Heatmap: Cluster_109 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
AES-1R,ASMDM+
AG1,ciproflaxin
D+7bld
DK2
E01
LB
LB,log
LB,untreated
PA1201
PA14
PA14,0.25xMIC G3KL
PA14,0.25xMIC T7
PA14,0.25xMIC polymyxin-B
PA14,LB
PA14,LB,log
PA14,WT
PA14,ciproflaxin
PA14,cmrA+
PA14,late stat,NaPyruvate+Arabinose
PA14,late stat,untreated
PA14,sutA-KO,late stat,NaPyruvate+Arabinose
PA14,untreated
PA212
PA2596
PA558
PA580
PAK,LB
PAK,WT
PAK,WT,LB
PAK,pilR
PAK,pmrB6,LB
PAO1
PAO1,0.56mg/mL farnesol
PAO1,ABTGC
PAO1,DDS
PAO1,GUN,LB,glucose
PAO1,HapZ,early stat
PAO1,LB
PAO1,LB,glucose
PAO1,LB,untreated
PAO1,M9-CA,early stat
PAO1,M9-CA,log
PAO1,RsmN+
PAO1,SagS,early stat
PAO1,WT
PAO1,WT,BHI
PAO1,WT,LB
PAO1,WT,MOPS acetate
PAO1,WT,MOPS glycerol
PAO1,early stat
PAO1,ersA,BHI
PAO1,lasR rhlR,M9-CA,early stat
PAO1,lasR rhlR,M9-CA,log
PAO1,liquid culture
PAO1,mexZ,LB
PAO1,oxylipin-
PAO1,pBAD-yhjH
PAO1,pUCP18::msr(E)
PAO1,qslA,M9-CA,early stat
PAO1,qslA,M9-CA,log
PAO1,qteE,M9-CA,early stat
PAO1,qteE,M9-CA,log
PAO1,untreated
PAO1,wspFpelApslBCD,LB
PAO1,wspFpelApslBCD,LB,untreated
Y31,LB
Y71,LB
Y82,LB
Y89,LB
ciproflaxin
liquid culture
m pheno
mexT
nirS
pHerdB20T-gp68
untreated
CRN81542 (ecpD_2)
-1.42 1.21 -1.77 -0.37 3.51 -0.02 -1.17 1.76 -2.17 -0.23 -0.52 -0.27 0.07 0.06 -1.72 -0.97 -1.24 -1.82 -1.65 0.37 -1.57 -1.13 -1.67 -3.67 -0.61 0.43 -0.05 -0.97 -1.6 -1.53 -0.67 2.01 1.54 -1.02 -2.05 0.52 -1.93 -1.04 -0.38 -0.36 0.16 -2.37 -1.22 -2.51 -0.98 -0.81 -2.46 -0.55 -0.32 -1.92 -1.16 0.6 -2.25 -1.76 -0.86 -5.62 0.07 -2.74 -0.44 -3.47 -1.63 -2.1 -2.2 -3.52 -2.69 -0.26 0.82 -0.58 -0.05 -1.34 -1.4 1.09 -1.55 0.85 3.02 1.28
-1.24 2.34 -0.54 -2.28 1.81 -1.54 -2.78 1.65 -2.1 -0.95 0.68 0.74 1.1 -2.14 -2.21 -0.33 1.51 -1.79 -2.08 -0.49 -1.53 0.14 -2.26 -2.08 -0.95 0.02 0.26 -0.27 -1.37 -1.06 -0.75 1.98 2.65 -0.55 -1.21 -2.69 -2.62 -1.05 -3.29 -2.87 -1.28 -4.23 -2.57 -3.07 0.23 -0.01 -3.48 0.29 0.05 -2.46 -0.72 -1.07 -4.58 -0.69 -3.14 -0.75 0.59 -1.75 -2.25 -4.43 -2.76 -4.22 -1.43 -2.61 -2.63 -0.25 -0.14 -0.86 -0.38 -0.32 -2.43 1.3 -1.94 2.93 2.36 0.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.