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Heatmap: Cluster_18 (HCCA)

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(Showing raw values)

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Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14118 (WX61_00029)
 123.36 229.96 6.71 297.79 96.32 185.68 144.26 214.02 187.53 1.67 105.9 213.72 211.82 227.86 92.88 186.38 184.62 200.25 6.39 51.06
AKP14135 (yhjX)
 59.41 163.28 10.69 44.73 62.93 103.13 48.51 114.78 43.53 11.45 85.24 41.76 61.58 216.54 97.17 102.48 104.12 71.86 6.87 119.28
AKP14136 (xseA)
 41.53 87.85 25.36 53.19 57.22 91.11 40.85 76.46 46.89 12.91 46.93 42.32 98.97 82.92 90.69 76.95 112.34 28.88 14.32 88.42
AKP14139 (trxA)
 569.43 2534.3 353.65 928.36 337.24 315.22 857.23 1617.8 1048.98 691.27 1222.88 776.51 296.74 2214.88 454.63 328.71 294.99 3217.37 250.8 678.92
AKP14263 (WX61_00174)
 53.19 204.47 13.28 210.08 142.48 33.38 67.15 133.38 86.52 4.14 55.88 179.74 250.41 174.85 51.05 33.4 33.35 70.66 8.0 23.59
AKP14264 (purM)
 310.81 440.99 218.15 222.74 275.29 279.98 198.04 397.17 207.6 109.34 216.11 189.42 416.03 528.57 449.32 269.7 295.38 230.18 183.95 225.71
AKP14273 (pemK)
 587.38 1200.0 245.01 1216.92 735.01 537.21 905.68 1109.7 763.91 75.3 1015.52 869.89 1428.96 1467.73 403.0 432.0 695.01 1177.21 183.22 567.87
AKP14302 (WX61_00213)
 4.26 14.14 0.41 3.56 2.41 14.24 3.72 7.9 3.28 0.22 4.9 3.15 8.29 10.86 13.22 9.32 21.64 7.14 0.35 5.42
AKP14308 (prtR_1)
 31.46 60.93 11.14 139.48 9.72 260.7 22.57 90.78 25.64 1.95 3.83 114.56 194.26 91.14 245.48 237.79 295.06 7.53 7.59 96.64
AKP14343 (pkn1)
 54.14 105.56 84.56 71.02 60.52 64.25 44.43 97.62 62.24 11.8 84.97 51.39 93.52 170.15 124.15 58.34 73.12 46.54 65.66 77.44
AKP14579 (WX61_00498)
 0.0 98.61 0.0 0.0 0.0 146.64 0.0 80.6 0.0 0.0 0.0 0.0 0.0 83.45 0.0 144.4 150.0 0.0 0.0 174.54
AKP14635 (pgmB)
 6.92 40.4 15.76 25.98 13.41 14.83 21.84 23.65 16.62 8.62 9.98 20.66 42.38 35.45 25.18 13.19 17.31 11.69 11.53 3.38
AKP14708 (WX61_00630)
 4.26 14.14 0.41 3.56 2.41 14.24 3.72 7.9 3.28 0.22 4.9 3.15 8.29 10.86 13.22 9.32 21.64 7.14 0.35 5.42
AKP14767 (hslO)
 78.98 48.1 16.74 34.07 62.77 176.02 40.18 78.26 42.59 51.53 22.97 45.7 148.82 170.3 170.48 158.37 202.48 56.4 14.27 10.21
AKP14769 (WX61_00696)
 132.19 458.65 96.91 170.48 113.24 428.81 155.28 422.53 211.51 25.83 130.05 136.03 240.25 363.23 468.05 370.31 516.56 147.01 44.59 73.58
AKP14833 (WX61_00762)
 34.56 125.14 53.78 55.86 48.62 34.57 42.4 98.55 63.55 27.86 61.3 56.06 107.58 83.65 19.39 36.46 31.74 76.06 68.98 131.13
AKP14871 (WX61_00804)
 0.0 14.38 0.0 0.0 0.0 20.25 0.0 4.07 0.0 0.0 0.0 0.0 0.0 0.47 0.0 26.14 11.42 0.0 0.0 0.0
AKP14899 (lpxC)
 207.02 349.86 47.09 394.69 152.88 100.93 303.88 278.33 383.66 15.0 294.39 393.66 508.67 310.18 215.25 99.17 103.56 833.6 20.9 319.41
AKP14929 (ptsH)
 112.21 320.99 51.35 133.46 129.61 353.89 90.47 246.32 91.6 35.3 180.1 85.06 238.75 320.71 244.95 315.15 412.0 151.16 35.55 136.17
AKP14931 (hpt)
 108.87 140.46 84.14 118.25 71.48 343.5 73.53 139.36 72.91 69.68 19.71 86.66 111.07 258.01 244.5 348.05 336.67 23.82 80.22 114.69
AKP14964 (folD)
 191.35 215.11 47.07 145.74 158.87 221.77 134.81 186.06 129.07 42.84 118.28 143.28 173.78 336.82 230.5 215.87 230.62 147.7 48.08 199.97
AKP15044 (murA)
 224.56 404.32 107.3 168.71 305.65 729.17 134.51 422.8 120.45 89.24 86.03 132.05 539.4 553.32 587.29 653.27 843.01 83.69 107.74 364.95
AKP15059 (WX61_01001)
 0.0 214.52 11.54 0.0 0.0 0.0 1.77 121.59 0.0 9.02 12.68 0.0 280.5 237.29 0.0 0.0 0.0 12.77 6.98 0.0
AKP15083 (WX61_01025)
 532.07 879.98 485.27 403.57 76.99 136.81 362.02 571.99 439.16 192.01 15.19 410.99 1064.26 1103.61 113.14 103.81 186.51 18.27 422.08 62.0
AKP15084 (WX61_01026)
 433.84 466.01 219.85 573.65 202.16 127.4 461.61 520.74 425.99 103.21 726.77 535.91 687.81 415.47 424.11 116.38 143.94 885.72 234.55 125.66
AKP15176 (soj)
 113.4 177.26 116.32 123.42 108.36 268.81 96.69 126.21 77.7 67.18 55.53 84.16 232.87 242.04 234.96 244.1 305.87 58.63 106.9 158.44
AKP15270 (WX61_01221)
 0.0 64.31 0.0 0.0 0.0 0.0 0.0 9.43 0.0 0.0 0.0 0.0 0.0 117.31 0.0 0.0 0.0 0.0 0.0 0.0
AKP15333 (WX61_01284)
 269.32 626.04 434.36 376.61 559.44 742.93 320.18 601.95 328.66 188.46 233.67 298.73 379.81 911.15 974.66 601.21 955.5 338.12 283.7 468.42
AKP15337 (msrC)
 106.51 206.98 42.62 82.62 94.94 348.21 80.4 137.39 60.86 32.13 16.32 66.19 86.3 285.26 268.92 306.05 411.44 23.52 38.5 135.58
AKP15339 (moeZ)
 13.72 144.38 10.1 30.31 10.12 217.3 10.46 117.14 10.51 10.77 47.96 14.73 42.98 229.5 214.95 212.76 224.12 41.56 5.4 61.32
AKP15377 (fhs)
 216.49 320.11 51.28 188.25 210.87 316.81 180.78 276.48 158.5 29.39 182.07 139.52 550.4 416.4 157.33 265.18 394.25 238.2 41.75 301.39
AKP15540 (WX61_01500)
 131.32 251.91 54.24 193.28 184.58 200.03 176.12 323.62 194.03 38.91 236.17 199.54 329.57 297.63 205.77 188.93 216.66 369.5 40.56 69.51
AKP15584 (hisA)
 116.96 218.23 33.07 222.94 70.4 242.49 191.53 145.58 184.76 19.72 93.94 141.48 220.24 212.24 113.67 222.02 273.18 110.75 29.35 196.17
AKP15638 (purF)
 257.32 307.74 168.35 145.61 200.76 304.82 148.22 300.73 135.96 45.79 213.0 116.29 360.03 309.32 430.65 279.08 343.43 234.37 98.94 513.39
AKP15722 (dnaX_1)
 418.5 496.77 334.91 312.27 359.94 450.61 253.46 445.91 196.21 188.48 270.24 200.28 304.49 611.95 556.59 452.19 448.23 369.79 295.42 339.08
AKP15764 (WX61_01729)
 488.69 445.55 124.54 320.95 250.26 234.83 331.66 355.06 302.57 97.14 140.14 277.7 333.12 505.65 479.42 264.79 189.88 206.58 77.39 244.34
AKP15826 (WX61_01794)
 269.53 325.24 136.23 145.55 297.64 633.06 126.82 410.75 116.41 84.58 40.09 31.23 189.46 423.58 536.97 536.94 777.24 40.5 109.17 400.51
AKP15859 (WX61_01829)
 4.26 14.14 0.41 3.56 2.41 14.24 3.72 7.9 3.28 0.22 4.9 3.15 8.29 10.86 13.22 9.32 21.64 7.14 0.35 5.42
AKP16013 (WX61_01986)
 89.89 159.14 48.46 87.07 83.68 63.55 93.78 107.4 103.07 40.27 190.33 61.18 83.76 102.5 71.78 59.87 69.07 206.48 35.84 92.58
AKP16034 (metF)
 133.79 547.91 93.32 162.96 191.79 357.21 158.46 392.56 160.99 153.82 885.27 153.9 342.54 272.35 132.31 336.52 388.34 485.88 63.72 161.37
AKP16040 (sdhA)
 141.35 413.79 69.54 251.64 153.14 269.34 140.9 287.29 142.77 65.16 142.21 198.55 294.15 402.76 244.78 223.98 337.37 205.58 79.0 551.72
AKP16041 (sdhB)
 133.71 438.32 85.35 302.72 109.36 255.03 179.86 317.99 187.8 64.45 306.87 202.67 346.35 294.53 169.51 228.99 294.07 353.2 75.23 715.68
AKP16044 (sucA)
 323.01 546.13 111.93 540.45 212.07 565.67 424.15 412.13 354.24 94.24 533.18 345.6 409.58 496.86 292.08 465.12 716.49 607.64 89.44 630.87
AKP16047 (WX61_02020)
 354.89 900.92 224.17 297.15 422.63 785.28 251.02 650.49 276.01 161.43 131.46 216.63 170.28 731.37 1364.17 824.07 727.09 140.3 180.95 228.74
AKP16071 (dld)
 119.23 230.54 62.03 187.0 191.39 261.61 141.94 246.9 97.43 41.84 327.01 98.09 435.1 358.99 262.32 214.46 332.34 333.1 57.64 490.63
AKP16110 (WX61_02084)
 154.61 214.63 104.7 155.5 111.92 153.08 132.37 201.43 142.53 127.32 59.74 128.87 287.07 230.23 231.64 154.61 150.8 89.34 83.16 148.35
AKP16200 (ybaB)
 331.22 510.66 227.42 317.09 366.37 445.5 284.07 496.02 339.12 292.21 551.9 243.61 392.13 760.95 786.63 465.9 414.9 566.2 174.56 103.09

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)