Heatmap: Cluster_15 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14092 (WX61_00003)
0.83 -0.4 0.76 0.33 0.03 -0.74 0.25 0.0 0.23 -0.29 -3.02 0.1 -0.33 -0.62 1.27 -0.58 -1.01 -3.24 0.14 0.38
AKP14093 (prn)
0.69 -0.91 0.67 0.66 0.13 -0.51 0.52 -0.65 0.43 -0.09 -2.47 0.37 -0.11 -1.12 1.05 -0.56 -0.43 -2.65 0.09 -0.06
AKP14115 (WX61_00026)
0.07 0.01 0.45 0.1 -2.24 -0.49 -0.12 -0.02 0.23 0.68 -3.42 0.11 -2.26 -0.39 2.4 -0.23 -0.99 -3.53 -0.48 -1.74
AKP14116 (WX61_00027)
0.32 0.15 -0.01 0.69 -0.15 -1.08 0.38 0.1 0.24 -0.05 0.63 0.2 -0.75 -0.08 0.23 -1.01 -1.21 0.56 -0.94 -0.31
AKP14161 (WX61_00072)
-13.65 0.15 -5.7 1.28 1.97 0.26 -13.47 1.03 - -5.89 -28.19 -7.25 -4.57 -0.49 2.56 -0.15 0.72 -16.79 -3.98 -
AKP14187 (adhR)
-0.46 -0.0 0.36 1.14 0.61 -2.88 0.75 0.86 0.61 -2.09 -4.86 1.2 -0.34 0.12 0.78 -2.82 -2.99 -3.93 -0.31 -0.3
AKP14244 (WX61_00155)
-1.16 0.44 -0.86 1.41 -0.21 -1.23 0.02 0.34 -0.21 -2.39 0.27 0.17 0.73 -0.05 1.58 -1.14 -1.39 0.09 -2.16 -1.78
AKP14254 (WX61_00165)
-0.46 0.27 -1.95 0.1 -1.73 -0.37 -0.46 0.2 -0.27 -1.83 0.58 0.09 -0.47 0.14 1.7 -0.45 -0.26 0.7 -2.19 0.69
AKP14279 (WX61_00190)
0.46 -1.78 -0.1 0.33 0.28 0.0 -0.08 -1.71 -0.24 -0.91 -0.75 0.24 -1.14 -0.37 1.88 -0.11 0.16 0.21 -0.45 -0.59
AKP14328 (WX61_00240)
-28.19 0.13 -2.74 -2.82 1.46 0.89 -18.89 0.75 - -2.84 -3.3 -4.59 0.01 -0.53 2.18 0.92 0.84 -2.86 -3.5 0.94
AKP14372 (gmk)
0.44 -0.19 -1.92 0.15 1.15 0.36 -0.06 0.15 -0.11 -2.21 -3.6 -0.07 -0.71 -0.01 1.72 0.26 0.5 -2.99 -2.26 -0.33
AKP14397 (rppH)
0.4 0.52 -0.89 -0.2 0.82 -0.0 -0.25 0.6 -0.45 -1.85 -1.86 -0.07 0.25 0.57 1.24 -0.02 0.02 -2.1 -0.88 -0.59
AKP14421 (WX61_00339)
0.18 0.12 -1.25 -0.18 -0.32 -0.44 -0.26 0.19 -0.61 -1.72 -0.1 -0.32 -0.12 0.19 2.14 -0.2 -0.9 0.54 -1.13 -1.04
AKP14434 (WX61_00352)
-0.7 -0.47 -1.72 0.01 0.74 -0.06 -0.35 -0.62 0.02 -0.67 0.09 0.29 0.79 0.34 1.6 -0.31 0.24 -2.55 -1.37 -0.36
AKP14508 (ssuB)
0.02 0.34 -0.44 0.48 -0.17 -0.65 0.1 0.21 -0.07 -0.72 -0.95 0.21 -0.54 0.34 1.39 -0.73 -0.53 -0.44 -0.57 0.4
AKP14518 (WX61_00436)
0.59 0.36 0.07 0.03 -0.16 -0.86 0.33 0.54 0.28 -3.04 -3.46 0.33 0.8 -0.09 1.58 -0.95 -0.75 -3.3 -0.07 -1.07
AKP14550 (WX61_00469)
0.07 0.0 -0.21 0.33 -0.18 -1.08 0.34 0.26 0.38 -0.23 0.34 0.39 -0.81 -0.32 0.81 -1.08 -1.09 0.16 -0.75 0.58
AKP14562 (WX61_00481)
-0.98 -0.82 -0.54 -0.27 -0.94 0.06 -1.66 -0.35 -1.85 -2.04 -3.38 -0.53 1.7 -0.84 2.61 0.22 -0.23 -3.6 -1.23 -0.02
AKP14676 (kdsC)
0.7 -0.55 0.13 0.49 0.01 -0.13 0.37 -0.28 0.17 -0.08 -1.18 0.29 0.01 -0.63 0.35 -0.26 0.04 -0.72 -0.13 0.15
AKP14727 (WX61_00649)
0.26 0.16 -0.38 0.22 -0.29 -0.02 -0.4 0.26 -0.41 0.22 0.15 -0.35 -0.02 0.37 0.5 0.12 -0.27 0.31 -0.69 -0.48
AKP14739 (WX61_00662)
-12.68 0.75 -0.41 -5.68 2.7 -4.28 -2.63 1.99 -11.84 -1.34 0.09 -2.22 -14.22 0.56 0.78 -3.55 -14.53 0.21 -0.38 -
AKP14813 (WX61_00741)
0.99 0.57 -0.17 0.43 0.25 -1.15 0.36 0.64 0.31 -1.19 -4.01 0.39 0.64 0.17 0.43 -0.93 -1.56 -4.15 -0.31 -0.01
AKP14882 (nuoJ)
-0.41 -0.23 -2.89 -0.04 0.93 0.52 -0.36 0.4 -0.27 0.03 -0.85 -0.2 -0.63 -0.49 1.41 0.42 0.66 -1.0 -3.61 0.08
AKP14935 (petC)
-0.12 -0.35 -1.28 -0.29 0.02 0.12 -0.87 -0.41 -0.91 -0.03 -1.24 -0.4 -0.82 0.47 1.91 0.0 0.29 -1.21 -1.08 1.09
AKP14950 (prmC_1)
-0.04 -0.62 -2.08 0.21 -0.48 0.4 -0.24 -0.28 -0.4 -1.73 -2.2 -0.14 0.3 0.34 2.06 0.28 0.56 -1.84 -1.81 0.22
AKP14997 (WX61_00934)
0.13 -2.14 0.52 0.5 0.61 -1.0 0.4 -2.04 0.36 0.4 -6.8 0.66 -2.3 -1.4 1.88 -0.92 -1.12 -6.32 0.03 0.81
AKP15007 (WX61_00944)
0.39 0.27 -0.64 0.38 0.55 -0.8 0.19 0.54 0.34 -0.66 -2.29 0.53 0.78 -0.16 -0.32 -0.66 -1.02 -2.43 -0.03 0.74
AKP15029 (rfaC)
0.67 0.01 0.6 0.53 -0.08 -0.97 0.27 0.46 0.28 0.09 -1.54 0.49 -0.43 -0.46 0.84 -0.86 -1.15 -1.55 0.44 -1.26
AKP15038 (arsC)
0.08 -0.42 -3.88 0.47 0.18 -0.45 0.08 -0.51 -0.23 -3.6 -1.59 -0.21 0.04 0.87 2.08 -0.55 -0.31 -1.26 -3.53 0.94
AKP15206 (WX61_01157)
-0.02 -0.74 -0.3 0.34 -0.95 -0.26 0.44 -0.64 0.38 -1.5 -0.27 -0.14 1.21 -0.27 1.57 -0.19 -0.36 -0.51 -0.35 -1.53
AKP15313 (WX61_01264)
0.38 0.33 -1.91 0.62 0.34 -1.23 0.61 0.81 0.59 -2.57 -2.99 0.91 -0.03 -0.09 1.92 -1.2 -1.27 -4.15 -2.21 -2.53
AKP15358 (WX61_01310)
0.38 -2.4 -4.61 -15.23 1.44 -0.58 0.95 -1.16 1.28 -4.65 -9.31 -0.22 0.63 -2.09 2.6 -0.89 -0.21 -8.41 -4.05 -4.25
AKP15395 (WX61_01348)
-0.32 -0.62 -0.02 -0.28 -0.92 -0.03 -0.49 -0.74 -0.79 -0.82 -1.53 -0.76 -1.08 -0.49 2.87 0.14 -0.34 -1.56 -0.42 -1.57
AKP15417 (engB)
-0.07 -1.34 -0.73 0.24 0.67 -0.95 0.14 -1.12 0.54 -0.7 -0.63 0.5 1.01 -0.5 1.67 -1.01 -0.86 -1.01 -0.96 0.13
AKP15625 (tusA)
-0.25 0.3 -2.12 -1.03 -0.29 -0.2 -0.71 0.45 -0.94 -1.8 -0.54 -0.96 -1.84 0.32 2.78 -0.12 -0.32 -0.42 -2.42 -1.14
AKP15680 (ihfA)
0.28 -1.39 -1.07 0.0 0.11 -0.1 0.36 -1.98 0.63 -0.38 -2.08 0.54 -2.13 -1.19 2.43 0.16 -0.59 -2.16 -1.66 -0.01
AKP15705 (xerD)
0.66 -0.7 -0.11 0.17 -0.42 -0.25 0.7 -0.52 0.74 -1.5 -0.8 -0.26 0.7 -1.12 -0.09 -0.34 -0.11 -0.62 -0.34 1.15
AKP15730 (WX61_01695)
0.67 -2.03 0.15 0.54 0.65 -1.41 0.95 -1.36 0.55 -0.55 -0.3 0.79 -2.27 -1.55 1.41 -1.3 -1.6 0.31 -0.2 -0.74
AKP15759 (rlmE)
0.96 0.33 -0.6 0.42 0.25 -0.29 0.15 0.81 -0.02 -0.52 -1.71 0.36 -0.03 0.05 0.49 -0.3 -0.27 -1.65 -0.9 -0.41
AKP15760 (WX61_01725)
0.89 0.28 -0.57 -0.07 0.07 0.26 -0.11 0.14 -0.43 -0.95 -3.06 -0.11 -1.0 0.27 1.83 0.39 0.05 -2.83 -0.92 -1.14
AKP15772 (hisZ)
-0.31 0.26 -0.18 -0.14 0.5 0.26 -0.54 0.34 -0.57 -0.74 -0.68 -0.44 0.04 0.0 0.96 0.14 0.42 -0.83 -0.29 0.27
AKP15788 (WX61_01753)
0.55 -0.53 -1.43 -0.12 0.51 0.18 -0.42 -0.31 -0.48 -0.92 -0.29 -0.21 0.06 -0.2 1.71 0.17 0.19 -0.39 -1.49 -0.08
AKP15814 (ispE)
-0.54 -0.92 0.82 -1.03 0.34 -1.48 -0.71 -0.0 -0.76 -1.07 -4.39 -0.8 -1.15 -1.17 3.04 -1.38 -1.65 -4.62 0.56 -1.89
AKP15910 (WX61_01880)
0.61 -0.56 -1.54 0.44 0.37 0.15 0.32 -0.81 0.24 -1.53 -2.39 0.33 0.0 0.15 1.69 -0.07 0.43 -2.1 -1.42 -0.65
AKP15972 (WX61_01944)
1.51 0.85 -2.8 0.31 0.32 -2.12 0.32 1.63 0.45 -3.3 -6.09 1.03 0.44 -0.2 -0.62 -3.26 -1.25 -4.44 -4.05 0.14
AKP16001 (glnP)
0.53 0.01 -1.57 -0.14 0.77 0.23 -0.16 0.0 -0.15 -1.53 -3.14 -0.18 0.55 0.24 1.52 0.3 0.14 -3.05 -1.37 -0.1
AKP16027 (WX61_02000)
-0.18 0.34 0.31 0.53 0.49 -0.87 -0.15 0.73 -0.08 -1.0 -1.51 0.65 0.37 0.14 -0.09 -0.83 -0.94 -1.5 -0.02 0.61
AKP16098 (WX61_02072)
-0.32 -0.86 0.68 -0.65 0.9 -0.79 -0.7 -1.2 -0.69 -0.14 -1.0 -0.45 -1.16 -0.92 2.24 -1.02 -0.49 -0.71 0.52 0.26
AKP16188 (mobA)
0.15 -0.93 -2.13 0.34 0.51 -0.81 0.38 -0.67 0.3 -1.65 -1.33 0.99 0.41 0.29 1.47 -0.82 -0.81 -0.85 -2.0 0.8
AKP16192 (WX61_02168)
-0.87 -0.78 -20.3 0.12 -0.29 0.49 -0.43 -0.4 -0.52 -17.82 -0.29 0.15 -0.53 -1.95 2.76 0.47 0.52 -0.59 -19.97 -2.03
AKP16223 (WX61_02199)
-0.17 -0.8 -2.03 -0.21 0.2 0.28 0.28 -0.01 0.35 -2.22 -4.98 0.6 0.05 0.18 2.15 -0.21 0.79 -4.25 -2.56 -1.28

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.