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Heatmap: Cluster_22 (HCCA)

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(Showing raw values)

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Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14103 (WX61_00014)
 187.23 200.61 56.3 136.95 151.41 178.89 163.43 221.25 144.68 27.65 114.16 122.24 253.88 207.51 174.27 181.38 175.16 139.71 43.08 151.57
AKP14109 (WX61_00020)
 38.74 81.27 40.83 78.64 39.77 81.02 74.07 76.94 55.04 22.46 43.57 46.22 132.14 54.21 45.14 83.13 77.85 41.38 22.27 43.56
AKP14165 (mfd)
 85.23 65.55 18.13 68.21 71.22 84.62 65.45 91.83 57.99 8.21 70.11 52.23 179.5 61.58 81.07 79.05 92.97 77.62 11.91 33.86
AKP14217 (ctpB)
 210.32 242.52 68.73 285.43 274.68 279.25 238.08 280.01 207.2 93.6 144.16 185.09 308.49 247.86 337.03 289.21 264.3 152.97 56.61 163.41
AKP14241 (yabJ)
 609.95 406.83 84.93 492.31 371.04 373.29 520.18 351.54 523.37 55.64 154.87 444.42 606.38 372.84 588.29 401.56 330.88 195.81 62.35 319.65
AKP14370 (spoT)
 349.94 337.61 220.58 313.49 344.18 218.77 298.76 430.38 275.05 148.32 295.71 264.19 392.23 300.05 398.89 218.94 218.5 424.72 149.96 129.9
AKP14385 (tag)
 233.73 161.73 21.68 166.44 160.69 54.18 183.07 207.07 178.43 21.17 155.31 158.15 153.09 82.89 30.29 60.97 44.0 151.39 10.5 18.02
AKP14571 (rlmL)
 196.79 188.0 28.08 221.81 206.19 262.07 211.77 222.0 178.26 23.2 214.62 193.69 405.04 160.9 229.93 252.75 276.06 195.95 22.98 72.38
AKP14605 (ftsW)
 125.5 159.84 46.6 186.16 137.86 147.01 165.65 174.51 187.34 49.43 37.94 149.73 201.9 138.4 231.97 153.09 137.88 41.91 43.5 76.34
AKP14638 (WX61_00559)
 23.88 43.27 5.25 48.65 22.97 17.25 40.84 41.77 60.64 2.25 4.93 53.34 50.86 39.55 39.0 12.2 24.82 7.49 3.28 8.95
AKP14639 (WX61_00560)
 21.23 35.1 3.53 60.49 15.26 25.21 57.46 34.46 51.25 1.24 7.06 67.49 64.16 34.81 63.19 20.06 32.93 4.04 2.68 7.15
AKP14774 (WX61_00701)
 81.42 62.03 6.78 131.89 44.63 62.63 100.81 56.75 90.98 11.85 50.78 101.84 96.4 48.48 47.07 64.04 60.5 51.22 4.01 12.46
AKP14855 (WX61_00788)
 625.58 443.01 70.12 616.16 595.11 356.14 533.56 531.68 379.84 84.61 272.31 495.14 549.66 494.2 508.98 369.94 335.44 274.31 76.97 399.71
AKP14915 (mltA)
 103.73 149.29 30.29 104.93 42.88 152.13 88.61 161.63 85.03 25.12 127.72 79.19 171.67 146.91 125.65 151.44 153.23 145.39 29.19 87.16
AKP14930 (manX)
 186.99 128.79 77.48 190.85 214.08 114.4 177.84 142.93 181.39 49.24 127.09 192.92 263.04 158.35 185.01 120.41 105.38 129.26 68.25 280.56
AKP14955 (WX61_00889)
 193.37 177.83 45.87 177.19 139.35 193.53 141.4 188.14 127.53 23.54 118.77 136.63 383.39 153.14 139.33 185.79 205.14 142.05 41.88 70.98
AKP15006 (WX61_00943)
 138.45 68.97 8.64 93.88 249.35 20.59 140.33 133.38 59.54 2.9 17.37 130.09 462.68 69.19 100.87 26.99 10.99 32.07 12.4 286.5
AKP15009 (tamA)
 166.82 292.07 82.85 309.72 165.89 189.02 251.22 297.22 204.04 72.48 299.17 231.44 616.2 205.0 173.45 181.08 200.93 347.57 90.92 74.6
AKP15167 (cdsA)
 454.96 416.98 66.33 453.57 513.5 408.56 440.43 408.75 392.55 44.68 206.54 413.95 596.39 305.48 454.95 442.11 358.25 227.49 74.32 202.43
AKP15180 (pdxA1)
 91.69 114.76 23.06 132.74 91.21 91.27 116.84 129.73 92.65 18.29 148.88 114.47 172.17 78.39 118.2 93.86 87.38 129.14 22.03 61.7
AKP15255 (WX61_01206)
 63.65 121.0 11.52 70.49 72.34 62.96 62.18 92.36 61.08 7.43 66.93 60.18 95.39 101.27 73.92 63.06 62.82 75.31 9.14 11.4
AKP15335 (secG)
 6142.22 3469.91 1784.02 5896.4 6656.88 1711.12 6305.56 6320.19 6737.2 1192.53 4424.64 7900.11 4729.16 2221.18 1916.6 1634.65 1825.79 4140.86 1417.43 1070.64
AKP15354 (dxs)
 250.74 285.39 113.63 296.86 191.72 296.73 252.44 312.93 202.55 67.12 268.52 215.31 457.88 239.41 293.67 291.97 303.86 311.56 94.35 141.63
AKP15548 (fadD)
 116.67 82.26 26.74 68.79 96.79 113.0 69.02 101.01 76.15 13.31 145.16 74.91 198.05 84.44 117.21 113.3 112.55 153.27 20.77 35.27
AKP15562 (WX61_01522)
 382.34 429.57 89.57 335.26 444.46 413.34 366.56 477.95 323.67 140.39 173.93 328.41 335.76 319.5 515.56 390.18 448.06 183.37 87.04 210.81
AKP15629 (pyrC)
 37.59 51.13 36.45 52.77 39.97 63.97 43.84 56.88 31.98 19.34 51.17 35.3 130.51 38.52 43.22 66.04 60.86 43.82 24.5 17.81
AKP15655 (yfiH)
 86.28 106.43 61.19 134.97 98.72 136.24 132.1 112.31 147.57 33.64 103.6 112.31 233.47 104.07 133.13 125.16 152.84 103.11 35.16 49.06
AKP15712 (WX61_01677)
 100.1 157.26 121.27 148.03 101.42 161.81 117.05 155.99 133.12 26.59 146.1 117.6 284.43 105.42 77.41 146.49 184.78 106.05 68.24 21.94
AKP15724 (ycfH)
 518.71 438.09 117.52 372.92 513.22 324.26 350.81 473.17 307.3 118.53 299.58 278.74 431.0 368.57 466.62 331.78 312.97 333.72 104.41 361.56
AKP15735 (hemX)
 259.48 233.8 133.12 277.9 204.55 253.1 261.32 266.39 237.97 87.36 156.16 210.54 381.04 267.66 264.17 239.11 274.08 173.37 86.61 211.02
AKP15756 (pasI)
 162.67 167.81 65.58 260.86 154.03 171.82 281.09 199.57 217.64 102.08 27.09 218.98 368.86 106.56 317.67 176.28 165.13 34.52 87.04 66.8
AKP15791 (pcnB)
 282.37 313.44 134.61 286.1 214.39 275.01 242.22 381.16 201.74 91.66 134.58 201.11 334.21 225.03 528.32 287.92 255.65 128.81 113.0 101.35
AKP15793 (ybeZ)
 255.22 249.93 160.52 272.91 222.7 182.58 269.53 244.25 271.13 120.35 129.89 210.85 402.28 224.39 312.6 194.23 165.1 135.63 122.53 108.7
AKP15810 (panB)
 321.39 354.97 130.63 296.54 384.46 247.83 212.68 384.33 225.84 119.28 164.58 180.23 346.78 290.75 290.15 270.1 214.44 175.94 112.33 142.47
AKP15811 (panC)
 206.51 258.63 46.1 169.27 155.33 179.5 148.44 267.64 192.27 30.79 72.34 173.7 254.45 228.77 366.6 202.49 145.01 80.28 47.53 47.27
AKP15815 (prs)
 703.36 825.47 263.55 532.63 893.73 813.57 528.96 980.92 515.45 167.39 700.0 472.86 1165.44 650.01 867.98 785.65 855.45 642.15 252.41 700.86
AKP15974 (dnaG)
 229.94 109.42 8.58 114.02 145.29 68.62 129.47 148.3 160.43 27.9 60.08 139.92 65.35 80.97 95.28 69.26 67.66 85.89 5.5 30.96
AKP16008 (tcdA)
 136.0 89.88 26.82 89.94 119.12 67.17 87.4 131.11 83.63 14.24 115.1 80.15 158.06 79.39 108.43 69.29 64.0 124.67 18.88 46.45
AKP16069 (WX61_02042)
 84.14 131.67 47.71 99.55 52.55 108.91 101.81 114.05 121.05 11.63 143.77 84.93 214.76 88.01 80.95 106.21 112.96 125.23 28.71 74.45
AKP16133 (rlmB_2)
 71.19 140.39 70.89 134.07 58.78 100.11 112.81 131.04 111.42 38.22 34.85 145.53 157.01 116.14 177.24 105.5 92.01 38.71 48.31 95.16
AKP16142 (cysI_2)
 7.37 23.29 18.91 27.67 16.99 20.79 37.69 29.42 14.56 4.79 19.53 28.52 62.01 32.03 22.45 24.94 14.56 24.74 9.4 5.72
AKP16144 (cysJ_2)
 5.02 8.67 0.98 13.36 6.28 9.67 8.23 11.47 11.07 0.46 2.88 9.19 22.56 9.29 11.42 10.31 8.72 3.36 0.67 4.98
AKP16186 (WX61_02162)
 132.13 105.93 55.05 258.79 125.04 133.25 219.19 129.34 173.97 33.63 49.88 163.44 192.72 94.05 194.53 135.18 130.35 53.44 33.31 117.1
AKP16202 (aroD)
 63.41 81.63 28.03 80.66 63.87 74.9 72.03 107.27 61.76 8.21 76.87 77.44 150.8 62.87 106.54 77.39 71.16 80.49 20.22 18.66
AKP16234 (mutY)
 28.26 31.53 17.62 47.11 27.54 36.12 43.47 41.76 31.75 4.78 48.26 30.19 91.1 30.86 31.19 35.3 37.35 53.49 11.97 21.16

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)