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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | AES-1R,ASMDM+ | AG1,ciproflaxin | D+7bld | DK2 | E01 | LB | LB,log | LB,untreated | PA1201 | PA14 | PA14,0.25xMIC G3KL | PA14,0.25xMIC T7 | PA14,0.25xMIC polymyxin-B | PA14,LB | PA14,LB,log | PA14,WT | PA14,ciproflaxin | PA14,cmrA+ | PA14,late stat,NaPyruvate+Arabinose | PA14,late stat,untreated | PA14,sutA-KO,late stat,NaPyruvate+Arabinose | PA14,untreated | PA212 | PA2596 | PA558 | PA580 | PAK,LB | PAK,WT | PAK,WT,LB | PAK,pilR | PAK,pmrB6,LB | PAO1 | PAO1,0.56mg/mL farnesol | PAO1,ABTGC | PAO1,DDS | PAO1,GUN,LB,glucose | PAO1,HapZ,early stat | PAO1,LB | PAO1,LB,glucose | PAO1,LB,untreated | PAO1,M9-CA,early stat | PAO1,M9-CA,log | PAO1,RsmN+ | PAO1,SagS,early stat | PAO1,WT | PAO1,WT,BHI | PAO1,WT,LB | PAO1,WT,MOPS acetate | PAO1,WT,MOPS glycerol | PAO1,early stat | PAO1,ersA,BHI | PAO1,lasR rhlR,M9-CA,early stat | PAO1,lasR rhlR,M9-CA,log | PAO1,liquid culture | PAO1,mexZ,LB | PAO1,oxylipin- | PAO1,pBAD-yhjH | PAO1,pUCP18::msr(E) | PAO1,qslA,M9-CA,early stat | PAO1,qslA,M9-CA,log | PAO1,qteE,M9-CA,early stat | PAO1,qteE,M9-CA,log | PAO1,untreated | PAO1,wspFpelApslBCD,LB | PAO1,wspFpelApslBCD,LB,untreated | Y31,LB | Y71,LB | Y82,LB | Y89,LB | ciproflaxin | liquid culture | m pheno | mexT | nirS | pHerdB20T-gp68 | untreated |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CRN81460 (cph2_1) | -0.45 | -0.06 | -1.22 | -0.12 | 4.13 | 0.12 | -1.44 | 0.65 | -2.24 | 0.11 | -0.63 | -0.5 | -0.19 | -0.55 | -2.73 | -0.28 | -1.65 | -2.36 | 0.02 | 0.78 | 0.53 | -0.88 | -0.22 | -1.31 | 0.53 | 0.66 | -0.66 | -1.01 | -1.43 | -0.36 | -0.29 | 1.06 | 0.53 | -1.24 | -1.73 | 0.46 | -2.84 | -2.27 | -0.78 | -0.27 | -1.24 | -3.23 | -1.14 | -2.88 | -1.41 | -0.37 | -0.71 | -1.6 | -0.61 | -2.43 | -1.77 | -1.38 | -3.19 | -2.03 | -0.81 | -3.99 | -0.42 | -2.61 | -2.33 | -3.71 | -1.87 | -3.77 | -2.48 | -4.08 | -3.09 | 0.19 | 1.14 | -0.85 | -0.33 | -1.37 | -2.08 | 0.6 | -1.96 | 0.05 | 3.47 | -1.26 |
CRN81473 (ecpD_1) | -0.71 | -0.46 | -2.03 | -0.11 | 4.6 | -0.05 | -1.04 | 1.67 | -2.0 | -0.18 | -1.09 | -0.61 | -0.7 | 0.47 | -1.82 | -1.49 | -2.5 | -3.07 | -0.94 | 0.07 | -0.91 | -0.85 | -0.87 | -2.62 | -0.67 | -0.6 | -1.44 | -1.51 | -2.06 | -0.57 | -1.55 | 0.97 | 0.47 | -1.88 | -4.68 | 1.2 | -3.01 | -2.72 | -0.72 | -0.16 | -1.6 | -5.0 | -1.65 | -2.8 | -1.55 | 0.05 | -1.51 | -2.41 | -1.2 | -2.5 | -0.72 | -2.79 | -3.22 | -1.64 | -0.7 | - | -0.77 | -4.08 | -1.88 | -3.7 | -2.71 | -4.19 | -2.58 | -4.74 | -2.82 | -1.02 | 0.67 | -0.7 | -0.94 | -2.03 | -2.06 | 0.64 | -2.49 | -1.28 | 3.53 | 0.08 |
| -1.04 | 0.1 | -2.04 | -0.18 | 4.09 | 0.19 | -0.57 | 1.39 | -1.32 | -0.22 | -0.69 | -0.49 | -0.33 | 0.66 | -1.48 | -1.08 | -1.41 | -2.61 | -0.8 | 0.42 | -0.1 | -1.12 | -0.73 | -1.59 | 0.32 | -0.45 | -0.99 | -1.3 | -2.51 | -2.03 | -0.98 | 0.9 | 0.62 | -1.39 | -2.66 | 1.93 | -0.68 | -1.47 | 0.91 | 0.59 | -0.79 | -3.7 | -0.89 | -0.96 | -0.95 | -0.14 | -0.5 | -1.43 | -0.64 | -0.48 | -0.65 | -0.67 | -3.32 | -1.21 | -0.67 | -3.14 | -1.06 | -2.2 | -1.31 | -3.38 | -1.51 | -2.94 | -1.67 | -2.52 | -1.66 | -0.42 | 0.41 | -0.85 | -0.87 | -1.47 | -1.23 | 0.67 | -2.41 | -0.24 | 2.77 | 0.33 | |
CRN81525 (elfC) | -0.5 | 0.31 | -1.28 | -0.02 | 3.29 | 0.81 | -0.41 | 0.95 | -0.98 | 0.09 | -0.56 | -0.31 | -0.29 | 0.55 | -1.06 | -0.11 | -1.1 | -1.57 | -0.14 | 1.31 | 0.2 | -0.72 | -0.61 | -0.83 | 0.64 | 0.65 | -0.78 | -0.93 | -2.05 | -0.53 | -0.9 | 0.96 | 0.6 | -0.79 | -2.31 | 1.06 | -0.14 | -1.82 | 0.26 | 0.54 | -1.05 | -3.14 | -0.27 | -0.39 | -0.77 | -0.01 | -0.94 | -1.05 | 0.32 | -0.24 | -0.1 | -1.22 | -3.1 | -1.09 | -0.56 | -4.24 | -0.2 | -2.02 | -1.56 | -3.02 | -2.34 | -2.8 | -1.35 | -2.43 | -1.52 | 0.04 | 1.04 | -0.13 | 0.04 | -1.29 | -1.25 | 0.59 | -1.61 | 0.35 | 2.66 | -0.04 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.