Heatmap: Cluster_86 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	AES-1R,ASMDM+	AG1,ciproflaxin	D+7bld	DK2	E01	LB	LB,log	LB,untreated	PA1201	PA14	PA14,0.25xMIC G3KL	PA14,0.25xMIC T7	PA14,0.25xMIC polymyxin-B	PA14,LB	PA14,LB,log	PA14,WT	PA14,ciproflaxin	PA14,cmrA+	PA14,late stat,NaPyruvate+Arabinose	PA14,late stat,untreated	PA14,sutA-KO,late stat,NaPyruvate+Arabinose	PA14,untreated	PA212	PA2596	PA558	PA580	PAK,LB	PAK,WT	PAK,WT,LB	PAK,pilR	PAK,pmrB6,LB	PAO1	PAO1,0.56mg/mL farnesol	PAO1,ABTGC	PAO1,DDS	PAO1,GUN,LB,glucose	PAO1,HapZ,early stat	PAO1,LB	PAO1,LB,glucose	PAO1,LB,untreated	PAO1,M9-CA,early stat	PAO1,M9-CA,log	PAO1,RsmN+	PAO1,SagS,early stat	PAO1,WT	PAO1,WT,BHI	PAO1,WT,LB	PAO1,WT,MOPS acetate	PAO1,WT,MOPS glycerol	PAO1,early stat	PAO1,ersA,BHI	PAO1,lasR rhlR,M9-CA,early stat	PAO1,lasR rhlR,M9-CA,log	PAO1,liquid culture	PAO1,mexZ,LB	PAO1,oxylipin-	PAO1,pBAD-yhjH	PAO1,pUCP18::msr(E)	PAO1,qslA,M9-CA,early stat	PAO1,qslA,M9-CA,log	PAO1,qteE,M9-CA,early stat	PAO1,qteE,M9-CA,log	PAO1,untreated	PAO1,wspFpelApslBCD,LB	PAO1,wspFpelApslBCD,LB,untreated	Y31,LB	Y71,LB	Y82,LB	Y89,LB	ciproflaxin	liquid culture	m pheno	mexT	nirS	pHerdB20T-gp68	untreated
CRO81927 (trpC)	-0.05	-0.64	0.02	0.74	-0.27	1.63	-0.15	-0.12	-0.74	0.05	0.12	0.14	0.2	-0.25	0.18	0.44	-0.02	-0.11	-0.41	0.14	-0.62	0.12	-1.72	-0.94	0.45	0.51	0.56	0.23	-0.01	-0.16	0.83	-0.15	-0.56	0.51	-1.42	-0.61	-1.56	-0.21	-0.66	-0.9	0.1	-0.35	0.02	-1.62	-0.07	0.71	-0.62	0.34	-0.28	-1.43	0.97	0.05	-0.46	-0.08	-0.65	-1.53	1.11	-0.77	-0.31	-0.53	-0.4	-0.35	-0.91	-1.95	-1.26	0.8	1.07	1.24	1.13	0.18	0.06	-0.48	-0.14	-0.62	-0.07	-1.11
CRO81957 (trpD_1)	-0.22	-0.52	-0.44	0.66	-0.27	1.97	-0.11	-0.05	-0.5	-0.19	-0.09	-0.02	0.01	-0.0	0.01	-0.05	-1.21	-0.53	-0.82	-0.68	-1.33	-0.13	-1.29	-1.35	0.06	-0.12	0.01	-0.14	-0.42	-0.47	0.48	0.01	-0.8	0.5	-1.76	-0.24	-0.03	-0.52	0.04	0.17	-0.29	-0.49	0.41	-0.12	-0.21	1.19	0.05	0.18	-0.22	-0.02	1.51	-0.47	-0.78	-0.5	0.24	-3.29	0.58	-0.42	-0.74	-0.87	-0.68	-0.68	-0.67	-1.78	-0.54	0.77	1.17	1.38	1.3	-0.42	0.21	-0.44	-0.52	0.46	-0.15	-0.2
CRO81989 (trpG)	-0.26	-0.37	-0.45	0.2	0.24	1.47	0.12	0.99	-1.16	0.19	0.45	0.43	0.44	0.42	0.2	0.11	0.67	-0.35	-0.67	0.71	-0.47	0.28	-0.74	-1.04	0.12	-0.12	0.36	0.46	0.54	-0.51	0.85	-0.18	-1.29	-0.48	-1.32	-0.79	-2.81	-0.9	-0.85	-0.93	-0.74	-0.35	-1.07	-2.9	0.06	-0.39	-0.21	0.13	-0.28	-2.45	0.36	-0.95	-0.33	-0.43	-0.26	-2.75	0.69	-1.46	-1.71	-0.32	-1.74	-0.25	-1.5	-2.66	-2.34	1.41	1.29	1.92	1.32	1.09	-0.62	-0.4	-0.53	-0.15	0.17	0.67

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.