Heatmap: Cluster_21 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL16962 (BN171_1030012)
-3.68 -1.82 -2.38 0.31 -1.15 -2.08 3.35 -2.9 -1.68 -0.77 - - 1.4 -2.77 -1.0 0.23 -2.25 -1.92 -1.8 - -1.35 -2.21 -0.91 -3.84 -1.49 -4.72 2.73 0.87 -
CCL16963 (BN171_1030013)
-5.14 - -4.02 -1.47 -3.95 -3.13 3.86 -4.3 -1.94 -0.65 -0.97 -2.71 0.81 -3.09 - -0.46 -2.91 -4.93 -2.71 -3.96 -4.81 0.57 -2.53 -3.11 -3.37 -5.17 2.59 -0.9 -0.5
CCL17044 (BN171_1110004)
-1.2 -0.7 -1.56 -0.86 -1.28 -1.47 -0.47 -1.42 -0.83 0.08 -0.15 -0.52 -0.81 -2.6 -1.61 -1.09 -0.71 -1.85 0.35 0.27 -1.66 -1.24 1.34 0.31 -0.63 -1.26 3.11 1.06 -0.37
CCL17045 (BN171_1110005)
-1.15 -0.46 -1.66 -0.82 -1.59 -1.4 -0.26 -1.72 -0.22 -0.21 -0.2 -0.6 -0.8 -3.35 -1.64 -1.27 -0.38 -1.92 0.48 -0.38 -1.24 -0.97 1.19 1.51 -0.5 -2.17 2.95 0.78 -0.3
CCL17077 (leuA)
-3.09 -3.39 -3.08 -3.69 -2.87 -0.96 2.5 -3.86 -2.56 1.96 -1.87 0.93 -1.36 -4.44 -3.98 -0.32 0.19 -4.32 -1.4 -2.72 -4.26 -2.54 -1.37 -2.7 -2.31 -2.86 3.45 -0.53 -2.32
CCL17102 (BN171_1210022)
- - - - - 2.64 - - - - - - - - - - - - 1.34 -2.32 -2.64 -3.79 1.39 0.88 0.72 -2.81 3.76 - -
CCL17205 (BN171_140008)
-1.63 -2.41 -1.37 -0.93 -1.68 -4.41 2.18 -2.38 -3.63 -0.64 -1.5 -1.69 0.04 -1.39 -1.66 -0.91 -2.64 -1.33 -1.51 -1.28 -1.69 0.84 -2.9 -1.95 -1.84 -3.02 3.8 -1.08 -2.15
CCL17243 (BN171_1410005)
-1.79 -5.04 -2.22 -2.94 -1.93 -1.97 3.13 -3.45 -2.33 0.93 0.31 0.19 0.98 -1.79 -3.04 0.22 -0.64 -1.49 -0.87 -2.19 -3.06 -0.66 -0.1 -1.73 -0.41 -3.11 1.29 1.54 -0.04
CCL17286 (BN171_1430013)
-2.51 -2.42 -2.2 -1.63 -2.19 -0.21 3.05 -3.22 -2.35 1.72 0.45 1.17 0.67 -2.51 -2.51 -1.31 -0.99 -2.74 -0.71 -2.17 -1.22 0.66 -1.69 -0.76 -0.14 -3.58 1.05 -1.91 0.54
CCL17317 (recV)
-1.21 -3.24 0.13 -0.8 0.38 -0.88 2.46 -2.64 -1.53 -0.3 -1.58 -0.93 0.4 -0.01 -2.13 0.07 -0.83 -0.9 -0.78 0.72 -1.05 0.07 0.35 -0.15 0.28 -0.95 1.58 0.65 -1.56
CCL17319 (BN171_1440003)
-4.89 -7.5 -5.23 -3.89 - -3.73 4.04 - -4.4 -0.38 -3.41 -3.58 -0.54 - - - -3.42 - -4.2 - -5.03 0.77 -2.65 -2.8 -2.29 - 3.0 -2.68 -2.71
CCL17345 (spoIIIAC)
-2.69 -3.05 -2.4 -1.05 -1.13 - 1.98 -3.98 - -1.3 -1.51 1.37 0.29 -3.19 -1.44 -3.03 -3.78 -1.71 -3.9 - -2.75 3.27 -3.37 -6.27 - - 2.99 -3.15 -
CCL17347 (BN171_1450008)
- - - - - - - - - - - - - - - - - - - - - - - - - - 4.86 - -
CCL17601 (BN171_1600005)
-2.8 -2.16 -1.11 -1.21 -2.3 -5.65 3.51 -3.42 -2.15 1.47 - -0.58 0.99 -2.57 -2.83 0.05 -2.64 -3.04 -1.98 -1.04 -0.83 1.41 -4.61 -3.68 -3.04 -2.84 1.73 0.13 -
CCL17782 (hom)
-6.48 -6.67 -6.43 -6.79 -5.0 -2.99 -1.43 -4.68 -6.77 -0.96 -3.08 -2.17 -1.98 -5.87 -6.29 -2.25 -4.15 -4.53 -4.1 -4.82 -5.9 -2.03 -5.77 -4.14 -3.66 -4.42 4.71 -3.31 -3.02
CCL17784 (BN171_1800007)
- - - - - - - - - - - - - - - - - - - - - - - - - - 4.86 - -
CCL17835 (sodA)
-2.6 -4.34 -2.8 -2.17 -2.66 -4.3 0.36 -3.52 -6.03 -2.5 -2.05 -3.9 1.06 -3.2 -3.8 -1.93 -3.32 -3.39 -3.17 -2.34 -1.87 -0.29 -3.28 -3.29 -2.03 -3.1 4.41 -1.98 -2.81
CCL17999 (BN171_2000002)
- - - - - 3.29 - - - - - - - - - - 2.58 - -1.25 - - - - - - - 3.68 - -
CCL18031 (BN171_2030017)
-2.51 -2.96 -1.55 -0.98 -2.28 -3.11 3.38 -2.26 -1.41 0.36 -0.37 -0.9 0.78 -2.88 -2.7 -0.6 -1.96 -2.27 -0.8 -3.08 -2.75 2.08 -0.06 -0.08 -1.79 -4.07 1.31 -0.65 -1.41
CCL18080 (BN171_210016)
0.1 -0.57 -0.43 -0.96 -0.44 -1.82 2.23 -1.19 -1.36 -0.44 -0.52 -0.36 0.04 -0.78 -0.62 0.12 -0.82 -0.47 -0.52 -1.13 -1.43 -2.41 -0.87 -0.67 1.01 -1.4 2.46 0.4 -0.99
CCL18081 (BN171_210017)
-3.26 -1.92 -2.93 -2.55 -2.79 -0.99 3.23 -2.3 -0.92 -0.06 -1.16 0.8 0.16 -2.28 -2.2 -1.06 -1.05 -2.78 -1.76 -2.76 -2.9 -1.78 -3.3 -3.76 -2.48 -2.75 3.28 -1.41 -1.68
CCL18139 (BN171_2110001)
-1.26 -1.43 -1.31 -1.68 -2.32 -3.83 0.92 -1.46 0.29 -1.23 -1.1 -1.62 0.51 -1.67 -1.27 -2.81 -0.31 -1.2 -1.11 -1.53 -2.29 2.31 -0.55 -1.14 -2.59 -2.45 3.48 -5.14 -1.63
CCL18346 (BN171_2220033)
-1.61 -3.06 -0.7 0.15 -0.76 -5.18 2.86 -3.67 -4.18 -1.57 -2.43 -1.01 0.22 -0.88 -2.12 -1.36 0.68 -1.43 -0.99 -0.38 -0.38 -1.58 0.28 -0.77 -1.23 -0.61 2.85 -0.59 -1.48
CCL18368 (BN171_2240008)
- - - - - -0.22 - - - - - - - - - - - - 1.9 -0.9 -0.81 0.31 2.79 0.73 0.55 -2.21 3.56 - -
CCL18470 (BN171_2380001)
-1.44 -2.14 -1.38 -0.88 -1.5 -2.48 0.59 -1.81 -1.9 -1.62 -2.17 -1.82 1.91 -1.22 -2.32 -2.11 -0.92 -1.86 -3.47 -1.31 -1.98 -0.94 -3.05 -1.55 -1.56 -1.5 3.96 -0.93 -3.42
CCL18481 (BN171_2380012)
-1.85 -2.13 -0.96 0.85 -0.69 -2.1 3.15 -4.03 -6.36 -0.69 -2.13 -1.37 0.53 -1.47 -1.83 -0.22 -2.11 -2.44 -2.07 -3.17 -1.98 1.32 -2.9 -2.82 -2.39 -3.87 2.74 0.21 -1.56
CCL18609 (BN171_2470003)
- - - - - - - - - - - - 2.37 - - - 1.5 - - - - - - 1.01 - - 3.5 2.94 -
CCL18614 (BN171_2470008)
- - - - -9.09 -0.05 - - - - - - - - - - - - 0.77 0.81 2.17 -0.5 1.72 1.7 1.45 0.06 3.03 -0.18 -
CCL18644 (BN171_2480019)
-2.14 -1.29 -2.57 -1.64 -3.22 -2.4 2.1 -2.99 -2.92 -3.51 - -2.87 0.32 -2.48 -2.27 -3.47 -2.42 -2.33 -3.43 -2.55 -2.25 1.52 -1.94 -2.04 -2.19 -5.44 3.99 -0.54 -
CCL18694 (BN171_2520001)
- - - - - 3.15 - - - - - - - - - - - - 0.75 - - - - 1.08 0.9 2.55 3.1 - -
CCL18698 (BN171_2550001)
- - - - - -0.25 - - - - - - - - - - - - 0.5 1.25 0.89 -2.32 1.12 0.89 1.02 -0.85 3.97 - -
CCL18699 (BN171_2550002)
- - - - - 1.26 - - - - - - - - - - - - 1.03 1.14 0.9 -4.19 2.08 0.69 1.02 -1.59 3.61 - -
CCL18732 (BN171_260001)
-2.07 -6.02 -1.09 -0.82 -1.26 -2.41 2.47 -3.15 -3.59 0.74 -0.3 -0.08 1.6 -1.44 -3.66 -0.21 -0.72 -1.56 -0.4 -2.08 -2.67 0.02 -0.91 -1.54 0.92 -2.45 1.93 1.55 -0.31
CCL18759 (BN171_2600018)
- - - - - -3.66 - - - - - - -1.81 - - - 4.23 - -4.72 - - - - - - - 3.29 -3.49 -
CCL18781 (BN171_2620004)
-4.24 -4.43 -4.54 -3.97 -4.45 -3.35 2.37 -5.07 -3.23 2.62 -0.13 1.54 -0.27 -5.44 -5.39 -2.11 -2.87 -4.9 -1.09 -4.59 -3.79 -0.7 -0.6 -1.42 -2.02 -5.17 3.21 -2.24 -3.01
CCL18832 (BN171_2680001)
-0.72 -0.94 -0.96 -0.4 -0.98 -0.48 1.45 -1.17 0.25 0.18 -0.35 0.06 -0.12 -1.39 -1.5 -0.07 -0.34 -1.06 0.43 -0.49 -0.15 1.35 1.33 0.5 -0.49 -1.11 1.18 -0.98 -0.36
CCL18846 (BN171_2690003)
0.16 0.94 -0.3 0.36 -0.74 -1.17 0.8 -0.58 0.32 0.16 -0.2 -0.42 0.08 -0.56 0.29 -0.28 -0.55 -0.7 -0.53 0.19 -0.16 -0.12 0.23 0.67 -0.89 -0.92 1.37 -0.8 -0.49
CCL18856 (BN171_2690013)
-4.2 - -4.24 -3.5 -5.79 -5.24 4.38 -5.99 -2.27 -0.96 0.39 -1.32 0.9 -4.36 -4.45 -3.01 -4.21 -5.66 -3.71 - -5.36 0.48 -3.03 -5.28 -5.36 - 0.44 -2.07 -
CCL18882 (BN171_2700005)
- - - - - - - - - - - - - - - - 3.59 - - - - - - - - - 4.05 -1.07 -
CCL18944 (BN171_2750006)
- - - - - - - - - - - - - - - - - - - - - - - - - - 4.86 - -
CCL19023 (BN171_2800002)
-0.12 -0.58 0.12 2.06 0.98 -2.82 - -2.66 - - - - 0.91 -0.32 0.6 - -1.49 -0.55 -5.12 -0.44 1.03 - - -0.43 0.26 -1.52 2.67 1.66 -
CCL19119 (BN171_2870049)
-3.57 -2.71 -2.4 -2.4 -2.04 -4.43 3.53 -3.05 -4.5 1.6 -2.21 0.77 0.52 -3.18 -3.42 -1.54 -3.04 -3.26 -3.63 -2.8 -2.91 2.92 -3.42 -5.83 -5.44 -5.22 -0.19 -1.91 -
CCL19150 (BN171_2900005)
- -4.8 -2.75 -5.5 -1.9 -1.33 3.88 -5.11 -2.78 0.3 -3.13 -2.09 0.94 -1.54 -4.63 0.05 -1.73 -3.13 -1.93 -5.63 -2.33 0.17 -0.81 -3.06 -2.69 -3.97 1.89 0.23 -0.99
CCL19153 (sspA)
-4.83 -4.89 -4.9 -4.55 -5.14 -4.04 2.03 -4.88 -6.99 -0.0 0.43 0.1 0.73 -5.31 -4.94 -4.3 -4.31 -4.38 -4.05 -5.03 -3.93 -0.07 -3.75 -3.5 -3.39 -4.74 4.11 -4.23 -0.56
CCL19291 (BN171_3020003)
- - -2.61 - - 0.43 - -2.8 - - - - -1.21 - - - -1.02 - -2.72 - - - - -1.46 -1.0 - 4.55 0.94 -
CCL19328 (glyA)
-0.87 0.15 -0.92 -0.05 -1.01 -2.61 2.62 -0.84 -0.64 0.37 -0.81 0.9 -0.19 -1.91 -0.08 -0.75 -0.53 -0.81 0.11 -1.01 -0.58 0.08 0.36 -0.36 -1.54 -1.74 1.53 -0.6 -0.72
CCL19359 (BN171_3080006)
-1.38 -2.48 -1.8 -1.71 -1.47 -4.67 2.42 -1.76 -2.35 -0.25 -0.66 -0.94 0.54 -2.04 -2.45 -0.17 -0.6 -1.31 -2.88 -4.68 -4.19 1.96 -1.8 -3.47 -3.33 -4.84 3.31 -0.36 -1.15
CCL19360 (BN171_3080007)
-2.26 -3.68 -2.69 -2.82 -2.21 -4.86 3.28 -2.73 -2.27 0.82 0.12 0.39 0.23 -2.84 -3.7 0.56 -0.53 -1.98 -2.5 -4.82 -5.11 1.36 -1.71 -3.68 -3.57 -5.54 2.41 -0.84 -0.11
CCL19363 (BN171_3080010)
-1.67 -2.8 -2.08 -2.57 -0.76 -2.7 2.31 -1.64 -1.69 0.38 -0.56 0.17 0.48 -1.88 -3.22 0.15 -1.11 -1.18 -1.39 -1.05 -1.98 0.09 -0.44 -1.99 -1.51 -1.59 3.12 0.61 -0.26
CCL19731 (sspB)
-6.7 -5.97 -6.48 -5.55 -6.99 -9.15 -0.08 -7.66 -7.07 -1.63 -1.41 -2.1 -0.25 -6.62 -5.5 -8.34 -3.22 -5.91 -3.76 -6.67 -3.63 -0.12 -3.63 -6.34 -7.94 -7.72 4.62 -5.7 -2.42
CCL19739 (BN171_3440014)
- - - - - 2.68 - - - - - - - - - - 1.26 - -1.77 - - - - - - - 3.67 2.84 -
CCL19849 (BN171_3550002)
- - - - - -0.46 - - - - - - - - - - - - 1.94 -3.5 -1.76 0.72 1.87 2.2 0.65 -3.21 3.59 -1.14 -
CCL19850 (BN171_3560001)
- - - - - -1.33 - - - - - - - - - - - - 1.3 -0.97 -0.95 0.79 1.48 0.26 -0.7 -1.75 4.13 0.01 -
CCL19851 (BN171_3560002)
- - - - - 0.12 - - - - - - - - - - - - -1.8 -1.03 -1.03 - -2.61 0.88 0.14 -2.55 4.42 0.94 -
CCL20017 (BN171_3660014)
-4.29 - -3.69 -3.44 -4.28 -4.73 0.96 -4.51 - - - -2.81 0.3 -5.54 -5.13 -3.59 -4.04 -5.15 -2.48 - - -2.81 -3.59 -3.98 -1.26 - 4.55 -0.5 -
CCL20030 (BN171_3670013)
-2.12 -1.65 -1.99 -1.45 -1.84 -2.92 2.34 -1.7 -3.41 -0.7 -2.32 -1.2 -0.37 -3.0 -1.83 -1.63 -2.17 -1.62 -0.18 -2.47 -2.04 3.02 -0.68 -1.69 -2.45 -3.18 2.88 -1.1 -2.63
CCL20031 (spoIIR)
-2.29 -1.71 -2.33 -2.01 -1.86 -2.95 3.29 -1.63 -2.44 0.56 -0.57 -0.23 0.18 -2.73 -2.19 -0.28 -1.84 -2.08 0.21 -2.73 -2.82 1.36 0.16 -1.69 -2.01 -3.55 1.99 -0.02 -0.36
CCL20155 (BN171_3710009)
-0.06 -0.91 -0.91 -1.85 -2.07 -2.73 0.22 -1.53 0.34 -0.14 0.21 0.29 0.43 -0.61 -1.14 0.34 0.53 -1.29 -0.07 -0.52 -0.9 -3.52 -0.09 1.07 0.49 -2.13 2.05 0.98 0.7
CCL20225 (BN171_3800005)
- - - - - - - - - - - - - - - - - - - - - - - - - - 4.86 - -
CCL20243 (BN171_3880002)
- - - - - -0.69 - - - - - - - - - - - - 2.24 -2.71 -1.71 -1.46 1.66 2.84 1.43 -4.98 3.29 - -
CCL20292 (BN171_4050001)
- - - - - -0.19 - - - - - - - - - - - - -2.3 - - - - - - - 4.78 -1.37 -
CCL20424 (BN171_4410002)
- - - - - 2.97 - - - - - - - - - - - - -0.0 - - - - - - - 4.27 -0.11 -
CCL20472 (BN171_520001)
- - - - - 0.74 - - - - - - - - - - 3.52 - -3.54 - - - - - - - 3.88 0.14 -
CCL20473 (thrS)
-0.69 -1.31 -0.73 -1.02 -0.04 -0.99 -0.11 -0.15 -1.43 -0.04 0.23 0.41 0.5 -1.17 -0.88 0.25 -0.29 0.15 -0.09 -0.62 -1.34 -0.4 -0.28 0.55 -0.39 -0.66 2.37 0.14 0.58
CCL20494 (BN171_580003)
-6.31 -5.75 -5.81 -4.77 -5.97 -9.39 -4.21 -6.33 0.87 -4.58 -4.68 -4.53 0.77 -7.19 -5.37 -4.56 -3.59 -5.82 -1.95 -7.82 -5.68 -4.23 -3.28 2.72 -5.8 -7.55 4.16 -13.26 -4.3
CCL20495 (BN171_580004)
-6.67 -6.04 -5.73 -5.16 -7.25 -8.85 -3.26 -5.74 1.59 -4.64 -3.89 -3.76 0.86 -6.35 -5.56 -4.75 -4.47 -5.96 -1.84 -6.77 -4.83 -4.84 -3.37 2.86 -5.22 -7.38 3.98 - -2.76
CCL20647 (BN171_820001)
- - - - - 2.41 - - - - - - - - - - - - -2.53 - - - - - - - 4.25 2.19 -
CCL20688 (BN171_920001)
-2.23 -2.08 -1.38 -0.98 -2.11 -1.66 2.62 -2.48 -1.06 -0.42 -0.11 -0.0 0.35 -2.28 -1.11 -0.04 -1.15 -1.71 0.43 -1.32 -0.07 0.4 0.26 0.48 -0.2 -1.74 1.85 1.2 -1.8

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.