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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | AES-1R,ASMDM+ | AG1,ciproflaxin | D+7bld | DK2 | E01 | LB | LB,log | LB,untreated | PA1201 | PA14 | PA14,0.25xMIC G3KL | PA14,0.25xMIC T7 | PA14,0.25xMIC polymyxin-B | PA14,LB | PA14,LB,log | PA14,WT | PA14,ciproflaxin | PA14,cmrA+ | PA14,late stat,NaPyruvate+Arabinose | PA14,late stat,untreated | PA14,sutA-KO,late stat,NaPyruvate+Arabinose | PA14,untreated | PA212 | PA2596 | PA558 | PA580 | PAK,LB | PAK,WT | PAK,WT,LB | PAK,pilR | PAK,pmrB6,LB | PAO1 | PAO1,0.56mg/mL farnesol | PAO1,ABTGC | PAO1,DDS | PAO1,GUN,LB,glucose | PAO1,HapZ,early stat | PAO1,LB | PAO1,LB,glucose | PAO1,LB,untreated | PAO1,M9-CA,early stat | PAO1,M9-CA,log | PAO1,RsmN+ | PAO1,SagS,early stat | PAO1,WT | PAO1,WT,BHI | PAO1,WT,LB | PAO1,WT,MOPS acetate | PAO1,WT,MOPS glycerol | PAO1,early stat | PAO1,ersA,BHI | PAO1,lasR rhlR,M9-CA,early stat | PAO1,lasR rhlR,M9-CA,log | PAO1,liquid culture | PAO1,mexZ,LB | PAO1,oxylipin- | PAO1,pBAD-yhjH | PAO1,pUCP18::msr(E) | PAO1,qslA,M9-CA,early stat | PAO1,qslA,M9-CA,log | PAO1,qteE,M9-CA,early stat | PAO1,qteE,M9-CA,log | PAO1,untreated | PAO1,wspFpelApslBCD,LB | PAO1,wspFpelApslBCD,LB,untreated | Y31,LB | Y71,LB | Y82,LB | Y89,LB | ciproflaxin | liquid culture | m pheno | mexT | nirS | pHerdB20T-gp68 | untreated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.06 | -0.5 | 2.47 | -0.86 | 1.07 | -0.21 | 0.36 | -1.51 | -1.47 | -0.05 | 0.16 | 0.24 | 0.05 | 0.19 | -1.66 | -0.88 | 0.98 | -2.51 | -1.48 | -1.27 | -1.19 | -0.3 | -1.07 | -1.75 | -0.14 | -0.64 | -1.84 | -0.2 | 0.15 | -1.42 | -1.4 | 0.18 | -0.35 | -0.94 | -0.21 | 0.1 | -0.64 | -0.42 | -0.29 | -0.51 | -1.09 | -1.37 | -1.31 | -1.67 | -0.64 | 2.8 | 0.7 | -1.33 | -0.79 | -0.62 | 2.45 | -0.73 | -1.21 | 1.39 | 0.45 | -1.94 | -0.93 | -0.78 | -0.6 | -1.39 | -0.92 | -1.36 | -0.01 | 0.11 | -1.06 | -0.01 | 1.35 | -0.13 | 0.27 | 0.27 | 0.03 | -0.63 | -2.33 | -0.22 | 0.41 | -1.21 | |
CRP72546 (glnA_2) | -0.27 | -1.33 | 1.8 | -0.21 | 1.61 | -0.77 | 0.26 | -1.82 | -2.01 | 0.08 | 0.31 | 0.35 | -0.02 | -0.33 | -2.41 | -1.01 | 2.64 | -2.37 | -1.52 | -1.09 | -1.33 | -0.28 | -1.76 | -3.34 | -0.17 | -0.19 | -2.38 | -0.18 | 1.27 | -2.6 | -1.92 | 0.09 | -1.02 | -0.61 | -0.12 | -0.53 | -2.23 | -0.29 | -1.0 | -1.65 | -1.04 | -1.73 | -1.88 | -3.23 | -1.34 | 2.32 | -0.18 | -1.36 | -0.96 | -2.19 | 2.05 | -1.53 | -1.77 | 2.57 | 0.02 | -3.82 | -0.07 | -1.32 | -0.67 | -1.82 | -1.2 | -1.72 | -0.27 | -1.24 | -2.78 | 0.75 | 1.44 | 0.52 | 0.99 | 0.15 | 0.43 | -0.72 | -2.26 | -2.06 | 1.28 | -1.79 |
CRP72576 (rutB) | 0.27 | -1.47 | 1.08 | -0.52 | 0.6 | -0.98 | 1.06 | -0.41 | -1.92 | 0.32 | 0.2 | 0.29 | 0.03 | 0.33 | -2.3 | -2.15 | 2.63 | -2.66 | -2.39 | -2.28 | -2.13 | -0.18 | -2.51 | -3.71 | -1.3 | -0.86 | -1.54 | -0.25 | 1.72 | -2.51 | -0.97 | 0.48 | -2.03 | -0.62 | -0.06 | 1.07 | -2.69 | -0.21 | 0.57 | 0.25 | -1.5 | -1.9 | -2.66 | -3.13 | -0.65 | 1.48 | 0.17 | -1.44 | -1.46 | -2.87 | 1.36 | -1.63 | -1.75 | 2.4 | 0.39 | -0.76 | -0.19 | -0.24 | -0.96 | -2.24 | -1.39 | -1.95 | 0.95 | -0.35 | -2.46 | 0.71 | 1.45 | 0.57 | 1.05 | 0.79 | 1.21 | -1.23 | -2.82 | -2.61 | -0.6 | -0.25 |
CRP72604 (rpiR) | -0.81 | -1.91 | 1.48 | -0.31 | 1.48 | -0.34 | 0.51 | -0.58 | -2.34 | -0.04 | -0.22 | -0.2 | -0.59 | 0.48 | -3.0 | -2.54 | 2.49 | -2.89 | -2.37 | -1.74 | -2.47 | -0.54 | -1.46 | -4.8 | 0.25 | 0.33 | -1.4 | 0.58 | 1.51 | -2.49 | -0.99 | 0.22 | -1.88 | -0.94 | 0.8 | -0.69 | -1.85 | -0.61 | -1.16 | -0.99 | -2.04 | -2.93 | -2.2 | -2.14 | -0.25 | 0.44 | 0.21 | -1.5 | -1.02 | -2.1 | 0.73 | -2.55 | -2.65 | 2.54 | 0.16 | -2.68 | -0.04 | -1.17 | -1.46 | -2.69 | -2.12 | -2.29 | 0.2 | -1.37 | -3.25 | 1.43 | 2.21 | 1.08 | 1.4 | 1.86 | 0.19 | -1.29 | -3.0 | -0.58 | 1.23 | -1.44 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.