Heatmap: Cluster_19 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA46830 (VCV51_033900)
69.39 76.74 27.51 48.64 46.65 51.23 57.53 43.86 68.33 89.78 59.91 152.59 128.91 77.04 55.04 199.27 139.07 50.49 58.37 75.85 52.38 66.04 132.98
KNA49648 (VCV51_030204)
30.89 8.94 47.41 13.54 92.31 83.44 88.39 93.95 9.61 39.27 14.64 45.83 36.81 6.71 11.39 79.92 73.19 10.08 12.19 10.98 10.88 12.19 51.02
KNA49649 (VCV51_030205)
39.6 9.95 62.06 18.07 146.23 140.83 152.67 149.85 29.93 53.7 38.59 94.76 54.21 7.54 19.41 58.73 60.14 10.97 14.59 26.36 24.56 33.68 52.34
KNA50293 (VCV51_031449)
19.72 15.63 9.56 7.61 68.04 69.07 72.07 68.49 9.16 75.0 21.4 54.36 90.77 14.96 11.79 80.97 72.83 10.64 11.02 9.09 8.65 16.53 111.24
KNA50304 (VCV51_033683)
154.79 143.23 94.2 103.72 234.12 207.95 215.73 226.99 72.38 310.61 255.75 511.07 455.62 114.78 238.97 372.85 330.2 89.82 99.08 73.91 69.3 76.73 395.38
KNA51141 (VCV51_033634)
33.37 28.82 35.2 25.91 21.61 23.02 23.62 18.85 37.8 36.44 22.87 51.7 43.16 25.51 23.22 145.22 93.58 29.24 34.67 44.24 71.42 37.7 103.04
KNA51160 (VCV51_033618)
25.56 7.38 10.63 11.85 22.1 23.64 23.68 21.01 11.48 27.76 9.13 21.05 23.57 6.2 7.82 41.68 27.62 8.2 8.33 13.07 15.02 20.18 33.57
KNA51161 (VCV51_033619)
14.92 3.95 5.54 7.58 6.72 7.31 6.52 5.56 12.1 12.91 3.82 16.82 9.77 3.74 3.22 21.45 18.54 8.41 8.84 12.12 14.35 15.78 23.97
KNA51162 (VCV51_031675)
19.23 4.72 4.77 16.98 5.66 6.8 7.1 4.89 17.39 19.69 4.46 12.96 12.46 5.25 3.49 27.71 20.14 9.92 9.45 15.13 13.38 14.88 17.93
KNA51168 (VCV51_031670)
67.29 87.76 38.68 45.67 127.26 129.99 138.29 114.75 101.06 174.2 116.99 196.29 203.9 70.83 223.57 223.22 118.35 63.46 81.08 89.65 71.46 101.07 247.44
KNA51653 (VCV51_031507)
375.33 91.32 503.79 316.19 1152.35 1014.82 962.0 1166.72 180.51 758.84 243.53 537.0 802.46 78.38 375.13 827.04 623.13 141.06 155.83 198.96 359.9 186.52 1329.64
KNA51654 (VCV51_031506)
6.24 12.63 5.31 5.49 23.97 26.25 27.14 23.03 14.53 23.66 15.25 17.03 21.82 14.68 15.42 31.76 24.65 10.21 10.92 12.37 16.62 11.9 59.92
KNA51664 (VCV51_031497)
74.63 11.68 95.21 37.32 377.19 377.72 411.61 389.45 120.1 70.22 54.14 106.05 89.12 10.67 27.62 180.28 142.91 18.14 20.49 108.44 97.79 117.86 286.59
KNA51665 (VCV51_031496)
83.39 9.5 123.38 44.29 471.41 476.48 517.43 469.17 126.64 78.9 65.46 150.94 110.13 8.34 22.96 124.5 105.14 15.58 18.04 100.84 101.7 123.0 266.71
KNA51666 (VCV51_031495)
52.4 114.52 133.35 36.67 282.52 239.21 256.41 241.13 45.86 332.54 154.51 239.19 324.67 105.46 114.53 199.2 192.3 63.31 81.0 45.26 44.78 42.11 423.31
KNA51842 (VCV51_030378)
79.24 112.39 114.5 46.94 357.16 294.42 295.97 344.87 53.99 154.06 168.57 229.56 158.33 98.66 167.61 212.03 251.36 119.26 115.35 48.69 48.48 53.15 524.43
KNA52288 (VCV51_033455)
176.04 114.35 224.3 205.43 318.51 268.35 250.67 296.69 111.9 109.85 198.58 102.44 92.59 100.51 83.64 127.72 147.73 68.63 66.8 90.99 85.01 83.93 438.92
KNA52484 (VCV51_030145)
40.29 18.68 52.41 32.32 126.48 102.68 93.31 120.34 23.08 36.62 81.3 33.79 52.43 17.0 80.84 31.7 33.86 31.38 42.63 21.96 22.3 21.0 223.02
KNA52695 (VCV51_031527)
47.76 38.05 20.6 23.71 337.99 285.15 343.15 308.65 51.6 108.21 73.11 82.11 161.84 41.13 19.63 80.88 68.3 15.53 17.82 44.51 44.94 63.56 140.89
KNA52747 (VCV51_033380)
259.56 138.9 334.26 202.53 548.65 566.32 577.58 548.41 150.3 653.06 243.8 390.23 610.86 136.61 144.38 630.68 480.16 70.0 68.42 175.93 181.71 171.55 265.96
KNA53025 (VCV51_033352)
155.78 18.59 58.25 105.04 11.34 9.55 10.45 8.73 143.54 18.85 11.31 54.82 34.5 16.72 10.53 291.69 197.97 44.52 45.41 116.65 87.19 92.08 57.8
KNA53026 (VCV51_031603)
71.74 11.11 40.31 40.08 8.62 9.96 10.78 8.33 59.55 30.65 10.02 34.08 39.49 9.27 8.75 136.92 86.92 21.58 23.07 44.21 33.11 33.44 43.1
KNA53027 (VCV51_031602)
20.98 10.47 13.9 14.96 14.76 19.94 22.15 13.07 21.39 28.64 13.14 42.91 24.29 9.87 23.86 69.93 41.33 11.59 14.5 18.15 12.41 15.49 42.92
KNA53028 (VCV51_031601)
10.0 34.36 6.39 7.42 11.8 11.71 13.96 10.95 9.0 21.74 17.54 34.81 21.39 32.86 16.2 62.93 47.23 12.45 14.31 7.87 8.24 10.15 42.82
KNA53029 (CobD)
15.23 26.68 13.67 9.39 10.94 10.8 11.23 10.1 11.61 24.54 21.74 54.71 18.22 24.5 23.07 47.26 30.41 8.71 10.94 10.42 12.56 14.98 45.2
KNA53038 (VCV51_031591)
41.54 19.41 26.35 30.31 26.17 23.67 25.37 23.14 49.43 25.1 28.93 40.07 26.97 18.78 27.4 80.54 48.13 39.32 45.12 46.77 36.82 45.49 56.62
KNA53288 (FtsQ)
300.98 302.68 216.42 195.92 258.78 266.33 255.72 265.74 326.29 218.14 211.31 378.26 271.53 331.58 302.84 744.5 481.93 253.05 240.98 348.63 563.55 409.56 644.43
KNA53289 (FtsA)
233.32 305.74 115.46 143.42 167.46 162.17 167.9 146.1 228.24 183.37 166.57 259.44 193.72 313.98 163.26 447.97 275.54 216.93 238.49 220.53 309.7 273.9 243.35
KNA53292 (VCV51_033346)
37.83 13.84 23.65 28.59 36.19 44.67 45.34 38.58 39.0 53.88 32.94 55.05 55.74 11.91 64.45 130.65 88.92 40.81 41.74 34.48 40.88 42.25 68.29
KNA53679 (VCV51_030034)
37.28 4.8 37.75 16.86 131.93 122.62 132.87 131.57 50.18 37.06 26.27 52.82 50.89 4.45 16.38 68.53 72.56 13.1 16.05 41.28 37.92 49.33 86.52
KNA53680 (VCV51_033286)
51.31 6.18 88.57 25.86 315.54 312.43 335.73 325.92 74.88 77.77 58.22 142.26 101.31 6.0 24.32 155.87 176.0 16.62 19.72 53.02 61.35 80.62 167.06
KNA53878 (VCV51_030814)
19.24 11.72 9.26 11.68 39.7 47.04 48.75 31.27 21.37 19.34 16.01 35.08 22.56 11.28 23.94 33.92 26.81 7.42 8.87 17.8 12.73 19.51 52.88
KNA53920 (VCV51_033255)
28.51 3.51 18.52 18.45 50.69 48.76 48.19 50.88 17.21 35.89 17.61 38.07 27.59 4.2 9.88 45.83 37.49 19.8 20.44 17.55 17.39 15.99 26.62
KNA54630 (VCV51_030730)
19.91 8.99 21.76 12.75 46.76 54.71 48.49 32.25 21.92 35.9 16.31 32.38 37.46 10.37 26.43 46.79 38.95 29.52 30.84 21.82 23.22 24.13 52.7
KNA54826 (VCV51_031693)
17.33 12.65 37.65 15.02 142.91 152.22 150.91 142.23 16.05 82.64 109.55 40.68 160.34 12.93 42.43 27.29 20.37 73.84 92.26 19.17 11.81 16.02 144.56
KNA54827 (VCV51_031692)
25.53 22.39 54.72 22.25 107.46 123.02 127.85 109.16 37.69 71.49 147.33 71.49 125.83 24.82 28.75 43.62 32.55 62.22 84.15 39.57 25.08 37.85 243.28
KNA54836 (VCV51_031685)
30.87 20.8 7.96 23.6 24.35 22.82 27.35 21.95 20.83 30.85 21.9 38.9 25.44 18.62 8.02 73.69 40.54 27.54 27.83 24.44 19.44 27.4 17.54
KNA54838 (VCV51_031683)
71.12 39.71 34.21 50.99 76.26 75.91 76.54 72.99 72.24 50.75 41.5 64.51 54.57 38.41 43.9 123.22 75.56 56.99 57.71 60.65 62.79 64.21 108.44
KNA54891 (VCV51_031801)
26.23 11.62 20.44 20.8 50.96 49.39 57.83 47.02 36.86 61.4 29.64 47.91 60.3 9.54 17.43 22.33 28.07 26.45 25.46 32.09 28.55 38.58 81.46
KNA54958 (VCV51_031750)
610.04 533.81 290.5 429.28 1176.8 1491.09 1501.96 1126.56 717.15 1115.39 883.45 545.88 1421.85 437.06 796.08 596.02 696.83 676.62 765.64 669.06 606.94 657.15 2732.17
KNA55020 (VCV51_033188)
284.49 79.92 241.91 232.64 441.1 396.35 374.59 419.49 187.16 195.46 193.47 165.01 225.86 68.44 133.26 505.86 437.32 292.1 269.39 200.88 245.02 210.42 387.83
KNA55122 (VCV51_031821)
7.09 2.05 6.75 4.94 35.47 28.83 34.6 37.32 7.61 11.25 13.79 16.0 23.41 1.8 4.68 11.22 11.81 9.52 9.82 7.15 7.42 8.24 111.5
KNA55228 (VCV51_031073)
5.01 2.75 1.23 4.35 6.33 6.36 6.53 5.66 4.39 5.27 5.15 3.15 4.7 2.81 2.46 5.62 4.06 5.62 5.16 3.71 3.02 4.7 3.88
KNA55278 (VCV51_033091)
25.75 14.35 10.28 25.81 57.5 53.62 54.82 52.36 34.41 27.01 27.45 30.37 20.27 13.16 22.14 38.83 35.64 19.03 17.64 33.2 26.16 34.39 38.49
KNA55283 (VCV51_033096)
73.09 58.32 33.19 49.08 102.26 114.91 123.88 113.23 121.43 144.28 97.74 199.49 141.25 56.77 52.23 151.54 121.63 105.2 103.39 116.23 105.75 122.82 54.32
KNA55679 (VCV51_033022)
41.61 52.2 29.3 44.94 65.01 69.97 73.14 56.27 35.07 42.36 24.53 54.64 39.96 55.82 43.09 74.97 72.88 18.39 19.58 28.55 24.4 28.72 70.17
KNA56151 (VCV51_030891)
40.55 8.09 34.24 26.46 91.15 87.86 89.18 90.23 34.74 85.81 37.5 91.49 77.43 7.51 24.98 97.37 78.97 26.6 28.98 29.11 22.76 37.45 80.89
KNA56236 (VCV51_032974)
125.64 111.99 129.86 87.31 426.29 375.17 403.08 426.32 165.97 116.84 119.21 145.25 124.5 133.38 76.85 191.31 151.53 127.04 135.69 163.96 149.74 168.97 222.37
KNA56237 (VCV51_030705)
44.26 15.52 42.26 27.22 184.88 177.18 198.62 185.19 45.51 95.78 47.69 93.57 105.87 15.23 28.07 105.24 83.23 64.48 76.09 47.03 41.9 49.42 99.39
KNA56241 (VCV51_032977)
55.35 37.29 252.73 50.46 333.5 269.5 352.59 304.5 48.64 72.07 94.57 89.8 99.04 44.82 60.06 381.3 345.5 180.44 109.37 52.91 58.22 49.47 265.4
KNA56276 (VCV51_032899)
17.18 18.28 18.0 13.71 51.38 39.82 42.94 54.57 21.41 13.11 17.67 27.86 29.67 29.3 6.44 78.06 64.09 36.84 38.81 18.94 19.94 19.68 54.65
KNA56418 (ToxS)
135.16 76.49 28.07 90.31 205.79 199.46 194.99 195.45 169.67 157.54 142.95 155.74 120.83 91.7 78.07 202.97 168.89 127.22 143.84 134.38 134.97 145.11 94.39
KNA56879 (VCV51_030514)
96.07 75.95 72.69 82.25 93.93 79.32 88.67 96.95 196.82 95.56 162.16 229.8 129.22 73.35 87.42 166.24 212.25 184.02 224.63 138.34 131.61 165.58 288.98
KNA56880 (VCV51_030515)
67.11 92.18 81.42 46.69 171.37 154.44 163.16 182.6 77.02 111.01 158.1 157.62 142.78 96.3 116.82 133.01 134.18 110.13 141.64 65.98 68.12 76.83 224.83
KNA56971 (VCV51_030589)
62.88 3.9 47.33 26.73 153.4 132.76 143.49 147.76 34.43 60.15 19.4 90.14 90.65 3.8 14.29 96.42 75.03 28.9 36.16 35.99 33.23 53.78 78.82
KNA57717 (VCV51_032830)
618.79 833.4 770.13 402.99 1867.24 1810.42 1755.96 1937.26 411.85 704.82 1038.27 1244.41 712.45 821.74 1032.29 731.11 816.95 256.48 296.71 383.62 346.85 436.62 4109.57
KNA58150 (VCV51_032767)
198.52 33.28 102.96 129.87 410.89 444.22 474.17 354.77 192.21 311.8 197.2 286.44 256.58 31.89 36.22 413.97 434.59 38.48 39.76 167.87 118.55 240.07 139.79
KNA58151 (VCV51_032768)
154.5 43.12 40.65 87.86 282.32 360.26 382.53 263.75 298.97 250.88 204.51 269.95 210.42 39.54 34.27 465.92 483.88 40.64 44.09 227.16 155.39 356.62 114.93
KNA59333 (VCV51_031343)
34.37 25.47 14.42 20.41 77.44 77.53 84.27 74.1 56.48 57.35 31.93 42.56 70.22 24.01 14.59 55.76 46.62 30.89 32.86 55.4 46.35 55.58 45.53
KNA59381 (VCV51_031309)
49.98 30.68 33.45 27.25 170.21 173.7 196.34 159.52 67.44 87.43 67.13 126.78 108.49 24.42 40.08 76.46 67.1 77.84 87.03 62.31 33.98 63.98 116.78
KNA59398 (VCV51_032578)
138.66 173.64 31.6 94.83 227.11 282.5 265.64 232.07 141.5 200.3 109.41 47.4 164.05 182.24 34.71 54.22 55.21 36.08 29.7 134.81 136.52 147.77 6.14
KNA59410 (VCV51_032590)
29.28 61.5 47.98 23.16 291.56 271.51 280.81 294.15 48.41 207.33 133.85 166.48 208.73 60.04 105.45 207.41 161.87 54.73 66.82 45.18 34.95 42.88 398.84
KNA59415 (VCV51_032596)
769.21 161.13 571.62 499.45 1577.48 1362.61 1231.76 1616.46 542.23 410.21 282.66 428.74 519.64 158.82 141.83 1009.6 909.61 69.67 71.47 522.64 510.72 565.83 841.48
KNA60789 (VCV51_032051)
9185.21 4636.61 16947.38 6706.73 19667.13 16175.68 14459.75 20642.07 3090.78 13756.58 6339.83 6939.45 12795.73 4312.98 4880.46 21082.22 28970.38 2361.9 2755.74 3366.25 4058.44 3831.94 32867.6

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)