Heatmap: Cluster_106 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	AES-1R,ASMDM+	AG1,ciproflaxin	D+7bld	DK2	E01	LB	LB,log	LB,untreated	PA1201	PA14	PA14,0.25xMIC G3KL	PA14,0.25xMIC T7	PA14,0.25xMIC polymyxin-B	PA14,LB	PA14,LB,log	PA14,WT	PA14,ciproflaxin	PA14,cmrA+	PA14,late stat,NaPyruvate+Arabinose	PA14,late stat,untreated	PA14,sutA-KO,late stat,NaPyruvate+Arabinose	PA14,untreated	PA212	PA2596	PA558	PA580	PAK,LB	PAK,WT	PAK,WT,LB	PAK,pilR	PAK,pmrB6,LB	PAO1	PAO1,0.56mg/mL farnesol	PAO1,ABTGC	PAO1,DDS	PAO1,GUN,LB,glucose	PAO1,HapZ,early stat	PAO1,LB	PAO1,LB,glucose	PAO1,LB,untreated	PAO1,M9-CA,early stat	PAO1,M9-CA,log	PAO1,RsmN+	PAO1,SagS,early stat	PAO1,WT	PAO1,WT,BHI	PAO1,WT,LB	PAO1,WT,MOPS acetate	PAO1,WT,MOPS glycerol	PAO1,early stat	PAO1,ersA,BHI	PAO1,lasR rhlR,M9-CA,early stat	PAO1,lasR rhlR,M9-CA,log	PAO1,liquid culture	PAO1,mexZ,LB	PAO1,oxylipin-	PAO1,pBAD-yhjH	PAO1,pUCP18::msr(E)	PAO1,qslA,M9-CA,early stat	PAO1,qslA,M9-CA,log	PAO1,qteE,M9-CA,early stat	PAO1,qteE,M9-CA,log	PAO1,untreated	PAO1,wspFpelApslBCD,LB	PAO1,wspFpelApslBCD,LB,untreated	Y31,LB	Y71,LB	Y82,LB	Y89,LB	ciproflaxin	liquid culture	m pheno	mexT	nirS	pHerdB20T-gp68	untreated
CRO53395 (gcvA_6)	-0.48	-0.29	-0.82	0.58	1.7	0.65	-0.28	-0.28	-0.91	0.08	0.39	0.39	0.33	0.68	-0.34	-0.05	0.23	-1.24	0.68	0.28	0.78	0.01	-0.94	-0.56	0.66	-0.0	-1.51	0.68	-0.98	0.78	-1.04	0.3	-0.69	-0.01	-1.89	0.91	-0.16	-0.83	-0.35	-0.31	-0.29	-1.66	0.41	-0.1	0.1	0.37	-1.32	-0.1	0.68	-0.04	0.08	-0.67	-1.79	0.49	-0.98	-0.94	0.1	-0.19	-0.28	-1.88	-0.36	-1.72	-0.47	-1.21	-1.23	-0.04	0.79	-0.16	0.13	0.34	0.09	0.44	-0.95	0.02	1.74	-1.08
CRP13226 (hxuA_3)	0.42	-0.28	-0.06	0.75	1.33	0.73	-0.19	-1.36	-1.52	0.27	0.25	0.29	0.37	0.55	-0.45	0.39	-0.14	-0.61	0.09	1.04	0.48	0.07	-0.85	0.04	0.42	0.4	-0.81	0.51	-1.15	0.59	-0.55	0.24	0.55	0.06	-1.45	0.53	0.54	-0.66	-0.3	-0.3	-1.09	-2.34	0.62	0.36	0.59	0.23	-0.21	-0.38	0.59	0.55	0.3	-1.25	-2.03	-0.71	-0.42	-2.01	-0.2	0.11	-1.08	-2.25	-1.17	-2.17	-0.04	-0.6	-0.19	0.24	0.92	0.13	0.01	0.06	-0.74	-0.41	-0.54	0.03	1.04	-1.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.