Heatmap: Cluster_43 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL17856 (BN171_1850001)
0.19 0.78 0.28 0.26 -0.29 0.49 -0.06 -0.63 -1.85 -0.09 -0.81 -0.38 -0.49 -0.38 0.04 -1.0 0.13 -0.37 0.53 0.84 0.87 -0.71 -0.51 0.39 -0.0 0.52 0.08 -0.31 -1.06
CCL18038 (BN171_2040003)
-4.7 -2.0 -4.65 -1.94 -3.98 -2.59 1.8 -3.34 -0.2 0.26 -0.94 0.01 1.48 -3.68 -1.69 -4.64 1.7 -4.21 1.38 -1.43 -1.54 3.26 -4.44 -1.24 -1.94 -4.34 -1.38 -2.89 -1.83
CCL18039 (BN171_2040004)
-4.35 -1.82 -4.68 -1.81 -3.75 -2.96 1.64 -3.0 0.35 0.39 -0.83 -0.06 1.71 -3.41 -1.37 -4.72 1.29 -3.62 1.41 -1.23 -1.59 3.09 -4.04 0.16 -1.44 -4.17 -1.15 -2.82 -1.62

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.