.4 350.48 22485.06 3451.51 2273.3
CCL16995 (BN171_1060009)
 334.25 476.16 516.88 1075.99 538.38 11733.77 738.23 283.97 49785.0 598.97 730.75 903.29 2820.37 416.77 819.77 390.83 1359.95 399.26 21794.26 323.7 615.4 687.85 16436.98 33527.37 38942.38 224.76 29397.42 3440.61 1467.95
CCL16996 (rbo)
 516.93 931.7 604.93 1309.7 641.4 18783.28 1234.27 478.09 114448.0 616.62 793.0 982.22 3378.79 280.65 1044.95 519.87 2498.9 565.69 39654.26 303.59 601.41 2036.56 26524.7 49312.43 54318.53 265.34 52703.08 4312.77 1744.84
CCL16997 (BN171_1060011)
 55.25 40.41 85.25 192.93 91.61 2199.32 122.4 24.31 3401.7 62.43 78.71 94.48 321.24 43.89 65.37 36.43 114.9 47.13 3756.46 35.57 66.04 259.73 3521.1 2758.79 3581.76 27.08 4385.67 497.2 172.66
CCL16998 (BN171_1060012)
 4.15 4.09 11.56 28.11 14.42 36.08 5.83 1.76 73.88 8.09 6.64 6.18 19.16 4.2 6.99 10.4 5.04 4.4 47.04 14.69 12.33 9.28 43.44 29.42 53.05 6.21 24.3 49.97 3.65
CCL17037 (modA)
 52.79 17.03 52.86 65.19 31.39 5.27 5.54 8.55 210.31 7.3 5.78 9.35 62.54 84.8 16.42 228.6 39.8 10.6 28.19 60.26 22.67 13.06 3.42 80.44 7.02 9.26 6.2 11.75 5.84
CCL17602 (BN171_1600006)
 126.28 291.23 142.34 172.03 75.01 184.03 175.03 89.12 692.58 97.25 70.98 82.78 104.03 91.86 178.95 41.41 107.08 51.01 122.72 179.75 143.26 117.87 81.94 160.52 29.87 76.22 88.37 68.72 63.25
CCL17662 (feoA)
 12.83 13.98 78.22 96.25 103.94 8.58 123.59 7.36 18736.2 39.43 57.62 37.07 318.35 31.9 25.05 24.0 31.16 10.51 172.8 9.74 8.62 8.5 112.18 1207.62 60.85 7.33 1239.89 157.96 41.05
CCL17663 (feoA)
 6.81 7.05 10.95 14.32 13.34 9.08 131.75 7.41 35497.7 49.75 62.05 38.75 423.16 6.13 10.54 20.79 26.64 2.9 216.91 5.03 10.3 23.98 109.24 4325.7 51.02 3.55 1399.62 97.89 25.74
CCL17664 (feoB)
 5.18 6.79 6.38 13.25 5.97 2.56 36.41 3.8 17733.27 13.21 16.65 19.76 579.16 3.5 5.72 14.97 10.53 3.86 80.21 2.65 10.19 16.04 58.78 4875.02 18.83 2.97 4178.19 83.24 22.87
CCL17680 (BN171_1670012)
 167.01 83.37 329.67 247.51 273.46 532.13 222.53 106.27 739.76 210.47 190.01 159.45 314.74 111.32 53.7 398.79 510.13 104.92 421.08 201.8 154.96 181.81 522.12 624.45 551.28 131.83 431.1 167.64 201.5
CCL17681 (proC)
 328.16 198.7 370.66 325.57 354.79 246.08 190.52 176.34 708.29 201.97 170.3 122.67 353.94 234.27 120.16 420.19 389.18 198.07 389.1 357.2 326.53 222.68 477.46 649.62 542.05 211.55 462.52 199.73 166.67
CCL17788 (BN171_1800011)
 2.62 4.71 3.55 4.82 2.21 4.57 5.21 2.75 42.63 9.74 6.6 7.72 12.32 2.28 3.0 6.73 4.32 1.88 3.69 4.78 5.79 1.6 2.11 3.2 2.9 2.34 1.94 2.54 6.06
CCL17860 (BN171_1870001)
 0.0 0.0 0.37 0.21 0.29 2.73 0.0 0.0 3.92 0.0 0.0 0.15 1.03 0.19 0.35 2.35 0.42 0.12 3.12 1.22 1.86 0.0 4.75 6.99 10.43 0.31 0.65 0.0 0.0
CCL17943 (BN171_1970012)
 10.11 1.57 16.05 3.95 13.51 1.52 17.43 13.7 59.86 12.3 11.06 5.81 24.73 58.09 3.83 20.06 7.4 18.12 21.04 56.2 5.78 3.02 3.18 3.13 5.95 8.6 7.54 27.39 8.65
CCL17985 (BN171_200006)
 12.02 19.85 10.31 16.78 6.72 14.02 34.69 7.82 231.07 32.73 29.85 27.97 85.99 12.54 16.36 32.61 36.32 9.07 66.61 13.45 29.62 31.61 52.22 85.9 28.21 6.94 73.4 20.75 25.48
CCL18144 (BN171_2130001)
 185.35 101.68 209.47 117.78 69.44 529.57 265.28 80.64 140.07 198.99 181.62 211.78 161.78 140.82 73.22 194.77 168.2 77.31 284.95 405.69 236.12 173.93 313.26 477.84 495.93 201.97 303.81 226.52 128.51
CCL18219 (BN171_2170006)
 36.93 9.43 47.96 94.6 43.68 10.64 20.87 12.71 178.87 32.38 39.91 29.97 59.85 57.26 14.33 39.04 19.1 28.69 43.6 98.96 28.8 91.78 69.29 55.79 65.85 23.96 40.12 60.58 31.62
CCL18353 (clpB)
 83.46 23.29 99.34 221.89 87.13 30.37 60.8 13.02 4258.72 85.98 66.22 44.5 323.31 66.57 23.66 79.47 104.17 20.13 124.15 66.61 54.04 318.64 67.27 92.83 34.79 19.8 91.46 34.03 41.87
CCL18354 (BN171_2230004)
 1.72 0.26 2.55 4.14 1.39 6.88 10.7 0.19 320.96 33.66 19.58 12.27 112.74 2.66 0.3 22.03 21.56 0.43 28.04 2.28 2.79 1.92 10.65 8.36 4.29 0.33 4.4 10.68 7.72
CCL18355 (BN171_2230005)
 5.57 1.11 10.62 16.33 7.3 13.28 26.62 0.43 1112.7 46.28 36.79 16.87 204.22 8.28 1.57 28.31 101.74 1.21 36.88 11.5 11.16 10.66 31.63 18.7 10.02 2.48 9.1 37.97 22.39
CCL18374 (BN171_2240014)
 0.0 0.0 0.0 0.0 0.0 29.43 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 17.91 46.62 14.6 2.34 26.83 15.34 34.72 20.19 4.39 0.0 0.0
CCL18404 (BN171_2290009)
 28.85 5.13 54.41 61.81 21.27 33.08 190.21 5.27 2201.16 116.86 131.04 118.25 491.04 31.52 4.39 113.38 334.14 9.24 78.18 8.48 13.69 42.57 90.13 49.47 37.7 2.53 87.2 247.6 100.83
CCL18702 (BN171_2570001)
 32.66 11.73 29.8 35.87 28.13 66.36 2.6 27.22 51.61 8.97 14.94 9.91 30.1 59.92 21.47 43.11 76.0 42.24 67.36 36.68 39.8 13.87 79.5 164.63 137.32 47.74 20.69 0.0 15.23
CCL18705 (BN171_2570004)
 66.24 25.78 45.42 20.54 59.81 22.37 34.94 68.42 5943.01 69.57 52.96 39.92 156.8 58.27 23.83 90.93 106.87 90.49 39.73 47.31 11.61 15.08 38.38 109.71 70.99 22.39 36.83 66.1 28.99
CCL18742 (BN171_2600001)
 53.14 97.96 52.1 85.48 50.73 57.87 109.23 40.14 224.07 88.27 75.77 82.63 88.02 41.46 68.89 128.75 90.17 37.67 79.23 83.42 90.45 61.63 114.26 211.16 90.21 47.83 151.36 71.52 79.18
CCL18753 (BN171_2600012)
 31.99 118.89 120.27 355.8 76.22 20.94 26.28 32.46 669.98 23.76 23.74 25.88 57.66 58.48 165.81 18.62 11.59 49.22 55.16 50.8 100.82 72.18 25.96 71.08 27.45 25.03 19.85 112.8 14.42
CCL18883 (dnaJ)
 65.31 35.12 143.72 388.19 197.88 221.88 133.7 76.47 1549.1 231.92 218.04 157.89 425.02 36.39 33.65 349.23 173.05 88.49 149.02 69.12 53.45 1024.41 63.67 164.26 181.72 71.09 136.75 104.94 146.32
CCL18884 (dnaK)
 402.63 152.19 525.64 1135.99 801.19 514.34 697.51 527.67 9315.06 1030.96 904.18 596.21 1755.24 189.38 136.46 947.21 707.01 631.49 596.18 554.25 203.66 2606.95 415.24 664.34 550.95 406.14 565.28 482.91 556.51
CCL18885 (grpE)
 230.77 93.51 275.83 496.71 368.46 760.89 818.71 347.59 4715.61 1094.85 959.6 667.36 1129.69 106.13 81.27 538.92 375.94 335.41 357.31 293.14 109.08 1171.32 265.3 317.3 365.01 219.81 148.25 332.59 534.0
CCL18886 (hrcA)
 47.11 17.51 200.17 299.89 149.62 139.86 240.37 30.17 2810.16 361.96 308.36 179.24 942.99 50.59 25.53 257.95 196.98 59.87 152.73 115.33 76.91 184.21 181.24 151.14 251.63 38.06 114.14 256.32 161.39
CCL18919 (comE)
 0.45 0.18 0.69 0.63 0.27 0.4 5.13 0.23 14.81 1.22 0.44 1.52 2.59 0.29 0.56 1.52 0.54 0.35 1.59 0.27 0.34 4.72 1.38 1.38 0.23 0.22 3.6 3.28 1.42
CCL19165 (BN171_2900020)
 11.29 4.73 8.18 6.33 7.01 3.78 5.53 5.78 34.62 9.27 9.62 7.83 16.54 9.81 3.6 19.76 12.24 7.39 5.5 6.94 2.84 7.58 9.38 8.93 8.05 4.82 1.88 1.42 8.25
CCL19258 (cwp)
 35.52 10.82 26.57 9.5 7.95 11.78 18.73 8.25 148.84 25.49 22.26 18.77 45.15 30.82 9.33 14.87 57.33 8.76 18.48 28.14 6.37 57.26 18.14 21.04 13.56 4.4 35.35 18.1 22.59
CCL19307 (BN171_3020019)
 46.7 68.53 48.34 70.03 28.7 30.25 107.81 23.3 434.3 46.19 43.16 44.3 80.09 40.63 61.8 39.76 43.93 40.53 37.7 46.78 90.05 45.08 74.6 147.25 76.9 22.58 33.76 95.57 37.26
CCL19323 (BN171_3030001)
 187.8 209.38 261.88 417.77 192.84 512.11 322.17 198.02 1220.56 244.93 316.12 257.63 746.63 129.31 81.6 683.26 1394.03 133.56 1155.68 387.52 653.78 451.26 1624.0 1190.24 1087.33 311.87 721.75 318.89 243.6
CCL19342 (BN171_3070008)
 7.84 4.88 58.47 84.6 64.34 17.89 17.47 4.83 74.54 27.78 19.34 20.53 26.78 8.76 6.08 16.27 8.43 5.67 18.01 15.79 11.99 11.49 14.39 4.81 5.53 6.63 2.08 17.79 19.9
CCL19429 (BN171_3140001)
 24.56 19.45 25.0 19.64 11.55 18.41 43.11 11.85 185.81 39.39 30.96 28.46 79.59 23.78 14.55 35.96 36.03 14.61 38.52 23.21 19.51 17.76 41.04 78.16 27.01 5.06 43.76 56.89 29.95
CCL19470 (BN171_3170004)
 35.79 22.96 41.24 32.96 37.93 9.56 34.12 27.76 272.34 42.93 58.02 60.71 61.73 28.99 29.96 96.83 55.4 39.32 37.84 22.14 12.47 33.41 14.44 48.44 37.66 14.28 19.49 34.89 71.27
CCL19630 (BN171_3320004)
 149.95 279.61 118.53 182.0 70.47 65.24 327.52 94.81 759.5 175.35 214.15 194.81 249.88 74.47 207.07 232.22 181.45 118.31 240.23 119.7 176.44 132.84 145.02 389.09 228.59 49.28 346.32 221.45 212.84
CCL19682 (BN171_3390001)
 115.94 228.02 94.58 97.35 102.39 40.19 82.06 104.87 504.83 74.91 62.22 60.61 132.6 68.33 142.5 44.19 66.84 107.9 142.82 121.98 92.66 59.03 93.19 161.44 49.31 86.49 101.79 54.19 50.53
CCL19683 (dapB)
 12.28 28.72 14.57 28.17 10.87 36.91 53.76 14.23 299.42 65.7 64.41 56.89 65.16 13.96 34.92 76.6 25.9 19.67 93.93 35.77 102.47 68.91 60.87 190.34 62.84 17.65 42.29 55.59 43.79
CCL19755 (feoA)
 110.77 384.39 200.02 452.57 211.82 122.51 488.85 160.97 7292.1 395.95 339.98 359.12 970.47 380.63 470.22 442.99 362.54 236.62 891.73 216.42 785.98 611.04 662.49 1515.03 344.06 178.25 1345.06 1727.62 422.73
CCL19764 (pflD)
 40.61 175.95 1536.3 6055.2 2176.47 95.11 238.72 97.27 4438.68 251.68 209.93 213.48 363.96 188.54 1429.33 110.79 82.64 463.32 337.72 51.25 166.88 173.98 123.77 241.42 226.43 70.38 388.06 127.2 155.68
CCL19765 (pflE)
 15.58 59.95 800.02 1914.63 1110.46 45.37 100.42 37.07 1696.09 111.73 106.11 106.76 132.64 83.85 456.51 53.18 44.43 200.26 206.46 33.51 72.54 64.28 77.59 80.09 105.15 49.59 67.74 41.71 67.26
CCL19831 (BN171_3520017)
 28.62 35.48 26.09 31.13 22.79 55.57 71.15 19.05 149.09 62.13 54.21 47.28 75.71 26.01 39.94 73.31 30.18 29.63 89.96 65.59 103.8 20.91 74.92 108.91 73.23 45.86 36.16 60.69 35.56
CCL20456 (BN171_50004)
 99.12 63.19 134.77 119.66 130.18 67.07 175.76 59.78 2089.71 182.93 197.36 221.52 122.42 53.64 51.5 44.85 78.2 75.07 370.12 88.86 41.25 72.56 521.42 141.1 32.43 39.84 69.48 114.28 200.86
CCL20457 (mcsA)
 102.78 60.16 129.36 143.86 117.85 62.81 175.14 50.81 6668.0 165.64 188.09 198.73 265.22 52.88 71.2 96.92 106.98 77.16 534.75 89.48 58.41 149.99 717.74 202.45 49.63 43.14 143.54 131.81 218.8
CCL20458 (mcsB)
 87.49 66.61 108.43 115.47 99.22 84.89 160.62 65.37 5692.03 166.55 184.41 224.19 256.59 54.34 72.82 95.63 102.79 75.17 495.08 87.6 46.56 246.72 637.43 165.29 46.8 37.22 171.48 102.46 224.16
CCL20459 (clpC)
 110.92 54.39 113.99 141.13 111.77 121.97 229.11 66.66 8798.33 209.19 221.47 280.92 419.63 80.4 68.23 181.54 220.83 80.38 954.7 135.76 67.86 741.93 1086.86 248.06 104.58 64.83 565.49 163.4 281.32
CCL20509 (BN171_590007)
 21.33 19.6 20.2 18.47 9.01 50.99 29.56 11.52 473.97 41.71 35.52 36.27 172.87 19.61 18.96 121.02 85.22 13.22 141.61 10.77 20.82 5.7 174.59 127.37 109.58 6.62 101.78 113.89 38.24
CCL20684 (BN171_900004)
 8.31 12.48 22.36 21.88 23.13 9.83 9.47 9.33 54.1 22.41 16.81 13.21 10.3 16.58 18.55 8.91 8.1 12.42 15.87 49.4 10.99 32.47 6.18 1.68 4.16 7.51 5.45 14.78 13.88
CCL20736 (BN171_960028)
 979.92 1609.31 1149.01 3488.29 1371.84 1730.33 153.45 309.33 6763.5 71.97 88.68 191.07 1571.8 890.18 2581.28 424.93 890.99 1053.83 1845.69 3916.53 4777.39 1225.7 2226.18 1706.04 436.15 1466.11 1404.01 714.34 73.09
CCL20737 (BN171_960029)
 246.14 1074.73 251.2 890.32 291.79 534.02 408.46 302.32 2879.56 415.14 250.51 311.84 1149.55 200.0 969.92 634.26 314.91 270.57 795.95 733.16 1082.98 1481.68 763.07 1195.86 282.96 352.21 762.77 356.88 188.5
CCL20738 (BN171_960030)
 459.49 2230.6 425.54 1974.74 425.48 253.38 814.81 446.47 4119.65 422.85 403.58 431.69 1447.9 241.81 1885.08 692.52 684.46 482.64 1213.64 1150.38 2820.41 3738.77 939.88 2256.41 534.73 673.88 1181.67 465.93 375.53
CCL20749 (BN171_980004)
 15.26 22.02 22.53 29.39 21.74 38.42 45.47 18.71 70.22 52.48 40.13 40.97 58.85 13.99 19.01 49.31 25.07 18.43 57.58 34.48 45.66 26.03 74.43 46.08 47.98 20.3 41.51 39.76 41.01

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)