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Heatmap: Cluster_16 (HCCA)

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(Showing raw values)

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Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14174 (nrdB)
 474.5 258.04 79.87 566.5 242.03 368.69 615.5 236.46 542.23 128.35 840.6 553.26 189.96 335.98 362.19 366.55 371.9 772.38 53.28 559.26
AKP14182 (rsuA)
 293.13 188.69 145.85 389.38 264.1 98.52 404.63 223.71 403.16 71.43 569.09 320.33 286.9 159.5 93.58 85.88 117.48 515.95 70.32 121.06
AKP14184 (cmk)
 91.8 74.57 40.71 126.81 62.43 94.22 110.68 78.07 127.33 17.03 179.06 113.21 167.97 63.42 79.85 99.21 86.73 153.01 25.99 31.95
AKP14211 (WX61_00122)
 74.61 23.36 11.28 94.71 40.88 79.5 94.27 19.73 95.87 25.69 190.11 72.03 144.91 27.81 66.67 80.12 78.56 154.71 7.02 23.81
AKP14212 (hcpC)
 49.51 21.6 4.55 80.38 44.09 53.8 62.95 18.7 64.83 4.12 97.71 57.36 81.33 25.98 57.5 49.03 60.96 89.93 2.58 12.64
AKP14216 (uvrB)
 105.28 62.78 7.95 97.27 52.5 63.27 110.17 66.74 112.4 11.24 192.77 84.01 72.4 41.32 44.56 57.22 72.35 159.99 4.66 36.94
AKP14233 (WX61_00144)
 144.51 71.6 68.76 547.14 100.48 66.47 506.94 48.67 509.29 54.68 466.52 505.1 785.76 94.45 31.62 55.54 82.86 553.84 32.47 158.17
AKP14243 (ttcA)
 217.76 187.5 58.08 203.47 108.63 132.16 200.6 192.67 174.32 65.93 376.48 159.15 225.21 131.53 134.48 138.36 122.86 365.34 40.6 101.49
AKP14245 (WX61_00156)
 56.42 85.7 79.43 202.57 68.65 16.47 110.69 86.82 101.73 18.44 299.3 115.74 157.43 62.25 108.1 16.28 16.75 238.31 36.04 25.72
AKP14257 (sotB_2)
 38.71 31.1 24.99 69.62 33.24 28.94 46.61 33.45 43.66 8.41 55.0 51.02 96.67 34.18 65.35 25.03 34.8 75.5 15.98 14.8
AKP14261 (lcfB)
 98.4 77.96 21.32 181.57 114.08 101.9 144.04 76.84 139.76 20.26 141.72 157.31 132.96 62.07 60.1 95.96 110.8 128.55 17.53 47.42
AKP14280 (WX61_00191)
 520.96 431.88 163.63 606.05 489.98 622.92 392.41 314.75 316.63 66.51 736.29 321.3 855.32 582.71 475.74 520.89 775.95 913.31 118.05 245.19
AKP14339 (WX61_00251)
 228.66 98.49 39.98 162.42 110.14 142.14 133.57 91.48 117.07 22.92 232.13 125.86 237.53 136.06 161.59 116.03 181.3 247.06 27.58 83.38
AKP14348 (eptA)
 399.81 222.43 77.02 335.83 291.43 274.04 337.04 264.29 300.1 72.64 234.79 334.86 155.62 188.15 207.59 279.15 266.37 228.62 46.44 102.34
AKP14366 (WX61_00278)
 71.11 3.44 1.31 16.47 2.9 5.62 67.77 8.75 95.14 1.21 2.77 17.78 61.39 3.39 0.0 7.42 2.91 3.79 1.22 26.54
AKP14375 (yhbU)
 229.82 174.66 104.36 215.28 119.99 116.18 204.33 192.09 191.76 63.63 280.18 190.04 159.77 111.67 58.28 108.25 128.07 206.56 65.59 87.98
AKP14407 (WX61_00324)
 317.24 132.82 69.31 262.17 180.36 64.12 252.32 149.46 271.51 42.67 87.34 319.06 384.17 89.56 112.62 62.28 66.87 83.87 48.41 75.78
AKP14447 (relA)
 138.81 63.67 17.81 182.64 90.01 50.05 160.37 58.56 134.69 11.69 185.03 133.72 264.25 96.32 70.91 41.49 62.88 251.82 14.08 127.43
AKP14483 (WX61_00401)
 300.19 174.37 60.26 391.9 244.92 100.2 392.54 221.91 400.03 68.63 238.07 372.56 363.05 97.15 70.85 86.91 120.13 221.15 37.64 96.55
AKP14510 (WX61_00428)
 174.8 130.3 44.56 322.51 146.45 55.32 343.4 145.44 285.74 9.87 135.18 284.62 391.22 86.73 54.33 55.03 55.77 141.0 33.19 46.96
AKP14512 (dsbC)
 672.91 495.52 386.0 681.34 400.02 303.64 721.09 474.33 745.19 193.38 609.28 628.12 547.03 454.2 408.11 329.38 265.03 711.93 213.88 355.49
AKP14513 (macB)
 388.69 139.96 19.78 243.2 208.39 160.62 460.76 181.26 482.4 14.35 217.02 299.93 90.71 80.22 86.93 162.63 157.64 232.14 10.66 20.3
AKP14514 (macA)
 543.77 235.33 113.52 428.87 292.88 433.91 593.64 243.8 674.85 48.72 237.3 436.18 169.0 180.59 201.16 451.2 407.99 378.42 62.72 55.31
AKP14528 (WX61_00446)
 220.54 91.03 16.69 458.2 69.89 291.94 455.61 58.71 404.25 15.0 595.89 311.77 420.72 135.21 224.66 217.02 404.31 631.82 13.27 139.66
AKP14624 (putA)
 145.47 184.43 39.68 451.46 102.85 167.52 348.38 117.92 375.13 26.91 359.2 430.0 679.38 135.4 126.06 121.9 235.95 450.61 49.41 339.51
AKP14627 (yiaD)
 312.11 245.2 162.51 650.43 239.64 360.29 686.48 299.87 723.41 5.54 300.83 447.93 408.87 248.1 185.54 303.93 444.96 659.9 30.74 34.8
AKP14678 (tal)
 237.92 194.59 58.3 842.31 139.57 290.17 798.78 141.94 620.39 91.39 913.1 692.24 491.14 210.15 212.67 258.93 337.03 1045.83 45.39 528.4
AKP14732 (trkA)
 182.81 88.18 32.42 277.84 142.42 105.53 214.06 87.03 202.27 18.47 159.85 242.3 268.71 60.59 96.07 112.0 95.83 147.52 21.85 50.73
AKP14765 (gloB)
 69.7 61.1 45.0 198.71 51.25 33.94 195.53 42.56 216.55 26.23 239.29 164.86 289.91 35.47 22.65 29.49 40.6 212.38 25.95 45.25
AKP14772 (argJ)
 82.02 36.87 7.98 178.8 51.02 71.75 142.85 27.39 123.69 6.57 188.09 156.17 164.94 52.33 55.82 55.25 96.5 189.69 5.93 77.56
AKP14773 (clcA_2)
 57.47 36.16 5.31 95.41 38.43 39.07 82.9 33.33 83.56 6.34 64.86 119.91 96.91 31.04 53.34 37.44 41.51 64.74 3.3 20.56
AKP14778 (WX61_00705)
 65.71 42.18 9.61 73.67 39.74 30.87 78.45 47.52 85.17 9.29 100.19 78.71 74.52 28.0 44.18 31.37 30.12 83.47 6.91 23.27
AKP14818 (ubiI)
 460.79 167.43 62.93 536.38 253.35 325.38 592.73 176.21 509.46 67.21 961.37 410.59 537.37 267.2 459.65 314.02 342.41 927.94 47.74 367.13
AKP14845 (dmlR_2)
 115.6 87.76 43.89 270.67 67.27 114.09 263.41 75.48 246.88 34.46 366.52 198.69 233.31 137.15 107.16 86.68 155.21 410.37 29.11 135.09
AKP14847 (dinG)
 73.91 68.55 13.22 120.24 60.56 68.45 108.58 55.3 96.45 14.94 125.91 95.57 99.99 70.56 96.35 63.78 75.45 137.29 9.02 35.37
AKP14852 (rnb)
 167.62 149.84 43.88 166.04 111.54 127.99 157.28 163.75 152.81 59.36 215.66 177.06 190.48 98.3 89.81 134.75 117.84 189.85 40.13 74.06
AKP14859 (WX61_00792)
 105.69 98.98 22.95 111.63 65.62 73.66 114.25 112.59 93.04 12.61 166.7 116.4 107.23 77.57 61.56 77.36 68.12 172.0 16.87 28.59
AKP14861 (recQ)
 89.9 65.34 10.46 122.82 58.33 59.49 117.25 65.39 91.74 13.51 87.05 106.17 138.57 37.9 66.14 56.9 63.36 82.45 8.2 33.97
AKP14946 (ppc)
 226.67 273.85 78.7 650.96 188.41 352.83 504.85 232.29 433.54 87.92 442.89 487.98 909.21 265.92 274.25 290.8 445.87 460.51 102.31 353.56
AKP14977 (gmhA)
 755.04 350.32 72.18 1368.87 575.03 454.47 1146.75 315.35 971.48 46.69 1406.95 817.33 1795.84 394.45 514.62 388.71 553.11 1767.77 62.82 207.45
AKP15031 (tsaA)
 157.27 56.78 25.81 238.08 120.96 72.39 213.95 76.5 217.0 16.15 64.7 177.08 267.15 42.62 41.11 64.51 84.23 80.78 25.62 48.57
AKP15040 (ftsE)
 421.7 195.64 55.57 594.54 317.7 198.09 449.78 184.18 380.29 55.39 680.56 403.58 711.18 246.74 133.74 162.06 252.12 859.47 45.79 153.7
AKP15064 (rffG)
 63.4 58.91 8.56 130.69 49.1 56.79 111.25 58.77 86.1 7.76 65.79 96.25 120.91 46.91 53.75 50.64 66.01 75.24 8.95 67.55
AKP15067 (haeIIIM_1)
 315.19 81.73 177.21 531.24 140.75 129.1 591.54 90.7 522.45 220.3 490.28 526.11 70.09 141.69 111.55 134.55 120.92 432.67 149.68 387.26
AKP15096 (WX61_01038)
 305.46 390.03 170.49 591.44 175.06 389.77 462.21 343.59 486.67 134.61 1055.67 353.29 922.28 392.01 255.49 366.56 424.58 973.51 133.97 438.8
AKP15097 (topA)
 114.77 156.62 20.68 229.53 65.91 129.74 202.34 140.74 176.85 32.94 291.45 156.8 364.89 128.47 68.93 117.82 147.62 262.8 17.68 156.75
AKP15121 (tufA_2)
 3145.08 3682.5 237.75 5763.64 3043.87 18.95 4200.35 3013.57 3921.53 1469.48 12444.93 5284.43 5043.4 2130.43 0.0 9.09 33.75 8667.93 474.95 10103.6
AKP15155 (WX61_01101)
 229.34 143.2 54.52 99.27 143.74 95.69 444.97 150.02 430.16 41.13 31.31 78.08 306.99 92.55 46.51 92.19 100.92 25.0 43.7 98.06
AKP15163 (skp)
 534.04 575.28 63.67 625.83 512.16 436.0 687.86 555.5 541.66 204.12 905.04 544.28 255.47 463.81 281.49 377.38 523.92 1117.77 46.99 157.99
AKP15164 (bamA)
 579.06 360.06 57.82 820.47 417.59 450.6 829.4 312.1 684.33 135.61 822.28 703.18 640.63 375.92 363.2 379.38 557.42 858.48 48.94 391.63
AKP15165 (rseP)
 383.14 314.86 48.74 467.34 324.12 254.55 507.49 321.74 424.82 52.99 512.22 466.88 520.74 194.38 199.54 254.46 254.68 482.8 43.78 128.13
AKP15229 (yccA)
 2230.12 781.6 131.38 1908.26 763.37 836.41 2320.75 974.89 2382.89 106.7 1450.07 1952.88 771.45 1123.76 941.98 749.22 967.18 2161.98 103.17 356.53
AKP15230 (coaD)
 287.15 140.43 31.21 371.04 198.53 102.75 397.05 182.55 245.06 55.26 308.22 312.65 184.08 131.46 40.61 109.15 93.14 279.87 34.84 160.95
AKP15232 (WX61_01183)
 655.71 9.46 0.0 0.0 1.14 1.63 551.11 12.87 590.86 0.0 2.16 0.0 0.13 9.84 74.86 0.65 3.09 2.06 0.0 0.0
AKP15244 (lysA)
 161.92 149.53 95.11 323.95 157.23 94.73 279.12 111.74 271.55 66.98 336.25 335.37 324.85 123.08 70.52 100.61 85.91 247.83 71.61 76.07
AKP15258 (aldA)
 58.92 50.93 15.28 135.01 47.81 44.02 130.03 40.86 134.65 9.6 90.15 113.92 164.87 51.17 66.11 39.85 50.27 198.59 15.95 28.02
AKP15310 (WX61_01261)
 285.84 150.25 18.68 192.19 176.7 179.18 200.21 175.96 174.63 11.0 192.11 197.29 131.91 94.51 108.31 161.7 205.4 216.72 13.83 116.94
AKP15314 (plsX)
 144.96 105.63 52.57 202.1 122.36 66.97 212.69 97.31 182.15 22.35 320.7 168.58 334.57 69.43 61.47 56.84 82.18 244.89 43.33 33.01
AKP15315 (WX61_01266)
 293.4 320.08 98.83 427.01 203.89 123.72 391.91 235.2 357.48 124.26 846.3 340.11 345.02 326.54 118.49 116.87 134.01 696.31 118.63 89.34
AKP15399 (pglF)
 36.75 21.57 2.63 46.04 26.87 22.46 46.55 20.88 35.21 9.09 57.26 39.53 44.89 22.51 25.13 21.03 24.6 56.76 2.08 14.79
AKP15402 (WX61_01355)
 54.06 56.48 3.34 115.5 54.16 35.99 101.87 46.27 103.65 8.59 137.08 110.08 31.63 37.31 31.25 33.04 40.42 114.54 2.58 0.26
AKP15430 (rng)
 147.74 133.31 23.94 255.63 96.95 110.86 216.16 134.86 199.8 17.16 439.16 184.62 379.41 165.77 76.85 91.1 140.5 394.24 18.16 74.38
AKP15451 (nagZ)
 53.64 54.08 3.06 56.72 27.22 36.38 66.99 66.58 53.39 11.09 83.12 52.13 43.36 34.95 35.23 38.2 33.65 61.06 2.11 30.7
AKP15454 (nth)
 156.89 102.33 80.47 192.91 67.13 123.62 166.77 132.8 188.17 59.41 229.01 179.15 242.87 114.04 128.76 110.8 142.84 231.91 59.53 34.83
AKP15462 (WX61_01416)
 586.35 277.04 40.98 737.75 429.19 205.6 599.33 338.1 559.47 23.86 750.27 634.65 809.1 191.77 336.9 217.84 187.23 771.03 34.89 214.04
AKP15489 (ompR)
 1673.63 1217.51 384.1 2069.66 1100.2 744.64 2001.13 1163.5 2190.51 154.05 3386.45 1566.67 1946.21 1050.88 273.03 670.92 855.2 3458.65 191.86 590.5
AKP15490 (WX61_01444)
 81.8 43.49 10.35 109.45 64.76 30.53 126.69 33.84 111.94 20.34 105.39 104.82 107.16 34.13 24.2 28.73 33.23 99.85 59.11 25.51
AKP15491 (WX61_01445)
 72.34 20.51 15.1 158.0 49.56 39.03 141.29 18.23 155.08 17.74 82.67 169.88 89.81 19.82 24.91 36.53 42.8 58.55 76.84 26.27
AKP15506 (WX61_01460)
 162.88 7.37 0.0 30.93 51.14 0.0 146.33 28.82 135.86 0.0 0.77 51.81 93.19 9.42 2.61 0.0 0.0 2.05 0.0 5.77
AKP15509 (WX61_01463)
 240.49 122.86 54.29 238.85 171.29 108.89 262.36 159.4 285.77 31.69 56.92 305.49 306.79 96.58 112.78 106.71 112.16 62.83 48.61 64.67
AKP15520 (hisB)
 310.62 289.46 94.33 682.5 139.29 141.76 700.77 242.13 658.74 99.41 899.66 479.69 898.32 251.07 113.03 128.73 161.29 909.26 62.73 199.87
AKP15521 (hisC2)
 302.38 181.36 22.62 558.75 129.05 81.61 529.57 171.99 462.32 10.39 342.97 427.11 607.59 129.16 85.28 67.64 102.55 393.21 14.75 227.76
AKP15537 (purN)
 231.33 123.04 45.34 192.18 135.47 227.39 273.17 171.65 293.94 18.31 69.0 167.56 333.52 85.74 127.35 240.18 208.19 76.62 34.63 20.6
AKP15553 (WX61_01513)
 125.5 63.83 15.3 141.1 0.0 0.0 144.78 67.66 170.29 59.31 227.84 178.64 52.41 57.61 0.0 0.0 0.0 135.02 10.84 84.44
AKP15586 (pta)
 377.04 424.82 44.92 1266.66 229.65 493.73 1133.88 271.65 1028.23 34.26 1660.85 895.79 850.85 445.23 403.44 393.31 644.36 2190.64 36.41 788.31
AKP15606 (ridA)
 471.4 339.9 68.74 540.41 349.55 354.33 602.56 288.77 529.61 89.83 642.11 521.27 821.24 296.63 150.53 352.28 357.39 649.95 52.66 81.94
AKP15646 (WX61_01608)
 345.47 240.98 60.18 336.97 235.12 201.33 326.7 408.26 338.58 48.72 744.26 324.2 160.34 150.27 265.9 236.04 149.27 613.17 53.97 410.52
AKP15653 (rluD)
 384.39 160.45 49.12 286.22 196.31 189.34 371.25 215.07 396.31 26.95 97.7 339.28 295.39 95.2 128.36 190.33 187.85 86.0 32.51 44.24
AKP15708 (rmlD)
 206.52 127.71 72.69 312.54 136.79 68.39 250.73 98.45 211.4 61.99 395.84 171.49 432.81 207.1 94.13 63.17 76.22 416.78 55.8 99.88
AKP15711 (WX61_01676)
 169.33 111.55 71.81 211.35 101.88 81.62 181.58 112.57 187.74 34.07 149.81 207.96 199.88 79.09 69.28 88.89 70.71 136.97 60.69 35.19
AKP15746 (yfeX)
 215.42 131.26 28.39 279.32 114.98 92.34 237.28 131.03 237.5 16.96 325.32 223.86 349.35 114.83 126.27 87.79 99.17 373.24 19.31 35.31
AKP15765 (rluF)
 216.92 151.84 6.13 160.37 120.19 86.09 168.94 134.47 151.38 47.58 150.76 135.43 124.76 153.98 89.27 88.24 82.86 154.21 3.16 100.2
AKP15774 (htpX)
 1736.21 408.23 129.78 1087.26 1478.43 438.44 3383.06 497.24 3377.64 18.88 740.99 921.72 1273.14 376.15 407.08 437.46 439.91 1443.84 28.44 77.22
AKP15816 (rplY)
 1532.04 1555.99 674.81 1651.3 1553.95 1241.77 1598.5 1235.59 1370.79 1288.6 2649.99 1326.13 1401.54 1213.52 441.79 1365.03 1056.86 1936.12 762.1 1675.52
AKP15923 (WX61_01893)
 87.71 35.65 26.84 136.25 104.47 9.86 175.62 16.05 175.71 35.65 130.58 90.03 182.38 26.38 8.69 7.81 12.93 88.25 17.57 46.25
AKP16003 (WX61_01976)
 87.81 60.92 23.68 78.37 55.15 27.12 85.7 57.64 66.15 20.5 136.8 76.97 56.63 57.48 22.63 27.23 26.96 134.79 23.99 16.37
AKP16014 (piiC_13)
 542.26 1.37 5.4 360.31 2.98 0.3 330.53 1.95 354.94 3.97 727.02 202.94 307.88 0.69 18.89 0.5 0.0 731.86 4.89 25.48
AKP16058 (lutA)
 385.97 364.93 61.19 1109.33 257.88 581.15 767.71 324.89 668.69 108.29 1902.35 912.39 767.41 423.65 291.29 507.07 692.25 1435.77 55.84 833.72
AKP16060 (clsA)
 44.72 28.64 9.75 63.69 26.3 19.68 66.6 27.03 65.52 7.92 65.8 52.34 82.26 19.73 16.91 18.75 21.07 59.83 5.88 9.32
AKP16082 (WX61_02056)
 95.41 60.51 16.96 83.26 55.2 38.61 77.24 63.34 100.0 17.19 148.81 75.17 81.59 39.0 16.71 37.28 40.61 144.49 9.4 16.58
AKP16092 (glyA2)
 304.53 214.86 150.1 706.75 268.01 200.06 651.32 196.66 1010.92 65.72 437.8 585.47 714.2 340.32 150.47 172.24 241.79 849.41 84.92 301.77
AKP16104 (crcB)
 194.48 70.64 27.28 119.68 50.06 108.1 127.48 78.78 124.57 15.23 205.36 109.55 139.33 117.4 103.0 88.8 137.04 229.11 19.78 30.03
AKP16121 (yciK)
 161.65 149.34 85.63 300.02 108.86 132.27 221.29 116.5 209.61 99.84 424.83 193.9 450.49 198.43 101.79 123.11 146.01 388.01 64.79 78.88
AKP16137 (mpl)
 191.04 229.89 53.24 460.17 212.41 251.0 396.11 194.42 431.86 24.45 330.38 399.18 664.76 231.73 224.78 208.48 314.77 425.59 45.12 188.05
AKP16150 (guaB)
 830.24 438.62 527.64 656.68 593.97 273.04 652.75 365.43 503.59 204.02 1015.16 554.87 813.92 438.45 324.86 234.03 331.6 1087.27 309.33 293.8
AKP16159 (hflK)
 248.82 148.6 111.14 380.5 182.87 185.77 366.19 124.92 343.28 143.91 485.58 343.55 430.5 335.04 167.49 148.46 241.73 781.92 106.02 327.86
AKP16171 (WX61_02147)
 261.61 82.34 1.22 37.3 131.43 193.16 449.51 138.26 417.12 1.23 45.6 178.32 69.81 51.77 244.97 205.78 174.23 42.63 1.05 50.5
AKP16185 (WX61_02161)
 1144.07 806.69 126.7 2362.56 1050.61 420.99 2204.25 1100.0 2320.44 12.95 1529.56 2044.23 656.61 503.0 505.55 390.27 467.08 1786.12 19.88 220.51
AKP16248 (hsdR_2)
 68.28 38.95 13.0 65.12 33.53 24.56 62.14 47.16 62.54 22.69 70.56 52.93 50.47 36.04 31.63 24.78 24.23 70.78 6.44 14.25

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)