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Heatmap: Cluster_21 (HCCA)

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Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA44435 (VCV51_033951)
 141.45 832.92 182.1 127.62 383.61 307.23 329.33 343.96 188.79 627.69 362.92 411.24 453.33 598.36 156.76 421.53 384.34 131.84 150.69 180.73 155.15 158.36 321.7
KNA48532 (VCV51_030202)
 56.85 117.17 54.42 22.28 105.64 81.56 85.87 97.71 36.35 67.9 122.31 110.72 79.71 103.15 128.36 127.75 157.71 34.93 36.77 33.54 48.14 45.06 278.45
KNA49503 (VCV51_030307)
 8.08 3.51 7.85 6.86 2.03 2.19 2.12 1.83 7.8 3.32 3.64 4.02 3.91 2.87 4.28 8.6 10.27 12.3 13.07 6.56 5.62 8.34 4.86
KNA49658 (VCV51_033774)
 13.53 3.75 4.72 6.66 6.32 5.41 6.96 5.82 4.21 14.34 8.94 12.2 12.71 3.55 3.95 17.55 19.22 10.23 12.65 3.85 5.18 6.0 11.4
KNA49659 (VCV51_033775)
 14.41 1.81 3.7 8.96 5.02 5.11 6.65 5.71 5.73 8.41 6.86 5.39 8.89 1.77 7.56 12.66 14.38 7.18 7.98 7.41 6.17 8.26 10.63
KNA49660 (VCV51_033776)
 4.27 1.23 1.71 3.18 2.63 2.48 3.15 2.55 2.28 4.86 2.51 3.95 4.19 1.04 4.03 4.73 5.65 4.61 5.05 2.23 2.58 2.79 2.8
KNA50303 (VCV51_033682)
 64.0 173.3 19.09 39.06 144.56 139.78 137.18 131.44 131.65 146.51 109.54 108.41 150.13 145.99 63.3 93.32 82.46 81.2 91.27 140.54 116.06 142.24 49.78
KNA50316 (VCV51_031440)
 86.98 202.9 51.93 52.82 166.05 162.28 149.19 151.27 158.69 123.46 147.04 133.56 177.12 178.0 81.12 233.2 207.34 127.78 175.21 184.62 118.04 178.78 421.99
KNA50317 (VCV51_031441)
 155.66 125.26 201.51 111.24 318.06 307.36 265.33 289.43 76.42 180.29 181.03 258.25 255.22 98.63 115.73 557.51 560.68 111.47 135.94 96.2 65.04 89.6 831.87
KNA50381 (VCV51_031413)
 26.89 38.49 20.54 26.04 21.39 19.67 21.44 19.18 28.98 54.63 38.09 72.83 52.93 29.94 42.73 49.58 38.69 44.36 50.24 32.81 28.93 35.69 87.47
KNA51151 (VCV51_031641)
 286.65 601.1 168.81 152.21 329.51 351.74 369.59 342.82 332.48 385.37 344.76 409.36 356.85 547.08 343.41 379.83 243.31 331.98 357.29 350.85 378.17 461.19 562.25
KNA52109 (VCV51_033478)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07 22.33
KNA52219 (VCV51_033477)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.07 22.33
KNA53054 (VCV51_031580)
 346.74 799.68 394.29 266.27 380.47 270.89 326.44 349.5 268.76 655.21 603.1 889.0 527.54 434.25 832.32 573.9 347.18 186.27 296.18 227.74 176.47 269.81 1632.36
KNA53055 (VCV51_031578)
 89.13 289.13 126.96 90.55 74.83 77.89 76.8 73.14 103.76 529.17 173.96 219.76 387.1 200.14 350.89 459.74 280.78 79.61 103.01 96.24 82.35 81.97 253.5
KNA53056 (VCV51_033361)
 17.05 263.28 15.23 16.63 7.18 7.72 8.18 6.97 15.26 162.08 75.49 99.37 97.56 185.85 127.03 151.05 93.93 24.29 31.23 12.35 9.97 12.48 40.28
KNA53057 (VCV51_031574)
 66.32 336.67 48.16 66.76 12.16 14.45 15.39 13.04 64.82 283.22 173.18 247.37 174.1 234.01 177.82 262.43 159.95 60.69 71.13 59.24 44.07 53.96 87.39
KNA53787 (VCV51_033262)
 47.25 23.51 40.12 30.5 50.72 45.85 50.26 46.38 21.72 47.72 53.68 43.92 67.29 19.69 50.9 41.57 50.35 23.91 27.91 22.44 31.35 28.78 57.12
KNA53788 (VCV51_031850)
 26.13 20.66 15.43 15.68 17.82 17.54 19.15 16.52 21.37 16.29 21.96 31.47 19.76 18.36 17.29 25.32 31.87 11.57 12.69 20.51 26.19 27.83 30.32
KNA53789 (VCV51_033263)
 33.83 26.08 29.96 18.03 26.26 24.15 26.85 21.99 20.42 15.21 29.66 47.57 20.96 22.97 20.27 25.77 36.57 7.72 9.11 20.33 26.33 28.89 20.11
KNA53793 (VCV51_031854)
 55.11 125.98 94.75 55.62 7.54 7.84 7.39 6.62 39.13 97.4 121.99 205.79 31.26 97.88 176.69 58.35 95.04 6.19 9.09 42.96 49.28 38.01 10.72
KNA53872 (VCV51_030810)
 35.95 53.9 21.85 32.57 52.99 49.89 48.56 46.48 58.44 45.71 33.47 63.3 36.36 55.81 32.75 47.57 44.34 19.92 24.33 50.95 57.9 48.1 90.36
KNA53875 (HexR)
 257.26 151.63 81.72 121.05 233.22 245.46 242.26 220.06 267.2 287.31 160.56 243.53 331.61 130.3 164.23 384.98 316.29 217.61 255.54 305.66 371.04 350.62 466.9
KNA54641 (VCV51_030738)
 123.11 23.65 56.51 90.26 161.77 148.4 143.51 170.98 77.76 15.92 83.26 117.36 21.24 19.46 161.05 116.34 111.31 22.02 22.22 54.19 77.47 75.93 174.71
KNA54647 (VCV51_033218)
 23.6 29.15 13.38 23.65 53.17 45.12 46.13 51.22 37.89 14.26 31.92 42.12 14.08 22.51 63.75 33.13 25.36 18.17 18.76 33.49 28.61 30.03 50.81
KNA54880 (VCV51_031810)
 157.48 194.29 63.19 112.52 6.04 7.22 8.29 5.49 114.55 172.88 175.68 294.03 284.0 127.48 87.3 441.19 660.44 26.41 38.63 135.57 83.73 100.54 1064.16
KNA54881 (VCV51_031809)
 640.29 2149.88 134.0 409.01 13.85 19.17 22.08 9.66 577.41 696.26 879.66 804.04 1016.57 1705.8 2029.28 1342.61 2226.34 450.48 689.59 684.55 463.9 572.29 1677.23
KNA54884 (VCV51_031807)
 61.94 71.14 33.17 35.6 63.15 50.74 56.19 61.64 73.22 33.47 69.16 85.15 35.0 65.25 66.68 73.82 101.73 56.8 56.18 70.78 65.58 92.45 127.71
KNA54901 (FtsN)
 111.66 67.81 67.41 58.88 50.62 49.6 50.78 46.09 79.97 47.5 86.45 173.14 60.07 62.23 83.7 180.69 209.47 131.31 141.65 76.3 90.35 99.96 125.86
KNA54906 (VCV51_031791)
 8.24 10.57 5.14 5.72 7.76 7.08 8.33 7.21 7.51 7.64 7.48 21.27 6.51 10.63 9.37 14.02 19.47 17.56 20.44 7.08 7.73 8.37 15.83
KNA54933 (VCV51_033141)
 87.13 77.61 73.31 74.25 104.74 80.95 79.21 75.42 126.99 77.97 46.94 44.74 118.22 75.81 65.04 119.48 174.07 97.92 110.17 121.95 108.33 109.87 198.46
KNA54946 (VCV51_031761)
 31.45 60.72 17.49 23.18 53.3 53.37 53.76 53.67 27.7 28.88 60.24 58.98 25.15 61.16 64.99 38.39 45.05 26.65 28.62 26.23 36.02 30.76 118.15
KNA55005 (VCV51_031732)
 18.9 84.86 66.84 23.52 19.32 19.41 20.45 16.71 32.3 76.16 106.37 104.63 56.56 56.98 54.57 53.97 43.83 16.16 23.93 34.46 21.44 16.74 66.18
KNA55086 (VCV51_031847)
 33.53 29.78 21.08 31.59 13.7 13.86 14.07 14.05 25.66 35.36 33.48 58.29 48.99 33.51 21.52 51.6 67.67 27.25 30.38 24.97 66.65 33.28 37.46
KNA55121 (VCV51_031822)
 15.12 15.8 5.79 8.61 9.44 8.95 9.5 9.5 8.38 17.62 19.17 26.15 19.03 11.15 20.36 29.46 36.55 18.42 21.18 9.11 9.18 10.25 30.74
KNA55223 (VCV51_031068)
 118.12 44.62 11.46 84.25 49.0 51.57 54.29 44.15 243.25 92.13 69.33 110.94 103.12 41.74 84.55 106.34 100.55 80.39 95.89 196.03 223.1 280.19 118.02
KNA55224 (VCV51_031069)
 23.5 24.47 5.6 16.32 21.13 20.81 20.69 19.9 38.59 24.43 27.04 27.63 22.13 25.09 95.3 31.31 27.99 25.55 27.16 32.43 30.78 45.23 30.49
KNA55225 (VCV51_031070)
 57.42 50.42 38.74 46.99 34.15 37.8 39.06 33.74 65.96 96.69 67.15 85.87 115.58 46.43 168.13 142.41 140.94 43.97 63.04 70.25 51.76 71.03 85.76
KNA55226 (VCV51_031071)
 49.29 29.9 30.03 45.74 30.26 24.04 27.97 25.86 30.78 55.86 39.79 64.7 75.09 29.26 107.83 100.39 95.01 21.52 27.1 33.94 23.56 32.07 43.92
KNA55227 (VCV51_031072)
 33.14 81.63 9.24 22.54 62.25 71.82 72.57 69.14 71.98 43.1 80.98 51.89 47.0 78.76 55.28 85.26 64.1 64.88 69.8 65.18 50.1 71.39 113.69
KNA55249 (VCV51_033062)
 117.88 148.7 148.06 46.13 84.79 110.56 131.69 68.82 76.14 129.04 154.72 136.4 163.16 117.21 113.87 146.54 134.21 23.13 34.24 77.49 67.23 141.86 365.34
KNA55355 (VCV51_031047)
 12.61 5.42 3.66 8.12 12.04 12.81 12.35 10.37 18.83 18.29 5.49 15.0 16.2 5.44 3.75 18.82 17.07 11.71 13.22 15.63 16.55 17.08 23.96
KNA55686 (VCV51_033024)
 39.93 87.66 35.04 38.16 66.38 71.82 72.75 65.84 119.42 57.76 74.69 65.68 56.96 77.54 60.52 75.65 63.92 70.3 78.76 104.37 98.2 83.12 121.31
KNA55995 (VCV51_032999)
 6.98 5.47 2.48 5.29 7.61 6.32 6.79 5.8 9.23 7.69 5.24 8.69 10.95 4.43 3.75 12.11 11.31 7.69 7.84 8.74 7.86 9.88 24.97
KNA56283 (VCV51_032901)
 203.01 362.05 146.12 113.64 499.87 462.17 490.18 454.88 317.26 444.28 325.08 422.1 421.47 360.38 342.13 127.7 118.92 216.18 250.75 304.08 257.45 357.71 203.22
KNA56378 (VCV51_032943)
 66.27 23.13 37.02 67.19 81.09 68.69 69.01 78.28 39.29 37.24 63.87 73.8 33.17 23.79 36.14 44.44 48.14 19.31 21.14 41.86 45.88 41.42 88.19
KNA56379 (VCV51_032944)
 12.18 22.45 3.86 8.46 4.47 5.05 5.41 4.94 30.34 14.77 18.91 28.55 31.19 21.26 14.28 23.42 25.83 5.51 7.29 26.23 21.27 25.19 59.48
KNA57443 (MutH)
 14.48 21.63 5.85 9.1 14.32 16.9 17.52 15.0 35.58 29.78 25.21 35.31 28.92 21.55 25.93 23.1 24.2 20.89 21.82 29.99 21.27 29.77 30.89
KNA57616 (VCV51_030427)
 63.32 15.01 25.48 65.34 80.41 81.33 76.88 79.49 33.03 80.66 36.56 93.44 70.53 13.64 114.03 85.19 94.98 77.59 68.53 31.58 31.96 32.96 215.19
KNA58251 (VCV51_032759)
 71.73 83.94 41.55 39.15 141.61 174.41 178.4 133.66 141.65 63.84 44.62 116.57 54.92 70.03 124.41 95.33 84.6 70.18 77.62 135.02 60.31 184.13 209.73
KNA58521 (VCV51_032720)
 33.1 25.8 9.16 21.26 33.67 37.61 36.26 30.02 58.59 39.88 18.64 39.41 47.93 25.69 6.25 67.64 56.86 21.37 24.68 52.23 44.47 53.08 81.5
KNA58954 (VCV51_031245)
 0.52 45.26 0.16 0.23 0.42 0.74 0.59 0.23 0.81 0.78 26.13 26.48 0.48 76.35 196.62 203.25 144.54 0.19 0.37 0.33 0.79 0.37 262.46
KNA59418 (NhaB)
 112.44 213.03 47.5 63.25 101.15 110.46 114.82 88.06 94.03 89.84 140.93 159.72 134.73 215.27 50.13 171.78 149.13 74.79 108.77 89.72 69.01 120.11 291.72
KNA59437 (VCV51_032603)
 63.15 38.81 20.28 25.77 32.22 37.54 39.36 26.16 41.92 65.78 38.04 61.68 47.71 29.67 46.32 51.7 43.6 35.31 35.61 92.92 35.67 113.62 98.03
KNA59649 (NhaC)
 174.13 152.67 106.47 106.36 27.17 21.19 21.65 28.25 80.01 209.8 393.41 390.86 183.98 118.3 194.61 369.61 282.55 17.76 22.23 99.61 109.22 93.11 537.61
KNA59651 (VCV51_031365)
 28.31 44.2 10.04 20.74 28.82 26.72 28.68 28.87 25.46 35.6 39.28 45.98 46.53 43.77 23.27 62.55 61.92 24.32 33.0 31.45 26.34 24.38 194.52
KNA59657 (VCV51_031358)
 39.01 54.26 20.31 28.04 71.6 65.5 63.14 71.21 55.74 40.33 40.92 46.22 34.62 57.12 34.4 71.74 50.13 14.83 17.2 46.22 49.16 50.47 93.69
KNA59670 (VCV51_031352)
 663.47 402.88 208.17 664.87 2073.64 1849.63 2038.44 1835.52 486.31 1564.79 976.47 1023.77 993.26 299.13 429.42 1763.7 1779.64 1128.62 1310.37 427.21 305.28 464.02 5106.93
KNA59851 (VCV51_032262)
 5.93 12.86 0.91 4.58 11.75 12.48 16.38 12.81 11.4 3.47 17.77 22.64 3.89 12.7 3.57 4.31 5.34 4.17 5.98 8.88 9.69 8.66 70.15
KNA60529 (VCV51_032200)
 61.6 26.63 58.84 51.15 23.16 32.06 29.04 14.29 48.82 175.66 90.02 129.45 108.02 21.45 9.1 57.18 90.66 67.77 109.94 46.61 28.67 56.11 263.31
KNA60530 (VCV51_032201)
 25.54 7.84 8.53 22.52 19.4 22.0 22.9 9.08 12.72 72.77 123.28 33.36 80.9 5.89 4.93 15.97 23.08 126.72 176.21 10.67 9.73 14.14 380.46
KNA60531 (VCV51_032202)
 32.72 11.06 8.71 23.22 41.44 48.58 44.64 19.57 16.17 101.64 91.67 55.93 123.23 7.66 9.43 18.22 24.7 195.55 313.91 11.52 9.75 15.11 797.47
KNA60730 (VCV51_032169)
 127.79 594.64 126.2 106.71 25.09 27.63 27.19 24.78 108.8 395.58 662.38 520.99 203.27 355.88 622.34 69.8 75.03 86.47 162.51 126.77 126.1 130.34 241.25

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)