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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | AES-1R,ASMDM+ | AG1,ciproflaxin | D+7bld | DK2 | E01 | LB | LB,log | LB,untreated | PA1201 | PA14 | PA14,0.25xMIC G3KL | PA14,0.25xMIC T7 | PA14,0.25xMIC polymyxin-B | PA14,LB | PA14,LB,log | PA14,WT | PA14,ciproflaxin | PA14,cmrA+ | PA14,late stat,NaPyruvate+Arabinose | PA14,late stat,untreated | PA14,sutA-KO,late stat,NaPyruvate+Arabinose | PA14,untreated | PA212 | PA2596 | PA558 | PA580 | PAK,LB | PAK,WT | PAK,WT,LB | PAK,pilR | PAK,pmrB6,LB | PAO1 | PAO1,0.56mg/mL farnesol | PAO1,ABTGC | PAO1,DDS | PAO1,GUN,LB,glucose | PAO1,HapZ,early stat | PAO1,LB | PAO1,LB,glucose | PAO1,LB,untreated | PAO1,M9-CA,early stat | PAO1,M9-CA,log | PAO1,RsmN+ | PAO1,SagS,early stat | PAO1,WT | PAO1,WT,BHI | PAO1,WT,LB | PAO1,WT,MOPS acetate | PAO1,WT,MOPS glycerol | PAO1,early stat | PAO1,ersA,BHI | PAO1,lasR rhlR,M9-CA,early stat | PAO1,lasR rhlR,M9-CA,log | PAO1,liquid culture | PAO1,mexZ,LB | PAO1,oxylipin- | PAO1,pBAD-yhjH | PAO1,pUCP18::msr(E) | PAO1,qslA,M9-CA,early stat | PAO1,qslA,M9-CA,log | PAO1,qteE,M9-CA,early stat | PAO1,qteE,M9-CA,log | PAO1,untreated | PAO1,wspFpelApslBCD,LB | PAO1,wspFpelApslBCD,LB,untreated | Y31,LB | Y71,LB | Y82,LB | Y89,LB | ciproflaxin | liquid culture | m pheno | mexT | nirS | pHerdB20T-gp68 | untreated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CRO28769 (poxB) | -0.55 | -0.77 | -0.57 | -0.16 | 1.64 | -0.44 | -0.1 | -0.34 | 1.61 | 0.21 | 0.82 | 0.72 | 0.73 | 0.09 | -1.85 | 1.7 | 0.43 | -1.58 | -0.81 | -0.47 | -0.59 | 0.77 | -1.55 | 0.13 | 0.26 | -0.42 | -0.92 | -0.15 | -1.71 | -0.16 | -1.09 | -0.1 | -0.37 | 0.05 | -1.78 | 0.56 | -0.83 | -0.3 | -0.6 | -0.96 | -2.27 | -1.13 | 0.73 | -1.35 | 0.36 | -0.41 | -1.3 | -1.75 | 0.14 | -1.0 | -0.93 | -2.34 | -1.19 | -0.3 | -1.07 | -3.39 | -0.54 | 1.13 | -1.11 | -1.4 | -1.03 | -1.17 | 0.09 | -1.61 | -1.37 | 1.24 | 1.63 | 1.03 | 0.97 | -0.74 | -0.89 | 1.73 | -1.56 | 0.66 | 1.43 | -1.95 |
| 1.01 | -0.57 | -0.18 | 1.56 | 1.23 | 0.49 | 0.69 | -0.36 | -0.63 | 0.4 | 0.35 | 0.39 | 0.37 | 0.39 | -0.1 | 1.01 | -0.79 | -0.91 | -0.01 | 0.74 | 0.13 | 0.24 | -1.53 | -0.1 | 0.82 | 0.51 | 0.13 | -0.53 | -2.1 | -0.37 | 0.36 | -0.24 | -0.54 | -0.49 | -1.2 | 0.33 | 1.12 | -0.49 | -0.44 | -0.79 | -1.39 | -1.46 | -0.05 | 0.17 | -0.48 | -0.43 | -1.0 | -1.29 | 0.53 | 1.07 | -0.64 | -1.59 | -1.5 | -0.71 | -0.9 | -2.16 | -0.14 | -0.44 | -1.33 | -1.67 | -1.33 | -1.52 | -0.38 | -2.02 | -1.04 | 1.18 | 1.29 | 0.86 | 0.82 | -0.58 | -0.81 | 0.56 | -0.9 | -0.79 | 0.89 | -1.06 | |
| 1.53 | -0.51 | -0.17 | 0.95 | 0.86 | -0.14 | 0.65 | -0.36 | 0.35 | 0.41 | 0.81 | 0.75 | 0.51 | 0.27 | -1.31 | 2.6 | -0.74 | -2.17 | -0.55 | -0.62 | -0.24 | 0.63 | -1.07 | 0.04 | 0.91 | 0.1 | -0.96 | 0.31 | -2.22 | 0.01 | -0.83 | 0.05 | -0.26 | -0.16 | -1.33 | 0.81 | -0.52 | -0.6 | -0.28 | -0.37 | -0.93 | -2.93 | 0.27 | -0.87 | 0.07 | -0.61 | -1.46 | -0.98 | -0.0 | -0.29 | -0.69 | -1.5 | -2.66 | -1.2 | -1.72 | -1.59 | -0.49 | 0.61 | 0.05 | -2.95 | 0.01 | -2.35 | 0.05 | -1.29 | -0.92 | 0.74 | 1.21 | 0.53 | 0.38 | -0.34 | -0.52 | 0.8 | -2.02 | -0.37 | 0.98 | -1.24 | |
CRP72395 (bla) | 1.09 | -1.26 | -0.79 | 0.22 | 0.34 | 0.4 | 0.91 | -0.24 | -0.99 | 0.8 | 1.25 | 1.24 | 1.19 | 1.63 | 0.06 | 0.93 | -0.44 | -0.54 | -0.59 | 0.61 | -0.32 | 1.02 | -1.29 | 0.27 | 0.49 | 0.0 | -0.05 | 0.34 | -0.95 | -1.07 | -0.01 | -0.5 | -0.31 | -0.76 | -1.81 | 0.18 | -1.95 | -1.19 | -0.42 | -0.48 | -2.05 | -2.15 | -1.28 | -3.06 | 0.03 | -0.24 | -0.33 | -1.61 | -0.67 | -2.11 | -0.08 | -2.08 | -2.24 | -0.37 | -0.51 | -2.67 | -0.03 | -1.76 | -2.11 | -2.23 | -2.25 | -2.17 | -1.53 | -2.91 | -2.13 | 1.11 | 2.31 | 1.12 | 1.67 | -0.44 | -0.64 | 1.11 | -0.23 | -0.9 | 0.9 | -0.41 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.