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Heatmap: Cluster_116 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
AES-1R,ASMDM+
AG1,ciproflaxin
D+7bld
DK2
E01
LB
LB,log
LB,untreated
PA1201
PA14
PA14,0.25xMIC G3KL
PA14,0.25xMIC T7
PA14,0.25xMIC polymyxin-B
PA14,LB
PA14,LB,log
PA14,WT
PA14,ciproflaxin
PA14,cmrA+
PA14,late stat,NaPyruvate+Arabinose
PA14,late stat,untreated
PA14,sutA-KO,late stat,NaPyruvate+Arabinose
PA14,untreated
PA212
PA2596
PA558
PA580
PAK,LB
PAK,WT
PAK,WT,LB
PAK,pilR
PAK,pmrB6,LB
PAO1
PAO1,0.56mg/mL farnesol
PAO1,ABTGC
PAO1,DDS
PAO1,GUN,LB,glucose
PAO1,HapZ,early stat
PAO1,LB
PAO1,LB,glucose
PAO1,LB,untreated
PAO1,M9-CA,early stat
PAO1,M9-CA,log
PAO1,RsmN+
PAO1,SagS,early stat
PAO1,WT
PAO1,WT,BHI
PAO1,WT,LB
PAO1,WT,MOPS acetate
PAO1,WT,MOPS glycerol
PAO1,early stat
PAO1,ersA,BHI
PAO1,lasR rhlR,M9-CA,early stat
PAO1,lasR rhlR,M9-CA,log
PAO1,liquid culture
PAO1,mexZ,LB
PAO1,oxylipin-
PAO1,pBAD-yhjH
PAO1,pUCP18::msr(E)
PAO1,qslA,M9-CA,early stat
PAO1,qslA,M9-CA,log
PAO1,qteE,M9-CA,early stat
PAO1,qteE,M9-CA,log
PAO1,untreated
PAO1,wspFpelApslBCD,LB
PAO1,wspFpelApslBCD,LB,untreated
Y31,LB
Y71,LB
Y82,LB
Y89,LB
ciproflaxin
liquid culture
m pheno
mexT
nirS
pHerdB20T-gp68
untreated
321.8 611.6 509.39 173.13 249.27 346.3 195.81 418.51 411.5 317.17 359.05 389.26 401.05 268.36 362.13 314.85 844.45 433.06 105.1 289.72 136.7 418.98 175.67 336.65 250.99 311.91 333.39 337.49 464.5 231.97 329.24 306.31 537.55 420.45 423.0 268.93 119.45 379.57 392.33 297.31 373.61 381.87 510.66 116.8 340.58 734.45 544.39 530.35 417.0 146.66 817.13 557.09 363.72 518.13 545.82 302.54 475.21 209.64 326.63 351.87 319.4 341.34 256.67 351.36 185.44 392.86 412.67 338.6 487.77 631.26 296.43 291.82 410.44 638.27 362.99 424.35
626.88 613.0 2006.15 372.81 95.76 1886.78 1648.06 840.6 2474.89 1878.35 1775.11 1787.19 1600.34 1417.96 2790.68 1016.66 1104.27 3510.33 506.58 657.93 576.42 1435.08 944.57 845.7 4107.66 4694.06 1287.02 1242.87 1886.92 348.34 944.44 1347.12 1013.11 1324.38 5293.12 530.72 130.65 927.91 799.91 571.84 308.27 490.05 1250.0 175.51 565.3 1192.95 1732.06 903.92 712.86 117.2 1496.46 305.96 538.13 2316.22 1727.07 789.0 1893.17 755.07 469.85 584.64 426.7 669.04 1560.89 406.25 429.89 1432.01 1396.05 2190.65 1597.36 3140.7 2267.07 1499.07 3815.37 467.78 1392.99 2082.56

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)