Heatmap: Cluster_110 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene	AES-1R,ASMDM+	AG1,ciproflaxin	D+7bld	DK2	E01	LB	LB,log	LB,untreated	PA1201	PA14	PA14,0.25xMIC G3KL	PA14,0.25xMIC T7	PA14,0.25xMIC polymyxin-B	PA14,LB	PA14,LB,log	PA14,WT	PA14,ciproflaxin	PA14,cmrA+	PA14,late stat,NaPyruvate+Arabinose	PA14,late stat,untreated	PA14,sutA-KO,late stat,NaPyruvate+Arabinose	PA14,untreated	PA212	PA2596	PA558	PA580	PAK,LB	PAK,WT	PAK,WT,LB	PAK,pilR	PAK,pmrB6,LB	PAO1	PAO1,0.56mg/mL farnesol	PAO1,ABTGC	PAO1,DDS	PAO1,GUN,LB,glucose	PAO1,HapZ,early stat	PAO1,LB	PAO1,LB,glucose	PAO1,LB,untreated	PAO1,M9-CA,early stat	PAO1,M9-CA,log	PAO1,RsmN+	PAO1,SagS,early stat	PAO1,WT	PAO1,WT,BHI	PAO1,WT,LB	PAO1,WT,MOPS acetate	PAO1,WT,MOPS glycerol	PAO1,early stat	PAO1,ersA,BHI	PAO1,lasR rhlR,M9-CA,early stat	PAO1,lasR rhlR,M9-CA,log	PAO1,liquid culture	PAO1,mexZ,LB	PAO1,oxylipin-	PAO1,pBAD-yhjH	PAO1,pUCP18::msr(E)	PAO1,qslA,M9-CA,early stat	PAO1,qslA,M9-CA,log	PAO1,qteE,M9-CA,early stat	PAO1,qteE,M9-CA,log	PAO1,untreated	PAO1,wspFpelApslBCD,LB	PAO1,wspFpelApslBCD,LB,untreated	Y31,LB	Y71,LB	Y82,LB	Y89,LB	ciproflaxin	liquid culture	m pheno	mexT	nirS	pHerdB20T-gp68	untreated
CRN82363 (virS_2)	8.63	5.62	5.21	15.72	77.46	13.54	5.47	1.13	6.42	8.34	7.54	8.84	8.15	6.6	4.53	12.7	3.87	3.69	9.05	14.05	12.07	6.76	3.29	4.68	15.92	11.67	2.92	6.47	3.92	6.92	3.94	8.95	9.22	6.85	2.14	5.54	6.87	5.94	3.55	5.47	7.88	3.07	15.72	6.53	3.29	6.21	1.81	8.62	16.37	6.13	6.0	4.51	2.83	5.95	2.31	0.64	8.54	7.09	8.05	2.44	8.82	2.66	5.02	3.58	4.76	6.49	12.83	5.96	9.64	5.23	4.41	10.44	3.59	2.67	36.98	2.19
CRO11876 (ada_2)	9.82	6.26	7.33	18.39	73.69	9.03	6.58	2.92	11.31	8.78	6.18	5.79	5.72	5.35	3.49	9.81	2.77	1.65	10.78	7.06	22.2	4.92	7.55	9.26	9.43	10.26	3.03	12.01	2.64	25.53	4.32	9.08	13.95	3.52	2.16	6.99	3.49	4.58	3.89	2.45	15.36	2.58	17.66	3.24	2.48	6.2	1.57	5.75	9.49	3.24	4.19	9.76	2.16	2.42	1.21	0.06	4.82	3.3	18.81	2.72	16.54	2.43	2.29	1.81	3.43	4.03	14.16	6.47	7.72	4.03	5.41	10.86	1.87	4.28	39.44	2.38

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)