Heatmap: Cluster_117 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Transpose table Download table

Gene	AES-1R,ASMDM+	AG1,ciproflaxin	D+7bld	DK2	E01	LB	LB,log	LB,untreated	PA1201	PA14	PA14,0.25xMIC G3KL	PA14,0.25xMIC T7	PA14,0.25xMIC polymyxin-B	PA14,LB	PA14,LB,log	PA14,WT	PA14,ciproflaxin	PA14,cmrA+	PA14,late stat,NaPyruvate+Arabinose	PA14,late stat,untreated	PA14,sutA-KO,late stat,NaPyruvate+Arabinose	PA14,untreated	PA212	PA2596	PA558	PA580	PAK,LB	PAK,WT	PAK,WT,LB	PAK,pilR	PAK,pmrB6,LB	PAO1	PAO1,0.56mg/mL farnesol	PAO1,ABTGC	PAO1,DDS	PAO1,GUN,LB,glucose	PAO1,HapZ,early stat	PAO1,LB	PAO1,LB,glucose	PAO1,LB,untreated	PAO1,M9-CA,early stat	PAO1,M9-CA,log	PAO1,RsmN+	PAO1,SagS,early stat	PAO1,WT	PAO1,WT,BHI	PAO1,WT,LB	PAO1,WT,MOPS acetate	PAO1,WT,MOPS glycerol	PAO1,early stat	PAO1,ersA,BHI	PAO1,lasR rhlR,M9-CA,early stat	PAO1,lasR rhlR,M9-CA,log	PAO1,liquid culture	PAO1,mexZ,LB	PAO1,oxylipin-	PAO1,pBAD-yhjH	PAO1,pUCP18::msr(E)	PAO1,qslA,M9-CA,early stat	PAO1,qslA,M9-CA,log	PAO1,qteE,M9-CA,early stat	PAO1,qteE,M9-CA,log	PAO1,untreated	PAO1,wspFpelApslBCD,LB	PAO1,wspFpelApslBCD,LB,untreated	Y31,LB	Y71,LB	Y82,LB	Y89,LB	ciproflaxin	liquid culture	m pheno	mexT	nirS	pHerdB20T-gp68	untreated
CRP13013	135.59	42.86	47.24	72.87	58.96	62.83	40.48	24.28	86.5	41.29	46.08	42.89	38.79	43.9	23.99	56.32	11.09	11.44	21.18	28.02	22.26	34.23	17.32	70.87	84.59	41.44	49.02	56.28	24.87	54.11	57.18	42.22	46.68	35.77	12.72	24.3	114.43	26.01	23.0	14.54	40.58	11.57	69.97	58.93	32.11	41.97	9.1	86.05	101.16	97.72	46.68	44.2	14.46	33.98	9.92	5.24	45.83	46.89	38.25	11.96	39.41	11.5	52.89	19.18	26.96	49.0	55.27	56.32	50.71	36.73	49.84	42.99	10.35	55.93	60.71	29.25
CRP13039 (ypeA)	169.33	60.89	73.54	132.77	117.43	94.84	56.98	94.04	82.91	62.35	98.04	104.49	94.5	99.14	76.14	69.39	20.33	25.35	48.79	182.13	53.52	83.76	56.78	88.48	220.54	130.53	109.66	143.67	70.72	144.74	133.49	83.69	93.11	49.6	55.32	98.49	218.71	28.18	74.5	74.43	23.77	7.14	106.07	106.1	57.71	104.39	61.76	132.56	145.12	209.08	166.87	20.56	7.81	41.94	70.92	8.35	72.77	67.67	20.87	6.38	22.14	7.45	80.87	39.81	63.01	138.84	117.69	113.1	120.25	88.44	94.95	65.58	24.5	121.44	85.07	108.29

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)