Heatmap: Cluster_14 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14091 (WX61_00002)
1.23 -1.26 0.48 0.72 0.41 -0.87 0.38 -0.94 0.14 -0.57 0.11 -0.01 0.47 -1.72 -0.28 -0.73 -1.1 0.04 -0.26 0.28
AKP14096 (tfdR)
-0.31 -0.51 -0.29 0.23 -0.2 -1.06 -0.04 -0.33 0.01 -1.75 0.4 -0.48 1.58 0.46 -1.0 -1.17 -0.9 1.18 -1.04 0.52
AKP14137 (nadE)
-1.03 0.08 0.0 -0.12 -1.67 0.06 -0.4 -0.72 -0.44 -0.24 1.1 -0.55 -0.86 0.78 -0.35 0.02 0.12 1.16 -0.34 0.29
AKP14215 (cah)
-0.92 0.69 -2.76 0.09 -0.71 -1.24 -0.19 -0.16 -0.2 -2.78 1.3 -0.53 0.68 1.47 -1.82 -1.42 -1.0 1.71 -3.29 -0.38
AKP14248 (zur)
-0.34 -0.52 0.52 0.54 -0.58 -0.39 0.25 -0.66 0.44 0.1 0.33 0.3 0.09 -0.77 0.52 -0.39 -0.39 0.24 0.12 -0.81
AKP14333 (WX61_00245)
- 1.07 - - 1.05 -2.41 - 1.07 - - 1.03 - - 1.89 2.18 -2.42 -2.4 0.94 - -0.01
AKP14342 (aniA)
-2.64 -1.06 -1.2 -1.7 0.75 -0.46 -2.42 -1.71 -1.96 -3.82 2.32 -2.29 -0.89 1.79 1.34 -0.92 0.03 -0.93 -1.69 0.34
AKP14381 (WX61_00297)
-0.08 -0.15 -0.13 0.2 -0.19 -0.5 -0.22 -0.76 -0.31 -0.52 -0.22 0.42 -1.86 1.46 0.27 -0.58 -0.38 0.97 -1.95 0.55
AKP14391 (WX61_00307)
-0.51 -1.0 -0.26 -0.85 0.28 -0.62 -1.96 -1.14 -1.96 0.1 0.71 -0.93 1.0 0.31 1.27 -0.76 -0.43 0.01 0.01 1.23
AKP14435 (ccoP2)
-1.45 -0.7 -0.94 -0.92 -0.42 0.14 -1.52 -1.0 -1.76 0.5 1.26 -1.29 -0.26 0.39 0.66 -0.13 0.47 0.79 -0.74 1.27
AKP14496 (WX61_00414)
0.63 -1.4 -1.73 0.63 0.13 -0.2 0.58 -1.41 0.83 0.21 -0.96 0.99 -0.5 0.59 -0.46 -0.37 0.03 0.53 -2.12 -0.86
AKP14516 (adhA)
0.55 -0.84 -1.03 1.07 -14.55 -1.68 0.52 -1.18 0.54 -1.53 0.72 0.81 - 1.32 -0.74 -1.98 -1.32 1.66 -1.14 -0.64
AKP14532 (purH)
-0.01 0.15 0.39 -0.12 -0.07 -0.99 0.08 -0.63 -0.13 -1.98 1.19 -0.55 0.58 0.84 -1.24 -1.26 -0.67 1.2 -0.11 -1.34
AKP14552 (ynhG)
0.37 0.03 -0.44 0.43 0.39 -1.45 0.54 -0.04 0.55 -0.64 0.53 0.39 0.88 -0.41 -1.25 -1.38 -1.56 0.62 -1.01 -0.24
AKP14561 (potF_1)
-1.06 0.11 -1.53 -1.73 -1.3 0.37 -2.09 -1.1 -2.15 0.1 1.7 -1.88 -0.55 0.64 0.14 0.3 0.48 1.19 -1.01 0.86
AKP14563 (tbp1)
-1.33 1.42 -2.05 -0.59 -1.33 -0.76 -1.01 -0.51 -0.53 -1.65 0.43 -0.87 -0.15 1.72 -0.47 -0.77 -0.75 1.8 -2.26 0.18
AKP14647 (rmpM)
-0.36 -0.45 -0.78 0.37 0.01 -0.56 0.32 -0.73 0.33 -1.2 0.55 0.1 1.03 0.1 -0.51 -0.71 -0.37 0.61 -0.85 0.65
AKP14652 (anmK)
-0.78 -0.86 0.21 0.15 -1.06 -0.26 -0.34 -0.92 -0.21 -0.04 0.48 0.04 0.75 -0.04 0.47 -0.47 0.01 0.43 0.6 0.12
AKP14744 (WX61_00667)
- 1.07 - - 1.05 -2.41 - 1.07 - - 1.03 - - 1.89 2.18 -2.42 -2.4 0.94 - -0.01
AKP14829 (WX61_00757)
-0.51 -0.11 1.05 -0.51 -1.38 -0.8 -0.52 0.07 -0.76 0.64 -0.28 0.07 -2.13 1.03 -0.34 -1.03 -0.51 0.45 0.68 0.72
AKP14881 (nuoK)
-0.69 -0.99 -4.86 -0.38 1.04 -0.58 -0.5 -0.32 -0.99 -1.92 1.84 -0.75 -0.7 -0.74 0.99 -0.88 -0.22 1.66 -5.66 0.17
AKP14909 (WX61_00842)
-0.11 -0.1 -1.4 0.15 0.39 -0.33 -0.07 -0.75 -0.45 -0.9 1.36 -0.45 1.25 -0.06 -2.8 -0.34 -0.31 1.41 -1.55 -1.48
AKP14936 (petB)
-0.56 -0.75 -0.58 -0.46 -0.39 0.37 -1.16 -0.8 -1.28 0.02 0.63 -0.57 0.63 -0.04 0.75 0.16 0.63 0.38 -0.5 0.78
AKP14937 (petA)
-0.37 -1.13 -0.44 -0.68 -0.01 0.14 -1.29 -1.29 -1.41 -0.34 1.09 -0.86 0.97 0.09 0.32 -0.04 0.37 1.09 -0.39 0.31
AKP15004 (WX61_00941)
-0.59 0.11 -0.4 0.1 -1.13 0.19 -0.04 -0.01 -0.25 -2.57 0.93 -0.48 0.0 0.76 0.26 0.23 0.13 0.93 -0.87 -0.69
AKP15100 (piiC_7)
1.17 -12.13 0.95 1.69 0.53 -4.37 0.82 -11.53 0.81 -2.1 1.41 0.82 -1.93 -12.32 -6.19 -4.63 -4.06 1.11 -1.57 -5.2
AKP15186 (fur)
-0.18 -0.0 0.53 0.29 -0.56 -0.59 0.1 -0.88 0.0 -0.17 -0.21 0.28 -0.0 -0.05 0.3 -0.55 -0.66 0.89 0.08 0.14
AKP15243 (WX61_01194)
-0.67 0.24 -0.99 0.11 0.14 0.03 -0.2 -0.23 -0.24 -2.46 1.19 -0.16 1.0 0.17 -1.08 0.11 -0.1 0.62 -1.11 -0.07
AKP15269 (resA_2)
0.7 0.07 -1.51 0.51 0.65 -1.67 0.94 0.11 0.51 -1.49 0.48 0.57 0.93 0.23 -1.41 -1.75 -1.54 0.31 -1.76 -1.36
AKP15277 (WX61_01228)
-0.23 -0.08 -1.63 0.42 -0.34 -0.77 -0.15 -0.74 -0.42 -1.72 1.45 0.11 0.98 0.33 -0.3 -0.99 -0.5 0.87 -1.92 0.55
AKP15282 (metQ)
-0.32 0.15 -1.1 0.11 -0.03 -0.26 -0.13 -0.36 -0.41 -0.08 0.68 -0.34 0.48 0.74 -1.14 -0.39 -0.09 0.98 -0.9 0.29
AKP15343 (pchR)
-0.46 0.36 -3.94 0.57 -0.29 -1.27 0.28 0.14 0.19 -2.52 -1.6 -0.12 -0.16 0.46 -0.32 -1.6 -0.88 2.63 -3.18 -4.25
AKP15347 (pyrE)
0.36 -0.71 -2.65 0.31 1.02 -0.71 0.2 -1.0 -0.03 -2.92 1.29 0.2 0.52 -0.09 -0.74 -0.78 -0.61 1.58 -3.0 -1.4
AKP15405 (WX61_01358)
0.52 -0.32 -2.11 0.37 0.8 -0.4 0.41 -0.58 0.06 -2.46 1.05 0.2 0.23 -0.54 -0.25 -0.49 -0.29 1.28 -2.14 -1.26
AKP15441 (WX61_01394)
-1.48 1.05 -1.75 -0.67 -2.62 -1.91 -1.25 0.61 -0.88 -3.29 -0.6 -0.75 -1.53 1.82 -0.7 -1.39 -3.4 -0.44 -2.43 2.69
AKP15587 (fbpC)
0.57 0.21 -4.64 0.4 0.68 -1.36 0.76 -0.69 0.59 -2.98 1.46 0.31 -0.13 -0.34 -1.52 -1.49 -1.19 1.61 -5.26 -2.75
AKP15589 (fbpA)
-0.37 1.12 -3.06 0.13 -0.67 -1.7 0.08 -0.4 0.12 -2.39 1.15 -0.35 -1.28 0.3 -1.42 -1.82 -1.52 2.57 -3.84 -2.63
AKP15614 (maeB)
0.52 0.67 -1.06 0.04 -0.18 -0.99 -0.3 0.41 -0.53 -0.56 0.01 -0.54 0.51 1.18 -0.92 -1.08 -0.85 0.0 -1.04 1.09
AKP15709 (purC)
-0.14 -0.28 0.34 -0.22 0.03 -0.46 -0.64 -0.45 -0.78 -0.91 0.36 -0.72 -0.16 0.51 0.67 -0.55 -0.33 0.6 0.11 1.03
AKP15762 (metC)
-0.39 -0.36 0.87 -0.17 -0.62 -0.09 -0.42 -0.57 -0.53 -0.21 0.4 -0.57 0.35 0.08 0.65 -0.09 -0.09 0.5 0.28 -0.38
AKP15827 (WX61_01795)
0.16 0.27 0.17 -1.47 0.57 -0.82 -0.73 0.35 -0.73 0.14 -0.08 -0.99 0.06 0.78 -0.09 -0.88 -0.73 -0.18 0.16 1.18
AKP15828 (WX61_01796)
-0.58 -0.51 -1.0 0.19 0.42 -0.02 -1.28 -0.42 -1.27 -0.47 0.41 0.0 -0.1 0.13 0.73 0.04 -0.11 0.66 -0.91 1.19
AKP15849 (WX61_01819)
0.53 -0.77 -0.72 0.57 0.48 - 0.6 -0.75 0.51 -1.09 0.72 0.26 1.62 0.26 - - - 1.09 -1.08 -0.36
AKP15850 (WX61_01820)
0.42 -0.49 -0.31 0.27 0.42 - 0.04 -0.74 -0.12 -0.84 1.15 -0.38 1.33 0.63 - - - 1.36 -0.8 0.38
AKP15851 (WX61_01821)
0.92 -1.4 0.78 0.7 0.61 - 0.74 -1.43 0.66 0.16 0.39 0.4 0.66 -1.08 - - - 0.35 0.53 -0.49
AKP15885 (WX61_01855)
0.71 -0.43 -1.09 0.55 0.68 -1.5 0.74 -0.38 0.36 -0.56 1.26 0.24 0.52 -0.92 -1.35 -1.4 -1.68 0.72 -1.17 -0.68
AKP15892 (WX61_01862)
0.0 -0.18 -0.49 -0.14 0.25 0.2 -0.42 -0.31 -0.12 -0.34 -0.06 -0.96 0.67 -0.09 -0.11 0.2 0.2 0.33 -0.73 0.86
AKP15907 (mafA1_4)
1.28 -0.5 -8.85 -1.26 1.38 -1.84 0.95 -0.63 0.75 -8.55 1.66 -2.02 -7.34 0.24 -1.07 -2.09 -1.53 1.87 -8.88 -7.07
AKP15920 (WX61_01890)
-0.29 -0.55 -1.29 1.1 -1.03 0.24 0.65 -0.95 0.43 -1.95 -0.19 0.56 -0.93 0.92 -0.53 -0.39 0.85 0.5 -1.51 -0.36
AKP15941 (fumC)
-0.26 0.86 -2.33 -0.51 -0.27 -0.68 -0.57 -0.27 -0.65 -3.23 -0.03 -1.55 0.02 1.31 -0.76 -0.98 -0.32 2.5 -2.71 -2.05
AKP16020 (rlmB_1)
-0.05 -0.42 0.17 -0.34 0.99 -0.76 -0.31 -0.4 -0.5 -0.7 1.43 -0.55 0.85 -0.34 -0.81 -0.81 -0.69 1.22 -0.54 -2.73
AKP16042 (WX61_02015)
-0.76 1.46 -2.88 -0.27 -0.83 -0.98 -0.51 0.83 -0.43 -3.21 -2.34 -0.75 -1.51 1.85 2.16 -1.1 -0.82 -1.96 -3.28 -0.59
AKP16070 (WX61_02043)
-0.4 -0.3 0.61 -0.41 -11.39 -0.48 -1.0 -0.06 -1.05 0.37 -0.61 -0.89 -0.99 1.1 0.38 -0.83 -0.06 -0.11 0.72 1.57
AKP16115 (hda)
0.55 -0.31 -1.96 0.41 0.54 -1.05 0.21 -0.39 -0.05 -2.95 1.35 0.08 0.95 -0.38 -1.01 -1.14 -0.92 1.38 -2.47 -0.7
AKP16160 (WX61_02136)
-0.1 0.01 -1.23 0.31 -0.66 0.34 0.14 0.02 0.14 -2.31 0.14 0.17 -0.22 0.56 0.48 0.11 0.64 0.48 -1.54 -0.44

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.