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Heatmap: Cluster_36 (HCCA)

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(Showing raw values)

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Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL16916 (recF)
 21.71 4.76 31.18 15.09 26.8 82.74 207.75 7.14 13.07 249.8 245.64 237.0 254.93 45.61 9.04 269.74 65.57 20.03 138.9 42.8 19.25 49.67 118.99 57.8 140.85 16.73 16.76 115.76 223.62
CCL17004 (BN171_1070006)
 73.34 45.02 71.31 24.48 105.08 43.16 92.8 164.77 139.16 167.77 212.42 196.51 206.67 63.39 28.31 84.72 100.18 100.56 70.78 83.51 14.69 145.31 55.43 151.14 112.75 64.47 16.9 32.64 195.97
CCL17005 (BN171_1070007)
 38.65 20.89 36.98 16.62 62.36 36.17 100.76 58.03 67.2 202.55 229.47 214.47 183.29 40.19 15.02 93.68 84.42 55.36 60.51 51.86 11.09 113.22 48.83 151.13 114.73 43.65 20.27 51.97 246.15
CCL17008 (BN171_1070010)
 0.58 0.68 0.77 0.78 0.42 12.61 294.88 0.81 140.83 281.7 198.33 193.61 301.49 1.56 0.63 105.92 40.19 0.64 88.9 0.76 1.62 25.04 165.64 22.25 9.02 0.2 37.88 77.31 225.53
CCL17016 (BN171_1080008)
 4.67 1.04 12.35 9.33 6.53 6.39 8.97 1.44 8.41 23.98 9.0 14.16 14.6 7.52 1.35 16.81 4.18 2.59 10.33 11.46 4.88 3.64 8.28 7.89 6.83 3.07 0.6 7.66 5.64
CCL17017 (BN171_1080009)
 1.73 0.7 3.09 2.51 1.81 4.06 9.13 0.88 3.1 7.81 7.65 8.83 6.26 2.06 0.76 8.28 1.48 0.97 5.35 2.5 1.24 1.36 4.12 4.16 2.96 1.17 0.64 3.82 4.06
CCL17062 (BN171_1170004)
 9.47 4.79 127.99 47.3 50.79 66.05 178.76 5.01 40.72 163.25 125.07 161.02 133.92 40.84 11.95 130.9 38.77 16.37 50.87 109.53 108.35 6.28 85.68 57.63 58.2 22.99 8.73 124.06 163.83
CCL17198 (BN171_140001)
 1.08 0.52 3.71 0.71 2.16 23.24 43.94 0.9 19.16 49.31 39.98 44.65 50.04 7.5 0.63 54.13 7.12 0.9 27.16 4.16 1.74 1.59 23.32 2.63 8.8 1.04 2.0 14.86 40.88
CCL17235 (BN171_1400007)
 37.42 27.43 38.23 22.26 26.29 25.79 129.14 23.63 145.86 103.48 69.27 96.93 108.89 39.35 17.82 92.71 50.28 30.39 26.08 47.62 26.33 58.4 32.81 35.23 46.0 26.82 48.02 41.38 61.03
CCL17277 (BN171_1430004)
 9.05 14.35 28.45 58.07 21.26 7.21 15.36 16.16 28.75 10.08 18.21 20.42 66.5 9.35 14.47 53.09 27.4 13.11 12.66 10.91 9.82 15.98 13.0 24.73 25.75 6.74 13.31 26.37 18.4
CCL17325 (BN171_1440009)
 3.45 0.79 5.67 3.19 5.06 9.23 47.96 1.1 13.39 68.74 32.81 34.03 52.29 4.89 1.51 28.43 13.85 2.98 11.82 7.11 3.22 5.65 27.27 12.87 15.07 3.24 5.14 38.94 22.45
CCL17390 (BN171_1480002)
 18.99 7.71 13.02 8.8 6.87 3.42 15.19 10.23 18.16 16.66 11.69 10.79 29.37 15.06 5.17 35.21 24.82 7.71 4.2 4.14 1.73 0.0 5.17 3.15 3.55 2.83 1.5 0.0 8.05
CCL17424 (BN171_150011)
 6.41 3.04 9.3 5.63 6.32 6.82 82.36 2.11 11.57 119.15 97.25 76.3 38.07 9.09 3.8 20.91 4.07 5.4 16.04 10.57 17.4 4.43 13.86 20.88 15.94 3.86 4.37 11.86 47.99
CCL17503 (BN171_1520021)
 16.22 37.66 16.91 34.16 15.35 43.18 147.83 12.58 86.52 163.79 149.05 135.48 90.42 18.26 45.56 85.86 50.87 20.74 63.0 27.81 50.13 40.75 44.56 42.99 56.37 11.86 49.28 44.42 142.31
CCL17593 (BN171_160009)
 0.06 0.0 0.0 0.0 0.0 0.0 1.19 0.0 0.0 0.8 0.34 1.14 0.3 0.0 0.0 0.0 0.1 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.14 1.94
CCL17600 (BN171_1600004)
 1.25 0.25 1.28 0.5 0.37 13.2 40.32 0.38 0.71 33.23 41.46 30.49 30.49 3.33 0.28 54.58 2.89 0.78 5.42 0.51 0.64 0.55 14.9 1.3 2.03 0.09 3.04 5.99 53.0
CCL17603 (BN171_1600007)
 3.5 1.22 5.22 5.71 3.81 2.52 12.93 1.0 12.37 5.69 9.22 8.12 26.93 5.1 1.8 17.33 7.75 2.35 6.72 2.87 2.55 2.31 18.06 14.82 7.3 1.15 4.45 18.49 7.44
CCL17645 (BN171_1640035)
 852.92 1122.18 46.89 35.21 17.93 114.18 16449.95 515.85 2091.58 13184.45 12630.5 14056.15 4791.44 1587.29 721.55 349.78 9786.03 577.77 529.58 228.55 283.67 36.2 129.77 509.08 304.05 22.37 175.88 97.68 16123.3
CCL17711 (cfa)
 183.69 60.59 144.44 60.74 55.45 135.46 140.92 37.49 596.68 163.89 166.26 128.53 531.9 172.92 97.81 319.88 76.51 101.63 265.33 159.05 69.89 1097.77 165.31 683.24 224.83 39.55 125.09 121.0 110.14
CCL17715 (BN171_1700002)
 9.74 12.27 15.85 20.9 17.16 17.28 39.09 8.45 20.38 43.66 32.48 39.09 35.82 13.81 16.62 24.32 15.94 14.3 21.59 15.43 24.94 32.25 27.29 40.08 24.4 9.07 19.12 26.94 25.69
CCL17760 (sigV)
 24.06 30.45 20.4 14.91 14.14 53.44 79.82 21.63 19.86 100.3 72.65 87.7 88.65 31.17 17.48 63.17 29.09 21.68 31.42 29.37 14.66 10.42 36.29 33.66 33.57 11.78 6.39 19.25 74.69
CCL17761 (BN171_1770005)
 11.18 6.77 18.1 10.36 11.84 28.45 67.3 4.59 9.96 78.3 70.46 75.34 75.53 25.35 7.12 67.06 23.43 10.9 23.69 11.99 7.89 8.96 35.05 24.3 24.94 4.54 4.86 19.82 69.64
CCL17802 (BN171_1810009)
 0.18 0.92 1.11 1.98 1.11 0.42 14.28 0.24 6.57 12.76 11.08 9.26 10.68 0.68 0.76 10.31 8.58 0.26 1.82 0.24 0.38 0.82 1.07 1.64 2.39 0.05 5.89 2.2 7.25
CCL17803 (BN171_1810010)
 0.62 0.31 2.7 2.34 1.61 3.18 19.0 0.0 5.57 12.75 12.76 12.94 8.39 2.12 0.75 8.35 3.37 0.51 2.98 0.53 1.58 0.0 4.26 2.92 4.22 1.32 3.45 2.95 6.35
CCL17855 (BN171_1840015)
 3.7 7.82 3.15 8.94 4.46 5.37 20.96 4.82 14.16 37.58 28.16 34.05 17.66 4.67 6.48 19.9 8.32 4.77 5.26 5.19 8.23 2.93 4.12 6.23 7.8 4.5 2.66 4.46 22.77
CCL17947 (BN171_1970016)
 6.16 6.46 7.23 5.26 6.7 20.04 36.71 6.93 11.1 35.67 31.39 35.52 38.57 11.19 7.1 43.35 13.36 9.43 9.32 8.73 7.98 6.71 9.07 18.81 16.53 4.07 1.27 10.02 39.68
CCL17972 (BN171_1990001)
 19.66 14.0 60.09 107.78 36.95 10.28 56.29 5.31 485.65 61.25 48.29 41.79 162.75 13.89 14.23 66.12 186.97 12.38 30.82 11.32 15.49 9.01 44.15 50.97 29.96 5.31 10.81 54.76 42.09
CCL17973 (BN171_1990002)
 18.91 11.11 68.09 222.17 68.16 2.02 17.34 4.23 91.32 20.92 15.79 15.33 58.0 17.48 16.53 13.59 47.43 9.14 11.38 8.94 19.05 1.62 15.47 9.4 7.73 5.44 3.04 18.39 18.37
CCL17974 (BN171_1990003)
 0.67 0.11 2.42 8.33 1.69 0.62 9.23 0.06 37.72 12.1 5.94 10.41 44.06 1.22 0.3 9.86 15.59 0.4 3.38 0.2 1.76 1.77 5.39 2.11 1.87 0.14 1.25 8.05 11.41
CCL17975 (BN171_1990004)
 1.35 0.88 6.56 18.96 4.97 1.68 7.01 0.14 24.56 11.95 7.88 9.32 50.32 1.93 0.9 10.32 18.01 0.49 4.14 0.84 2.29 1.84 6.73 2.82 2.61 0.22 1.52 7.43 6.33
CCL17978 (BN171_1990007)
 0.6 0.2 4.27 8.86 2.37 8.3 30.8 0.22 12.05 33.76 24.65 27.77 32.8 1.1 0.48 19.07 10.15 0.74 9.85 0.31 1.59 0.73 13.98 4.01 5.85 0.25 1.9 16.55 18.31
CCL18055 (BN171_2080001)
 0.07 0.0 0.19 0.0 0.04 5.15 33.49 0.1 1.77 36.8 38.34 27.6 25.8 0.29 0.05 20.87 3.72 0.17 8.03 0.08 0.1 0.21 9.78 2.63 3.2 0.0 0.14 15.03 38.23
CCL18107 (BN171_210043)
 1.54 1.69 14.32 14.28 13.51 1.17 147.65 1.6 22.52 383.57 277.98 127.21 133.86 11.36 5.91 110.69 104.54 11.9 30.9 0.71 1.99 0.7 19.96 47.25 56.96 0.36 16.78 13.88 257.32
CCL18186 (BN171_2140028)
 13.56 10.9 15.25 21.59 21.19 24.84 36.08 14.3 33.63 38.3 36.71 39.75 60.17 10.92 12.54 42.2 28.87 19.49 28.75 15.47 12.24 65.26 27.25 37.25 26.96 14.58 14.22 36.28 35.3
CCL18218 (BN171_2170005)
 1.15 0.15 2.5 3.64 2.02 1.24 9.21 0.1 9.29 8.71 10.93 7.13 12.9 2.5 0.35 4.96 2.71 0.62 3.31 1.27 1.18 1.03 3.73 2.63 2.21 0.3 0.72 5.42 6.23
CCL18358 (BN171_2230008)
 15.73 0.41 7.39 1.35 0.85 8.08 18.46 0.3 1.35 50.67 32.62 19.61 34.8 12.3 0.27 19.46 2.98 0.44 1.99 0.71 0.36 0.43 1.4 0.61 0.66 0.3 1.57 7.17 31.67
CCL18382 (BN171_2270005)
 0.99 0.25 4.55 1.61 2.13 12.05 25.05 0.39 9.48 48.34 35.25 37.22 36.82 2.75 0.52 31.38 18.42 1.35 9.46 0.82 1.15 0.35 18.96 9.49 21.5 0.25 4.63 9.49 28.57
CCL18458 (BN171_2350010)
 52.41 9.04 49.61 31.34 39.37 28.28 24.24 42.9 13.43 23.83 91.85 11.11 108.54 79.28 9.68 108.84 17.4 62.65 51.89 71.23 15.1 107.44 43.2 108.11 67.81 41.75 35.13 50.93 119.81
CCL18547 (BN171_2420014)
 0.56 0.31 0.15 0.38 0.0 6.84 17.2 0.37 1.72 42.48 44.0 24.96 21.17 0.69 0.18 23.46 6.85 0.48 6.04 0.47 0.17 1.6 8.64 4.75 3.27 0.14 1.82 7.34 54.25
CCL18640 (BN171_2480015)
 31.09 4.62 45.56 16.02 23.48 27.5 53.14 6.47 17.59 54.85 56.29 43.21 75.69 41.27 9.19 104.48 37.87 12.86 22.33 88.27 19.89 23.14 24.6 41.78 55.79 15.28 16.88 46.76 53.51
CCL18695 (BN171_2520002)
 1.77 1.69 11.25 13.56 7.2 11.84 17.56 0.9 30.72 19.19 15.64 14.42 23.08 3.93 6.33 8.17 11.41 3.33 12.47 1.68 1.38 12.6 15.04 10.18 8.24 1.34 8.62 0.0 7.28
CCL18764 (BN171_2610004)
 3.52 1.05 3.78 2.4 4.2 7.52 16.61 2.09 7.6 30.82 23.19 25.37 13.94 4.29 2.11 25.74 7.45 4.6 4.84 5.21 2.32 3.06 5.12 8.11 8.96 3.52 1.03 4.42 20.96
CCL18847 (recO)
 12.42 9.87 11.72 7.09 4.9 43.37 168.97 6.22 13.45 141.91 117.74 111.72 126.34 16.57 6.18 88.57 35.97 6.66 50.96 12.85 9.64 5.98 82.7 31.89 46.0 5.05 59.17 103.99 117.98
CCL18852 (BN171_2690009)
 13.54 12.56 8.18 9.75 6.67 21.35 112.43 10.41 35.07 83.71 85.8 72.63 82.61 10.28 13.42 79.89 26.43 16.51 34.18 10.55 11.1 53.51 43.54 59.58 69.81 9.93 22.96 65.33 86.35
CCL18898 (BN171_2710003)
 0.46 0.19 1.18 0.68 1.05 6.81 9.97 0.63 1.67 10.47 11.89 15.25 11.19 1.13 0.3 16.8 3.03 0.73 2.85 0.99 0.61 0.69 7.8 4.83 2.98 0.91 4.02 3.12 17.65
CCL19025 (BN171_2800004)
 12.64 15.14 18.82 48.2 18.46 4.3 16.76 4.96 44.23 12.62 10.66 8.66 38.06 10.41 12.17 15.75 12.03 7.07 8.25 15.44 26.93 15.09 15.19 10.79 7.41 5.68 9.63 13.06 6.19
CCL19026 (BN171_2810001)
 0.16 0.17 0.29 0.34 0.19 1.11 12.87 0.15 1.83 17.74 14.02 10.22 6.45 0.38 0.34 5.68 3.27 0.17 2.83 0.4 1.06 0.39 3.5 1.46 1.45 0.3 0.83 5.63 10.19
CCL19074 (BN171_2870004)
 481.15 826.52 651.74 816.54 601.72 657.47 426.01 439.03 243.18 541.28 667.08 1115.33 2218.11 513.79 1278.05 2347.76 600.42 788.44 180.4 755.87 740.4 452.06 29.19 400.39 1125.01 615.45 120.8 726.92 665.29
CCL19137 (BN171_2880004)
 17.99 19.08 22.37 25.98 25.15 40.54 28.93 20.34 50.17 30.48 32.39 29.82 84.41 20.05 23.8 58.86 20.33 22.64 23.19 44.29 17.0 8.14 45.91 85.25 40.33 28.27 27.64 27.08 24.02
CCL19319 (BN171_3020031)
 24.31 7.64 31.38 44.29 27.77 29.2 40.34 20.61 89.39 33.16 41.61 36.59 85.96 20.3 5.81 67.18 20.46 22.04 31.61 28.52 10.56 75.98 71.07 70.52 43.52 16.14 22.0 32.62 25.73
CCL19320 (BN171_3020032)
 20.08 10.23 34.63 40.52 26.77 12.13 39.43 25.92 90.08 43.16 35.71 34.69 58.76 28.79 6.69 45.5 24.01 19.25 23.09 23.06 10.02 130.51 53.49 35.12 25.17 14.39 6.21 22.19 30.16
CCL19340 (BN171_3070006)
 1.1 1.01 13.25 18.59 8.45 12.11 21.16 0.85 46.86 26.94 25.99 24.58 57.38 1.91 1.09 32.15 11.12 0.69 14.01 1.85 3.43 6.79 16.22 6.08 6.08 0.82 2.98 20.93 18.46
CCL19397 (BN171_3100003)
 20.41 7.11 21.55 7.64 9.18 20.15 62.94 12.17 22.78 38.2 38.18 36.78 50.28 20.98 8.01 63.18 13.53 16.53 23.16 46.03 11.97 36.83 26.98 42.98 25.08 18.0 19.97 15.52 24.74
CCL19493 (BN171_3180017)
 0.0 0.21 0.05 0.3 0.0 0.72 4.94 0.04 0.14 9.2 4.91 4.46 2.04 0.0 0.12 2.63 1.18 0.12 1.07 0.12 0.63 0.28 1.27 0.59 0.25 0.05 0.39 1.97 4.51
CCL19508 (BN171_3180032)
 0.4 0.0 0.0 0.0 0.39 0.0 1.99 0.0 0.0 7.23 22.59 17.03 14.03 0.4 0.0 10.29 2.98 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 20.61
CCL19540 (bglG)
 0.42 0.05 0.92 0.19 0.74 3.91 2.03 0.76 0.65 4.03 3.79 6.19 2.28 0.7 0.18 4.31 0.73 0.62 3.06 2.54 0.23 0.72 2.92 2.13 1.81 1.41 0.08 2.07 2.48
CCL19902 (BN171_3590023)
 29.09 16.47 30.96 39.52 27.77 52.07 37.97 16.69 110.24 55.72 46.61 43.2 79.16 31.35 31.17 88.94 28.37 37.33 53.1 52.64 32.47 35.15 58.35 51.8 52.66 42.24 12.95 29.27 39.67
CCL19972 (BN171_3610015)
 0.83 0.04 2.1 1.64 1.25 12.57 12.93 0.39 2.72 17.9 14.16 10.04 15.8 2.37 0.6 24.9 4.26 0.99 9.07 1.41 1.33 4.65 8.7 5.61 9.31 1.16 1.47 8.93 7.26
CCL20001 (phnI)
 0.35 0.46 0.56 0.63 0.56 1.09 2.04 0.32 1.98 3.24 2.13 2.6 2.65 0.25 0.6 4.36 0.71 0.42 2.59 1.05 0.91 1.4 2.52 0.96 1.32 0.81 0.54 0.0 0.46
CCL20002 (phnH)
 0.05 0.0 0.0 0.06 0.0 0.47 1.5 0.0 1.68 1.52 1.09 1.27 1.99 0.0 0.05 2.0 0.32 0.0 1.27 0.05 0.18 0.25 1.22 0.58 0.79 0.0 0.22 0.0 0.0
CCL20003 (phnG)
 0.51 0.07 0.65 0.19 0.99 3.09 1.21 0.13 3.11 0.53 1.0 3.4 3.15 1.22 0.37 4.63 0.7 0.33 2.23 3.34 2.38 2.05 2.25 1.38 2.34 1.28 0.38 0.09 0.0
CCL20141 (BN171_3700002)
 1.1 1.12 2.03 3.83 1.55 15.22 45.09 0.68 0.69 61.64 65.0 105.52 85.69 2.59 1.1 44.05 11.74 1.24 22.22 0.36 0.59 0.87 26.02 2.1 3.3 0.15 2.33 37.25 117.38
CCL20272 (BN171_3990001)
 0.16 0.0 0.86 1.08 0.25 0.0 1.67 0.13 6.82 0.28 4.24 3.33 2.66 0.21 0.28 1.13 1.08 0.19 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.88
CCL20622 (BN171_750006)
 25.73 3.07 34.33 23.42 13.34 33.61 53.11 4.22 23.95 111.25 107.3 175.66 359.44 28.08 11.84 337.43 69.22 26.76 83.22 12.67 8.19 0.0 85.24 109.24 97.48 1.2 16.71 19.47 172.81
CCL20634 (cdu)
 5.0 1.67 4.41 4.15 4.64 4.33 4.48 2.98 5.53 4.94 3.57 4.01 7.53 3.02 1.8 4.3 3.08 3.85 5.91 5.22 1.47 7.01 9.35 6.02 4.5 2.67 2.04 0.0 1.96
CCL20710 (BN171_960002)
 5.97 2.29 9.89 6.93 8.0 33.77 69.74 2.72 5.1 119.63 110.21 104.14 91.27 12.02 3.1 91.42 22.07 6.6 35.82 6.29 5.56 6.45 45.71 11.35 27.93 2.95 3.7 42.18 87.78

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)