Heatmap: Cluster_23 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14098 (WX61_00009)
0.67 -0.07 -0.47 1.22 -0.21 -1.35 1.26 0.26 1.52 -3.5 -3.13 1.05 0.55 -0.37 -1.08 -1.24 -1.54 -3.52 -1.31 -1.19
AKP14189 (frmA_2)
-0.26 -0.4 -0.56 0.62 -0.6 -1.25 0.47 0.04 0.76 -2.63 -1.71 0.77 0.99 -0.82 -0.09 -1.45 -0.99 -1.11 -1.02 1.81
AKP14190 (WX61_00101)
0.01 -0.23 -0.07 0.92 -0.26 -1.24 0.74 0.09 0.82 -1.94 -1.8 0.81 0.69 -0.4 -0.15 -1.48 -0.94 -1.63 -0.78 1.12
AKP14251 (WX61_00162)
0.83 -1.97 -2.18 1.26 0.93 -1.55 1.48 -2.07 1.25 -2.77 -4.71 1.55 1.01 -1.84 -0.17 -1.81 -1.24 -4.75 -2.35 -1.17
AKP14356 (alsT_1)
0.38 -0.19 -1.78 1.25 -0.2 -1.07 1.56 0.15 1.29 -3.95 -2.75 0.78 0.57 -0.89 -0.56 -1.23 -0.86 -2.84 -2.57 0.48
AKP14376 (WX61_00292)
1.47 -0.17 -0.46 1.0 0.18 -1.53 0.89 0.3 1.07 -2.01 -1.3 1.28 -0.55 -0.16 -1.74 -1.51 -1.56 -0.97 -1.17 -1.58
AKP14377 (WX61_00293)
1.09 0.4 -1.76 1.15 0.38 -2.6 1.28 0.19 1.38 -3.69 -2.78 1.43 0.66 -0.41 -1.94 -2.46 -2.85 -2.38 -2.36 -2.6
AKP14445 (WX61_00363)
0.12 -0.08 -1.7 1.08 -0.02 -1.03 1.05 -0.03 1.23 -2.31 -1.5 1.21 0.66 -0.43 -1.32 -1.14 -0.88 -0.9 -1.92 0.35
AKP14473 (WX61_00391)
-0.32 -1.01 -2.14 1.06 -0.4 -0.62 0.78 -0.68 1.46 -3.04 -0.42 1.29 0.93 -0.44 0.27 -0.76 -0.42 -0.9 -2.9 -0.44
AKP14482 (lrp_2)
1.19 -0.29 -1.74 0.97 -0.18 -1.96 1.12 0.16 1.07 -1.25 -0.1 1.37 0.2 -0.31 -2.53 -2.13 -1.74 -0.28 -2.06 -1.1
AKP14536 (WX61_00454)
-0.96 -0.4 -2.68 1.37 -0.47 -0.73 1.21 -0.67 1.69 -3.39 -2.17 1.9 -0.25 -0.67 -1.02 -1.02 -0.39 -1.82 -2.83 -0.33
AKP14537 (pntB)
-1.34 -0.28 -2.04 1.1 -0.24 -0.6 1.01 -0.47 1.58 -3.03 -1.44 1.82 -0.65 -1.24 -1.74 -0.69 -0.47 -0.9 -2.21 0.76
AKP14541 (WX61_00460)
0.51 -0.13 0.38 0.81 0.28 -1.17 0.71 0.11 0.81 -1.03 -2.01 0.96 0.68 -0.55 -0.57 -1.12 -1.25 -2.16 -0.23 -0.18
AKP14619 (dsbA_1)
0.45 -0.05 -0.09 0.66 0.04 -1.02 0.54 -0.08 0.5 -1.02 -2.99 0.67 0.83 -0.01 0.08 -0.89 -1.23 -2.8 -0.42 0.94
AKP14623 (putP)
-0.26 -0.18 -2.04 0.78 0.3 -1.32 0.2 -0.15 0.54 -2.44 -2.73 1.44 1.32 -0.33 -1.01 -1.54 -1.04 -2.65 -1.2 1.56
AKP14629 (ygaV)
0.61 -0.46 -3.83 1.2 0.87 -1.39 1.45 0.17 1.5 -5.85 -1.55 1.64 -0.31 -1.63 -3.85 -1.19 -1.77 -1.82 -5.87 -0.36
AKP14685 (WX61_00607)
0.63 -0.41 -1.75 1.32 0.72 -1.0 1.15 -0.55 1.01 -3.02 -2.56 1.45 0.96 -0.83 -1.62 -1.4 -0.55 -2.01 -2.06 -1.18
AKP14758 (truC)
1.18 -1.05 -1.39 1.31 0.15 -1.86 1.57 -0.38 1.08 -2.95 -2.39 1.02 1.15 -1.41 -2.4 -2.13 -1.55 -1.94 -1.8 -0.17
AKP14759 (yigL)
0.6 -0.46 -0.35 1.31 0.65 -2.45 1.51 0.0 1.22 -1.85 -1.92 1.03 0.66 -1.41 -1.63 -2.34 -2.64 -1.71 -0.96 -0.95
AKP14787 (WX61_00714)
0.27 -0.43 -2.78 0.82 0.6 -1.1 1.04 -0.3 1.37 -3.71 -2.1 1.14 1.09 0.08 -0.39 -0.85 -1.59 -1.51 -3.29 -0.15
AKP14862 (WX61_00795)
0.62 -0.28 -0.54 1.12 -0.1 -1.09 0.87 -0.04 0.89 -1.32 -2.31 0.97 0.89 -0.61 0.23 -0.94 -1.33 -1.94 -0.69 -0.51
AKP14867 (trmL)
0.72 -2.61 -4.48 1.21 -1.41 -3.17 1.62 -2.25 2.51 -7.19 -4.51 2.29 -0.37 -2.45 -3.29 -3.15 -3.2 -4.6 -6.33 -3.18
AKP15101 (WX61_01043)
1.51 0.2 -2.86 1.44 0.71 -2.26 1.27 0.52 0.96 -5.27 -3.22 1.42 -1.62 -0.49 -0.96 -2.36 -2.13 -2.56 -3.89 -1.05
AKP15116 (WX61_01062)
-1.41 -0.89 -4.19 1.8 -0.47 -2.76 1.88 0.31 1.94 -2.43 -2.75 1.74 0.24 -2.46 -2.71 -3.65 -2.01 -2.83 -3.73 -2.3
AKP15353 (xerC)
-0.06 -0.67 -2.61 1.25 -0.01 -0.22 1.07 -0.53 1.07 -3.41 -1.13 1.47 0.94 -0.96 -0.39 -0.33 -0.06 -0.96 -3.01 -2.21
AKP15443 (hepA)
0.37 -0.57 -0.2 0.61 -0.17 -0.39 0.63 -0.39 0.61 -0.27 -2.49 0.69 0.64 -0.49 -0.42 -0.43 -0.34 -2.84 -0.57 1.11
AKP15455 (yqaA)
-0.35 -1.92 -2.08 1.28 -0.82 -1.6 1.46 -1.74 1.67 -3.7 -0.92 2.36 0.46 -1.69 -1.63 -1.78 -1.35 -0.88 -2.74 -4.3
AKP15486 (WX61_01440)
-0.67 -0.15 -2.5 0.73 -1.21 -2.2 1.59 0.2 2.1 -3.45 -3.91 2.03 0.52 -1.96 -2.15 -1.98 -2.59 -4.47 -2.87 -0.35
AKP15488 (cpxA)
1.04 -0.25 -2.03 1.01 0.27 -2.27 1.19 -0.12 1.47 -4.7 -0.66 0.98 0.56 -1.03 -2.75 -2.24 -2.31 -0.54 0.43 -2.08
AKP15532 (lptG)
0.69 0.08 -2.29 0.8 0.69 -0.79 1.01 0.41 0.91 -2.84 -1.8 0.95 0.86 -0.55 -0.1 -0.78 -0.79 -1.75 -2.77 -0.77
AKP15838 (WX61_01808)
0.83 -1.16 -3.48 1.87 0.78 -1.82 0.66 -1.42 0.51 -4.72 -3.83 1.76 1.69 -1.09 -2.35 -2.1 -1.49 -3.25 -4.89 -0.86
AKP15880 (WX61_01850)
1.07 -0.46 -0.44 1.35 -0.03 -0.94 1.16 -0.43 1.19 -2.41 -1.34 -0.07 0.62 -0.31 -0.23 -1.11 -0.72 -0.69 -1.02 -2.3
AKP15991 (dsbD)
1.17 -0.0 -1.4 0.57 1.11 -0.81 1.14 0.25 1.1 -4.99 -1.8 0.74 0.02 -0.41 -0.12 -0.72 -0.96 -1.05 -4.1 -1.77
AKP16050 (WX61_02023)
0.51 -0.22 -1.11 1.07 0.47 -0.56 0.9 0.0 1.05 -2.77 -2.11 1.26 0.38 -0.88 -0.19 -0.38 -0.88 -2.34 -1.17 -0.55
AKP16052 (WX61_02025)
-0.36 -1.05 - 1.22 -0.43 -2.2 1.01 -0.72 2.06 - -1.5 2.11 0.34 -1.48 -1.11 -2.14 -2.28 -1.1 - 0.02
AKP16053 (WX61_02026)
-0.34 -0.16 -5.3 1.05 0.33 -1.14 0.69 0.14 1.82 -7.8 -4.51 1.81 0.85 -0.85 -0.76 -0.94 -1.52 -4.04 -6.52 -0.3
AKP16065 (porA_2)
0.06 -0.08 -1.3 1.13 0.22 -2.1 1.19 0.5 1.58 -2.64 -1.84 1.44 0.9 -1.28 -1.33 -1.91 -2.43 -2.26 -1.74 -0.89
AKP16068 (dusC_2)
0.7 -0.09 -1.93 0.92 -0.25 -1.12 0.88 -0.35 1.57 -2.37 -0.19 1.48 0.14 -0.75 -0.86 -1.01 -1.3 -0.43 -2.9 -1.04
AKP16077 (WX61_02050)
-0.36 -1.05 - 1.22 -0.43 -2.2 1.01 -0.72 2.06 - -1.5 2.11 0.34 -1.48 -1.11 -2.14 -2.28 -1.1 - 0.02
AKP16078 (WX61_02051)
-0.34 -0.16 -5.3 1.05 0.33 -1.14 0.69 0.14 1.82 -7.8 -4.51 1.81 0.85 -0.85 -0.76 -0.94 -1.52 -4.04 -6.52 -0.3
AKP16094 (ggt_1)
0.7 -0.6 0.03 0.82 0.45 -1.33 0.89 -0.5 1.08 -2.12 -3.71 0.63 0.94 -0.66 -0.49 -1.4 -1.24 -3.5 -0.63 0.88
AKP16194 (purE)
0.49 -0.16 -2.2 1.18 0.29 -1.04 0.86 -0.05 0.95 -3.67 -0.18 1.25 0.84 -0.06 -1.01 -1.1 -0.97 -0.27 -2.88 -1.82
AKP16236 (WX61_02212)
0.38 -0.62 -1.06 1.36 0.0 -1.8 1.16 0.06 1.39 -2.32 -2.03 1.12 1.22 -1.07 -0.61 -1.86 -1.71 -2.47 -1.6 -0.68
AKP16238 (WX61_02214)
-0.46 -0.45 -1.15 1.55 -0.69 -2.62 1.14 0.39 1.74 -2.43 -4.15 1.83 1.03 -0.96 -1.92 -2.28 -3.36 -3.98 -2.43 -1.58

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.