Heatmap: Cluster_90 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
AES-1R,ASMDM+
AG1,ciproflaxin
D+7bld
DK2
E01
LB
LB,log
LB,untreated
PA1201
PA14
PA14,0.25xMIC G3KL
PA14,0.25xMIC T7
PA14,0.25xMIC polymyxin-B
PA14,LB
PA14,LB,log
PA14,WT
PA14,ciproflaxin
PA14,cmrA+
PA14,late stat,NaPyruvate+Arabinose
PA14,late stat,untreated
PA14,sutA-KO,late stat,NaPyruvate+Arabinose
PA14,untreated
PA212
PA2596
PA558
PA580
PAK,LB
PAK,WT
PAK,WT,LB
PAK,pilR
PAK,pmrB6,LB
PAO1
PAO1,0.56mg/mL farnesol
PAO1,ABTGC
PAO1,DDS
PAO1,GUN,LB,glucose
PAO1,HapZ,early stat
PAO1,LB
PAO1,LB,glucose
PAO1,LB,untreated
PAO1,M9-CA,early stat
PAO1,M9-CA,log
PAO1,RsmN+
PAO1,SagS,early stat
PAO1,WT
PAO1,WT,BHI
PAO1,WT,LB
PAO1,WT,MOPS acetate
PAO1,WT,MOPS glycerol
PAO1,early stat
PAO1,ersA,BHI
PAO1,lasR rhlR,M9-CA,early stat
PAO1,lasR rhlR,M9-CA,log
PAO1,liquid culture
PAO1,mexZ,LB
PAO1,oxylipin-
PAO1,pBAD-yhjH
PAO1,pUCP18::msr(E)
PAO1,qslA,M9-CA,early stat
PAO1,qslA,M9-CA,log
PAO1,qteE,M9-CA,early stat
PAO1,qteE,M9-CA,log
PAO1,untreated
PAO1,wspFpelApslBCD,LB
PAO1,wspFpelApslBCD,LB,untreated
Y31,LB
Y71,LB
Y82,LB
Y89,LB
ciproflaxin
liquid culture
m pheno
mexT
nirS
pHerdB20T-gp68
untreated
CRP02742 (puuB_6)
16.11 10.53 5.13 13.98 67.28 9.95 6.95 6.76 11.92 12.5 9.63 11.66 11.02 8.38 3.8 10.1 3.61 3.36 9.06 20.39 10.71 9.0 7.0 12.17 9.58 8.71 8.54 17.0 3.56 18.06 15.74 8.27 25.11 7.22 2.53 11.16 3.99 3.28 7.79 7.07 11.72 3.41 12.28 3.34 4.45 8.39 2.28 4.37 8.11 3.83 7.01 8.53 3.25 7.15 2.63 0.52 8.86 3.33 8.23 2.67 9.38 3.18 2.58 0.86 2.63 11.84 18.74 13.24 17.02 5.11 6.12 10.65 3.23 5.76 60.23 2.24
46.12 17.18 13.63 73.25 180.62 29.93 19.09 35.93 69.46 39.24 38.66 39.77 36.15 31.65 15.1 34.39 18.52 6.39 47.34 92.24 59.44 31.47 19.14 48.64 35.28 23.83 21.57 76.62 10.66 84.61 28.94 27.06 37.86 26.49 5.25 27.54 16.84 12.31 29.17 16.14 31.33 4.4 53.75 19.71 14.08 23.12 1.88 23.64 29.04 12.01 13.49 25.31 5.06 16.49 3.3 10.22 27.6 19.13 32.29 3.26 28.73 4.64 15.62 7.03 20.29 23.31 26.76 20.39 27.18 13.18 19.92 28.85 7.29 44.31 182.12 14.11

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)