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Heatmap: Cluster_48 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
H37Rv,WT
H37Rv,T4 20 µM, 12h
HS,Ps1_STM_6_A
N0155,WT,7H9
Lab,Tn6:Rv3869
HS,Cr2_00-R1301
Lab,Mp12_209
H37Rv
HS,Ps1_EMB_6_A
CDC1551,WT
N0155,rpoB Ser450Leu,7H9
HS,Cr3_01-R1422
H37Rv,T10 20 µM, 48h
HS,Ps5_OFXS-1
Lab,Cr7_auxRIF-R2
Lab,Cr8_MC26020
HS,Ps2_EMB_6_B
HS,Ps1_STM_6_B
Lab,Mp8_Rv1049
Lab,Mp3_Rv2989
H37Rv,T4 20 µM, 24h
Lab,Mp9_Rv1963c
HS,Ps1_0_A
H37Rv,DMSO 0.4%, 0h
Lab,Tn9:Rv3214
Lab,Tn7:Rv2196
H37Rv,T4 20 µM, 48h
Lab,Mp4_Rv3334
HS,Ps1_CIP_6_A
HS,Ps2_EMB_6_A
HS,Ps1_ND_3_A
H37Rv,WT,Reaeration
Lab,Tn8:Rv1304
HS,Ps3_CIP_6_A
H37Rv,WT,0% DO
Lab,Tn5:Rv3083c
Lab,Mp2_Rv1152
HSTB
HS,Cr1_01-R0348
Lab,Cr6_auxRIF-R1
H37Rv,Log
HS,Cr4_98-01436
HS,Ps1_INH_3_B
Lab
HS,Ps3_CIP_6_B
HS,Ps3_STM_3_A
Lab,Tn4:Rv3323c
HS,Ps4_HN878
Lab,Tn3:Rv1819c
Lab,H37Rv
HS,Ps3_ND_3_B
HS,H37Rv,WT
HS,Cr5_OFXR-17
HS
Lab,Tn12_Tn209_ref
H37Rv,T10 20 µM, 24h
Lab,Tn10:Rv0758
H37Rv,pH 7.0
HS,Ps3_EMB_3_B
H37Rv,mycP1-eccE1 KO
CCP43543 (Rv0795)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP44129 (Rv1370c)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP44523 (Rv1757c)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP44529 (Rv1763)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP44880 (Rv2105)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP44945 (Rv2168c)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP45060 (Rv2278)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP45142 (Rv2354)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP45274 (Rv2480c)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP45446 (Rv2648)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP45615 (Rv2815c)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP45995 (Rv3184)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP45997 (Rv3186)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP46146 (Rv3325)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP46202 (Rv3381c)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69
CCP46296 (Rv3474)
 73.54 13.79 71.82 11.54 25.68 47.5 36.16 21.6 48.84 4.05 11.86 11.98 13.59 37.02 28.39 38.18 25.69 71.29 25.04 21.87 12.17 43.1 48.5 11.85 38.88 21.55 12.68 51.3 49.01 21.91 61.56 14.5 20.55 13.53 94.51 29.92 25.34 28.27 67.2 24.91 20.18 106.25 46.46 32.26 14.55 13.93 34.97 54.88 34.33 32.8 16.04 10.4 46.17 29.52 38.42 13.63 25.74 21.65 12.3 12.69

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)