Heatmap: Cluster_91 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
AES-1R,ASMDM+
AG1,ciproflaxin
D+7bld
DK2
E01
LB
LB,log
LB,untreated
PA1201
PA14
PA14,0.25xMIC G3KL
PA14,0.25xMIC T7
PA14,0.25xMIC polymyxin-B
PA14,LB
PA14,LB,log
PA14,WT
PA14,ciproflaxin
PA14,cmrA+
PA14,late stat,NaPyruvate+Arabinose
PA14,late stat,untreated
PA14,sutA-KO,late stat,NaPyruvate+Arabinose
PA14,untreated
PA212
PA2596
PA558
PA580
PAK,LB
PAK,WT
PAK,WT,LB
PAK,pilR
PAK,pmrB6,LB
PAO1
PAO1,0.56mg/mL farnesol
PAO1,ABTGC
PAO1,DDS
PAO1,GUN,LB,glucose
PAO1,HapZ,early stat
PAO1,LB
PAO1,LB,glucose
PAO1,LB,untreated
PAO1,M9-CA,early stat
PAO1,M9-CA,log
PAO1,RsmN+
PAO1,SagS,early stat
PAO1,WT
PAO1,WT,BHI
PAO1,WT,LB
PAO1,WT,MOPS acetate
PAO1,WT,MOPS glycerol
PAO1,early stat
PAO1,ersA,BHI
PAO1,lasR rhlR,M9-CA,early stat
PAO1,lasR rhlR,M9-CA,log
PAO1,liquid culture
PAO1,mexZ,LB
PAO1,oxylipin-
PAO1,pBAD-yhjH
PAO1,pUCP18::msr(E)
PAO1,qslA,M9-CA,early stat
PAO1,qslA,M9-CA,log
PAO1,qteE,M9-CA,early stat
PAO1,qteE,M9-CA,log
PAO1,untreated
PAO1,wspFpelApslBCD,LB
PAO1,wspFpelApslBCD,LB,untreated
Y31,LB
Y71,LB
Y82,LB
Y89,LB
ciproflaxin
liquid culture
m pheno
mexT
nirS
pHerdB20T-gp68
untreated
CRO36183 (dmlR_11)
0.18 -0.87 -0.82 0.31 2.15 0.44 0.29 -0.81 -0.09 0.16 -0.02 -0.05 -0.09 0.63 0.45 0.15 -0.19 -0.46 0.22 0.83 0.55 -0.05 -0.87 -0.42 0.22 0.04 -1.44 0.0 -1.02 0.57 -1.28 -0.01 -0.62 -0.47 -1.07 0.91 0.05 -0.96 0.03 -0.06 -0.01 -1.07 0.08 -0.1 -0.33 0.27 -1.51 0.14 0.3 -0.05 0.23 -0.45 -1.16 -0.05 -1.05 0.11 0.04 -0.31 -0.08 -1.21 -0.04 -1.11 -0.6 -0.67 -0.72 0.2 0.63 0.01 0.11 -0.08 0.29 0.22 -0.61 -0.52 1.49 -0.51
0.39 -0.61 -0.64 0.69 1.61 0.61 0.45 -1.01 0.07 0.64 0.56 0.71 0.51 0.95 0.81 1.3 -0.06 0.26 1.25 1.41 1.42 0.33 -0.72 0.09 0.55 0.33 -1.5 -0.17 -1.53 -0.02 -1.33 -0.12 -0.08 -0.62 -1.77 0.77 -0.47 -1.83 -0.02 -0.02 -1.89 -3.01 0.06 -0.58 -0.67 0.09 -1.5 -0.04 0.04 -0.63 -0.14 -1.84 -2.67 -0.37 -1.24 -1.61 -0.48 -0.76 -1.42 -3.77 -1.69 -3.06 -0.94 -1.34 -1.46 0.12 0.24 -0.16 -0.51 -0.32 0.17 0.75 0.26 -0.65 1.51 -0.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.