Heatmap: Cluster_98 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
AES-1R,ASMDM+
AG1,ciproflaxin
D+7bld
DK2
E01
LB
LB,log
LB,untreated
PA1201
PA14
PA14,0.25xMIC G3KL
PA14,0.25xMIC T7
PA14,0.25xMIC polymyxin-B
PA14,LB
PA14,LB,log
PA14,WT
PA14,ciproflaxin
PA14,cmrA+
PA14,late stat,NaPyruvate+Arabinose
PA14,late stat,untreated
PA14,sutA-KO,late stat,NaPyruvate+Arabinose
PA14,untreated
PA212
PA2596
PA558
PA580
PAK,LB
PAK,WT
PAK,WT,LB
PAK,pilR
PAK,pmrB6,LB
PAO1
PAO1,0.56mg/mL farnesol
PAO1,ABTGC
PAO1,DDS
PAO1,GUN,LB,glucose
PAO1,HapZ,early stat
PAO1,LB
PAO1,LB,glucose
PAO1,LB,untreated
PAO1,M9-CA,early stat
PAO1,M9-CA,log
PAO1,RsmN+
PAO1,SagS,early stat
PAO1,WT
PAO1,WT,BHI
PAO1,WT,LB
PAO1,WT,MOPS acetate
PAO1,WT,MOPS glycerol
PAO1,early stat
PAO1,ersA,BHI
PAO1,lasR rhlR,M9-CA,early stat
PAO1,lasR rhlR,M9-CA,log
PAO1,liquid culture
PAO1,mexZ,LB
PAO1,oxylipin-
PAO1,pBAD-yhjH
PAO1,pUCP18::msr(E)
PAO1,qslA,M9-CA,early stat
PAO1,qslA,M9-CA,log
PAO1,qteE,M9-CA,early stat
PAO1,qteE,M9-CA,log
PAO1,untreated
PAO1,wspFpelApslBCD,LB
PAO1,wspFpelApslBCD,LB,untreated
Y31,LB
Y71,LB
Y82,LB
Y89,LB
ciproflaxin
liquid culture
m pheno
mexT
nirS
pHerdB20T-gp68
untreated
CRP32635 (czcS_2)
21.88 4.5 10.38 17.2 57.53 23.17 23.97 5.22 3.16 11.63 13.51 13.18 11.93 13.55 10.93 12.42 8.22 5.33 13.23 59.34 14.18 11.3 5.68 4.44 15.82 22.73 7.15 5.89 5.11 4.74 9.36 12.32 12.64 10.85 6.84 20.18 3.32 9.13 15.25 17.83 5.3 4.44 9.49 3.06 22.52 19.45 9.13 8.85 13.8 3.77 16.06 5.06 4.95 11.57 6.72 0.54 13.78 4.33 4.92 3.21 4.62 5.0 5.02 2.33 4.46 27.43 29.24 19.54 21.77 8.67 8.27 11.52 4.88 12.92 36.15 7.97
CRP32770 (czcA_3)
6.29 3.86 3.18 6.5 40.83 10.8 3.4 1.99 2.28 6.18 3.01 3.19 3.53 7.45 2.04 5.2 1.88 1.32 5.76 24.24 6.2 2.68 3.23 2.9 6.71 8.11 1.58 2.99 1.92 3.2 2.25 5.94 4.84 4.43 2.01 11.25 4.39 3.94 6.33 6.9 2.14 0.6 5.23 3.52 8.68 9.15 3.07 2.11 5.68 4.53 4.59 1.83 0.67 4.15 3.26 1.07 4.45 2.04 1.92 0.84 1.69 0.76 2.43 1.21 1.88 4.3 16.1 5.21 7.55 2.48 3.5 4.56 1.35 5.88 21.92 1.5

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)