- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | AES-1R,ASMDM+ | AG1,ciproflaxin | D+7bld | DK2 | E01 | LB | LB,log | LB,untreated | PA1201 | PA14 | PA14,0.25xMIC G3KL | PA14,0.25xMIC T7 | PA14,0.25xMIC polymyxin-B | PA14,LB | PA14,LB,log | PA14,WT | PA14,ciproflaxin | PA14,cmrA+ | PA14,late stat,NaPyruvate+Arabinose | PA14,late stat,untreated | PA14,sutA-KO,late stat,NaPyruvate+Arabinose | PA14,untreated | PA212 | PA2596 | PA558 | PA580 | PAK,LB | PAK,WT | PAK,WT,LB | PAK,pilR | PAK,pmrB6,LB | PAO1 | PAO1,0.56mg/mL farnesol | PAO1,ABTGC | PAO1,DDS | PAO1,GUN,LB,glucose | PAO1,HapZ,early stat | PAO1,LB | PAO1,LB,glucose | PAO1,LB,untreated | PAO1,M9-CA,early stat | PAO1,M9-CA,log | PAO1,RsmN+ | PAO1,SagS,early stat | PAO1,WT | PAO1,WT,BHI | PAO1,WT,LB | PAO1,WT,MOPS acetate | PAO1,WT,MOPS glycerol | PAO1,early stat | PAO1,ersA,BHI | PAO1,lasR rhlR,M9-CA,early stat | PAO1,lasR rhlR,M9-CA,log | PAO1,liquid culture | PAO1,mexZ,LB | PAO1,oxylipin- | PAO1,pBAD-yhjH | PAO1,pUCP18::msr(E) | PAO1,qslA,M9-CA,early stat | PAO1,qslA,M9-CA,log | PAO1,qteE,M9-CA,early stat | PAO1,qteE,M9-CA,log | PAO1,untreated | PAO1,wspFpelApslBCD,LB | PAO1,wspFpelApslBCD,LB,untreated | Y31,LB | Y71,LB | Y82,LB | Y89,LB | ciproflaxin | liquid culture | m pheno | mexT | nirS | pHerdB20T-gp68 | untreated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1.38 | 0.06 | 0.18 | 0.07 | 1.2 | 0.78 | -0.39 | -1.15 | 0.78 | -0.47 | -0.48 | -0.59 | -0.51 | -1.52 | -1.25 | 0.05 | 0.41 | -1.44 | -1.25 | -0.92 | -0.83 | -0.62 | -0.4 | -1.02 | 0.85 | 0.36 | -1.03 | 0.63 | -0.92 | 0.71 | -0.72 | 0.05 | 0.4 | 0.35 | -1.1 | -0.54 | -0.62 | -0.62 | -1.06 | -0.7 | 0.6 | -0.64 | 0.13 | -0.87 | -0.32 | 0.23 | -1.59 | 0.52 | 0.82 | -0.66 | 0.12 | 0.12 | -0.79 | 0.74 | -1.68 | 0.89 | 0.75 | -0.79 | 0.59 | -1.16 | 0.32 | -0.64 | -0.97 | -1.37 | -1.38 | 0.6 | 1.06 | 0.41 | 0.78 | 0.53 | -0.57 | -0.17 | -1.46 | 0.14 | 1.61 | -1.48 | |
CRO95105 (ydaF_2) | 1.34 | -0.31 | 0.22 | -0.15 | 0.88 | -0.32 | -0.87 | -0.21 | -0.56 | 0.34 | 0.64 | 0.74 | 0.65 | -1.73 | -1.52 | 0.56 | 0.58 | -0.77 | -0.27 | -0.08 | 0.01 | 0.26 | -0.71 | -0.52 | 0.54 | 0.46 | -0.48 | -0.66 | -0.85 | -0.38 | -0.21 | 0.1 | 0.67 | -0.11 | -0.3 | -0.01 | -1.19 | -0.31 | -0.3 | -0.61 | -0.28 | 0.03 | -0.51 | -1.56 | -0.1 | 0.79 | -1.03 | 0.11 | 0.38 | -1.08 | 0.73 | -0.77 | 0.02 | 0.31 | -0.79 | -3.56 | 0.49 | -0.62 | -0.46 | -0.21 | -0.56 | 0.17 | -0.74 | -1.11 | -0.77 | 0.74 | 0.89 | 0.57 | 0.88 | -0.11 | -0.34 | -0.29 | -0.82 | 1.11 | 1.02 | -0.87 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.