Heatmap: Cluster_73 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
AES-1R,ASMDM+
AG1,ciproflaxin
D+7bld
DK2
E01
LB
LB,log
LB,untreated
PA1201
PA14
PA14,0.25xMIC G3KL
PA14,0.25xMIC T7
PA14,0.25xMIC polymyxin-B
PA14,LB
PA14,LB,log
PA14,WT
PA14,ciproflaxin
PA14,cmrA+
PA14,late stat,NaPyruvate+Arabinose
PA14,late stat,untreated
PA14,sutA-KO,late stat,NaPyruvate+Arabinose
PA14,untreated
PA212
PA2596
PA558
PA580
PAK,LB
PAK,WT
PAK,WT,LB
PAK,pilR
PAK,pmrB6,LB
PAO1
PAO1,0.56mg/mL farnesol
PAO1,ABTGC
PAO1,DDS
PAO1,GUN,LB,glucose
PAO1,HapZ,early stat
PAO1,LB
PAO1,LB,glucose
PAO1,LB,untreated
PAO1,M9-CA,early stat
PAO1,M9-CA,log
PAO1,RsmN+
PAO1,SagS,early stat
PAO1,WT
PAO1,WT,BHI
PAO1,WT,LB
PAO1,WT,MOPS acetate
PAO1,WT,MOPS glycerol
PAO1,early stat
PAO1,ersA,BHI
PAO1,lasR rhlR,M9-CA,early stat
PAO1,lasR rhlR,M9-CA,log
PAO1,liquid culture
PAO1,mexZ,LB
PAO1,oxylipin-
PAO1,pBAD-yhjH
PAO1,pUCP18::msr(E)
PAO1,qslA,M9-CA,early stat
PAO1,qslA,M9-CA,log
PAO1,qteE,M9-CA,early stat
PAO1,qteE,M9-CA,log
PAO1,untreated
PAO1,wspFpelApslBCD,LB
PAO1,wspFpelApslBCD,LB,untreated
Y31,LB
Y71,LB
Y82,LB
Y89,LB
ciproflaxin
liquid culture
m pheno
mexT
nirS
pHerdB20T-gp68
untreated
CRP34883 (puuB_8)
24.44 22.56 10.82 7.01 46.69 18.53 16.39 24.67 3.35 17.83 14.65 16.28 20.11 24.45 14.81 44.77 14.95 10.27 7.92 18.34 8.72 14.65 4.05 7.71 14.43 17.37 35.08 8.25 8.74 6.38 72.78 13.06 10.36 13.57 6.6 20.39 3.45 18.46 11.82 11.29 10.69 13.47 7.61 2.83 10.32 20.29 13.47 6.45 7.65 3.8 14.13 9.55 12.53 26.54 10.49 3.29 25.49 4.24 7.32 11.1 7.23 12.38 5.62 2.32 2.94 49.04 59.31 51.35 69.78 14.52 11.95 7.82 10.14 34.38 32.38 8.85
CRP34915 (puuA_4)
16.2 13.28 9.37 10.0 69.33 13.19 7.79 19.76 1.44 8.61 3.44 4.42 7.05 6.74 3.8 31.1 10.36 1.26 2.92 4.58 3.38 4.91 3.22 2.99 10.22 9.26 12.12 3.18 2.12 3.61 42.71 7.39 7.33 7.0 3.4 6.55 1.79 5.7 4.45 3.66 1.58 1.42 6.94 1.66 5.4 7.93 2.36 3.57 7.39 2.16 5.36 1.27 1.72 10.82 3.89 0.09 7.38 1.51 2.9 1.41 1.82 1.31 1.83 0.82 1.12 21.02 39.48 25.2 41.55 2.5 5.8 4.05 1.58 11.44 40.56 2.51

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)