Heatmap: Cluster_43 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA55364 (VCV51_031056)
-0.05 -0.87 -1.03 -0.42 -0.39 0.66 0.85 -0.52 0.05 -0.76 -0.64 -0.59 -2.27 -0.52 -3.42 0.36 0.05 0.67 0.92 -0.02 0.07 0.08 1.37
KNA58547 (TorD)
-0.67 -1.83 -1.87 -1.34 -0.72 2.62 1.69 -1.1 -0.4 0.03 -1.28 -0.19 0.06 -2.17 -1.19 0.13 0.05 -0.84 -0.79 -0.48 -0.59 -0.34 -0.35
KNA58575 (VCV51_032732)
-2.26 - -6.19 -2.21 -1.45 3.65 2.58 -1.96 -5.15 0.43 -4.64 -0.66 -1.12 -4.71 -4.38 -3.46 -4.05 -2.34 -2.7 -4.15 -3.7 -4.76 -3.49
KNA58576 (TorC)
-1.49 -2.34 -3.31 -2.05 -1.72 3.07 2.11 -2.17 -1.06 -0.38 -2.72 -0.23 -0.91 -2.26 -2.58 -0.48 -0.65 0.19 0.36 -1.03 -1.32 -0.78 -1.1
KNA58577 (TorA)
-0.07 -1.53 -1.42 -0.58 -2.07 1.74 0.89 -1.95 -0.74 -0.09 -2.03 0.89 -0.69 -1.59 -0.92 0.44 0.28 1.08 1.25 -0.79 -0.64 -0.37 -0.39

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.