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Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19003 (nhaA) | 50.33 | 81.27 | 91.1 | 68.15 | 77.88 | 74.13 | 69.83 | 92.65 | 58.24 | 137.1 | 58.25 | 44.56 | 136.54 | 148.61 | 32.8 | 37.9 | 63.49 | 94.34 | 28.41 | 56.36 | 55.75 | 76.53 | 19.47 | 70.4 | 57.34 | 156.68 | 58.07 | 65.96 | 51.7 | 21.26 | 26.15 | 82.24 | 44.29 | 28.12 | 48.32 | 70.53 | 104.92 | 100.3 | 96.87 |
AAL19004 (nhaR) | 49.1 | 67.59 | 56.08 | 56.21 | 53.92 | 45.2 | 70.9 | 71.69 | 47.7 | 127.25 | 51.58 | 30.08 | 64.28 | 98.65 | 35.02 | 55.08 | 97.31 | 92.18 | 38.19 | 62.47 | 45.67 | 46.97 | 37.14 | 60.53 | 30.85 | 89.02 | 41.95 | 60.59 | 42.7 | 17.44 | 19.86 | 52.15 | 33.19 | 56.6 | 83.1 | 50.19 | 96.3 | 74.05 | 57.53 |
AAL19173 (htrA) | 45.54 | 206.23 | 308.67 | 141.48 | 63.29 | 199.53 | 79.17 | 134.1 | 135.01 | 191.57 | 146.67 | 114.68 | 105.38 | 140.43 | 164.56 | 70.21 | 91.0 | 66.38 | 64.77 | 74.92 | 65.56 | 1304.27 | 224.19 | 86.33 | 85.83 | 245.4 | 76.33 | 313.94 | 72.49 | 66.59 | 81.9 | 89.6 | 50.18 | 35.87 | 54.19 | 61.66 | 208.31 | 84.07 | 70.82 |
AAL19317 (STM0363) | 44.05 | 120.14 | 36.33 | 15.11 | 10.1 | 26.41 | 55.43 | 102.65 | 16.73 | 14.58 | 28.59 | 4.38 | 32.68 | 167.85 | 6.28 | 29.52 | 19.57 | 15.91 | 16.96 | 21.28 | 149.16 | 366.53 | 4.65 | 28.17 | 67.85 | 24.55 | 16.33 | 38.21 | 29.32 | 4.55 | 17.78 | 47.23 | 15.6 | 5.26 | 24.14 | 18.8 | 63.76 | 16.75 | 68.15 |
AAL19459 (ybbO) | 51.82 | 60.02 | 40.05 | 44.24 | 32.77 | 21.48 | 41.11 | 63.28 | 32.92 | 38.75 | 40.66 | 40.99 | 67.38 | 101.45 | 71.45 | 32.49 | 30.35 | 39.49 | 43.67 | 46.47 | 18.17 | 41.32 | 15.87 | 57.34 | 21.51 | 65.03 | 45.62 | 56.13 | 51.25 | 4.93 | 27.58 | 41.94 | 50.28 | 26.54 | 59.5 | 30.01 | 72.63 | 33.71 | 78.21 |
AAL19460 (tesA) | 42.43 | 56.74 | 61.85 | 34.4 | 31.18 | 23.43 | 41.37 | 85.32 | 36.85 | 49.92 | 44.25 | 27.44 | 95.32 | 153.22 | 58.94 | 37.31 | 37.66 | 35.28 | 38.15 | 44.85 | 28.8 | 57.41 | 28.7 | 63.21 | 36.76 | 70.07 | 40.95 | 96.64 | 55.14 | 12.14 | 26.92 | 67.69 | 48.3 | 34.62 | 46.31 | 36.94 | 76.0 | 40.7 | 92.92 |
AAL19461 (ybbA) | 16.32 | 27.04 | 34.41 | 19.01 | 11.6 | 9.7 | 7.88 | 34.25 | 15.01 | 18.5 | 15.11 | 12.82 | 41.27 | 63.85 | 15.07 | 9.17 | 9.17 | 21.09 | 20.28 | 22.44 | 29.27 | 17.84 | 9.15 | 27.75 | 22.63 | 31.0 | 17.28 | 46.55 | 40.84 | 3.2 | 12.65 | 15.24 | 27.39 | 9.43 | 8.13 | 12.08 | 46.94 | 19.79 | 25.21 |
AAL19558 (dsbG) | 53.68 | 90.54 | 110.69 | 62.32 | 57.3 | 57.24 | 87.03 | 76.61 | 34.99 | 62.01 | 45.75 | 20.98 | 126.65 | 55.85 | 97.78 | 24.97 | 68.92 | 63.72 | 76.3 | 71.73 | 63.38 | 111.66 | 35.97 | 75.38 | 76.07 | 99.62 | 42.88 | 83.76 | 51.06 | 7.75 | 37.21 | 57.29 | 49.47 | 26.22 | 64.67 | 38.2 | 138.67 | 65.51 | 81.16 |
AAL19588 (dacA) | 100.94 | 101.77 | 37.58 | 96.43 | 64.35 | 80.85 | 139.9 | 96.04 | 67.52 | 76.39 | 71.68 | 168.23 | 85.93 | 144.8 | 133.75 | 47.79 | 116.45 | 69.69 | 78.05 | 81.48 | 19.51 | 70.73 | 77.41 | 85.33 | 45.89 | 160.71 | 145.71 | 107.5 | 73.19 | 61.93 | 47.6 | 87.47 | 69.32 | 51.35 | 184.29 | 101.0 | 87.39 | 47.12 | 124.29 |
AAL19592 (ybeA) | 200.87 | 114.23 | 59.67 | 100.95 | 96.56 | 24.58 | 116.88 | 126.87 | 126.69 | 69.9 | 174.68 | 205.53 | 141.38 | 180.75 | 124.22 | 34.38 | 111.31 | 212.59 | 232.99 | 235.97 | 41.87 | 99.93 | 44.64 | 181.72 | 66.75 | 172.53 | 232.03 | 126.91 | 142.81 | 44.04 | 52.31 | 104.52 | 150.77 | 29.14 | 169.76 | 207.93 | 138.38 | 84.17 | 223.13 |
AAL19593 (ybeB) | 279.75 | 178.71 | 74.31 | 122.15 | 109.95 | 37.8 | 88.58 | 175.01 | 194.56 | 103.0 | 256.95 | 239.27 | 188.27 | 284.6 | 85.82 | 58.62 | 39.78 | 120.34 | 122.45 | 140.74 | 53.67 | 110.4 | 67.68 | 231.64 | 120.91 | 238.81 | 282.54 | 228.1 | 202.82 | 56.65 | 79.93 | 117.87 | 195.3 | 40.37 | 48.43 | 269.2 | 186.05 | 95.01 | 263.81 |
AAL19631 (ybfM) | 22.02 | 152.79 | 41.8 | 22.85 | 41.78 | 2.46 | 4.74 | 16.88 | 54.7 | 66.86 | 36.07 | 3.04 | 34.34 | 5.3 | 49.22 | 13.39 | 89.26 | 49.25 | 33.46 | 60.64 | 4.22 | 1043.04 | 121.84 | 49.22 | 6.02 | 15.77 | 3.82 | 33.84 | 3.88 | 4.66 | 14.58 | 27.27 | 4.11 | 19.77 | 74.69 | 3.45 | 71.94 | 25.45 | 36.98 |
AAL19632 (ybfN) | 42.8 | 149.3 | 65.76 | 20.52 | 70.42 | 23.03 | 3.6 | 21.61 | 72.73 | 99.41 | 51.19 | 4.58 | 32.45 | 17.21 | 17.78 | 13.5 | 27.3 | 12.24 | 16.2 | 19.2 | 14.67 | 1116.67 | 145.71 | 21.18 | 19.09 | 30.18 | 6.28 | 65.27 | 12.79 | 39.31 | 107.27 | 30.68 | 12.16 | 13.49 | 41.77 | 6.36 | 39.32 | 39.72 | 39.96 |
AAL19730 (bioA) | 42.64 | 39.88 | 24.58 | 7.49 | 1.98 | 37.21 | 1.2 | 94.87 | 5.73 | 2.82 | 7.63 | 2.63 | 15.12 | 194.77 | 1.34 | 14.56 | 2.03 | 1.92 | 1.74 | 1.98 | 64.33 | 60.77 | 0.57 | 16.59 | 4.44 | 73.81 | 45.66 | 10.28 | 26.29 | 0.41 | 2.03 | 3.86 | 13.71 | 0.81 | 4.13 | 6.05 | 26.57 | 10.86 | 3.29 |
AAL19931 (ycbL) | 91.37 | 232.82 | 130.82 | 116.68 | 110.96 | 85.99 | 146.96 | 230.41 | 94.99 | 220.01 | 85.43 | 211.32 | 116.76 | 470.7 | 138.12 | 53.7 | 62.35 | 143.41 | 181.11 | 178.72 | 162.03 | 463.6 | 87.99 | 110.98 | 161.2 | 216.88 | 196.48 | 179.51 | 188.36 | 30.8 | 103.36 | 77.24 | 169.0 | 42.43 | 97.52 | 140.41 | 138.59 | 93.42 | 137.05 |
AAL20024 (orfX) | 26.01 | 129.44 | 113.26 | 5.73 | 55.45 | 2.1 | 3.42 | 25.93 | 29.24 | 34.2 | 16.92 | 15.74 | 67.53 | 2.38 | 0.0 | 50.35 | 7.29 | 0.0 | 0.0 | 0.0 | 123.21 | 158.15 | 77.18 | 76.38 | 38.31 | 5.68 | 64.94 | 70.5 | 3.39 | 26.89 | 52.87 | 40.51 | 2.98 | 71.33 | 4.49 | 319.15 | 158.39 | 40.28 | 30.27 |
AAL20176 (STM1250) | 137.19 | 45.56 | 170.27 | 16.8 | 63.22 | 610.22 | 29.04 | 66.97 | 32.04 | 30.71 | 79.34 | 4.24 | 60.17 | 63.13 | 53.63 | 103.72 | 34.58 | 75.65 | 79.66 | 110.34 | 1931.84 | 153.39 | 95.04 | 54.71 | 207.25 | 23.45 | 77.6 | 188.18 | 14.19 | 24.31 | 62.87 | 62.54 | 15.1 | 137.82 | 13.72 | 19.03 | 343.75 | 49.09 | 95.11 |
AAL20180 (STM1254) | 122.05 | 768.37 | 2650.88 | 244.39 | 210.57 | 1919.84 | 500.34 | 1923.38 | 96.63 | 919.18 | 152.77 | 45.37 | 17.25 | 66.85 | 283.55 | 215.73 | 728.06 | 226.09 | 219.38 | 272.18 | 164.86 | 11860.63 | 13509.37 | 324.16 | 163.98 | 96.05 | 682.27 | 339.62 | 26.95 | 2162.54 | 243.85 | 142.46 | 30.09 | 178.34 | 115.13 | 968.59 | 676.79 | 328.73 | 24.99 |
AAL20202 (yeaO) | 120.34 | 111.07 | 172.12 | 52.59 | 76.93 | 17.03 | 87.46 | 109.61 | 85.25 | 132.53 | 132.68 | 79.67 | 181.61 | 123.47 | 93.41 | 122.35 | 33.41 | 75.88 | 66.8 | 89.06 | 85.23 | 174.16 | 89.8 | 68.57 | 122.22 | 70.22 | 67.87 | 120.84 | 100.81 | 16.19 | 94.08 | 114.25 | 98.04 | 130.55 | 38.66 | 80.95 | 88.91 | 92.8 | 133.65 |
AAL20270 (ydiU) | 73.75 | 61.26 | 86.3 | 31.86 | 61.76 | 17.62 | 50.07 | 78.44 | 20.8 | 16.62 | 28.85 | 6.53 | 125.01 | 151.34 | 18.88 | 47.6 | 21.64 | 26.57 | 24.96 | 27.56 | 103.42 | 45.37 | 8.21 | 50.27 | 74.8 | 55.41 | 24.73 | 64.26 | 39.38 | 3.88 | 21.55 | 76.52 | 35.56 | 41.92 | 33.32 | 33.99 | 61.03 | 72.37 | 104.67 |
AAL20293 (sufA) | 79.69 | 111.36 | 124.1 | 31.75 | 12.0 | 84.04 | 337.33 | 91.15 | 4.73 | 8.17 | 6.92 | 1.95 | 116.77 | 166.01 | 26.24 | 279.25 | 51.17 | 165.87 | 86.86 | 129.34 | 80.7 | 183.66 | 2.77 | 65.98 | 71.66 | 33.91 | 10.14 | 237.67 | 18.31 | 1.55 | 23.18 | 71.71 | 5.12 | 236.66 | 69.49 | 17.27 | 136.95 | 43.54 | 58.86 |
AAL20294 (sufB) | 39.46 | 89.57 | 68.53 | 17.4 | 12.1 | 67.12 | 127.05 | 63.56 | 6.22 | 9.32 | 8.73 | 2.62 | 81.52 | 138.18 | 10.22 | 159.89 | 13.35 | 52.7 | 45.61 | 46.14 | 45.89 | 204.95 | 3.71 | 39.24 | 35.23 | 34.7 | 10.42 | 152.56 | 16.09 | 1.68 | 16.64 | 23.66 | 6.87 | 145.51 | 17.91 | 13.45 | 85.53 | 24.4 | 41.55 |
AAL20295 (sufC) | 60.67 | 167.58 | 59.94 | 27.23 | 12.37 | 125.92 | 123.7 | 55.89 | 4.71 | 11.51 | 5.46 | 5.72 | 58.2 | 143.51 | 12.76 | 175.15 | 11.06 | 62.16 | 51.67 | 54.28 | 58.62 | 445.74 | 3.28 | 45.26 | 46.18 | 36.56 | 14.11 | 83.42 | 29.05 | 2.6 | 17.22 | 11.55 | 12.06 | 129.89 | 14.89 | 17.18 | 69.86 | 20.35 | 19.42 |
AAL20296 (sufD) | 54.19 | 128.1 | 90.69 | 27.66 | 20.9 | 167.52 | 98.3 | 73.68 | 9.84 | 14.24 | 12.81 | 5.2 | 90.42 | 194.39 | 15.32 | 160.99 | 10.07 | 50.8 | 55.26 | 49.68 | 63.33 | 316.36 | 5.49 | 22.68 | 44.21 | 37.04 | 16.72 | 127.04 | 33.09 | 3.5 | 22.41 | 20.64 | 14.22 | 115.79 | 13.53 | 18.75 | 37.68 | 33.24 | 31.26 |
AAL20297 (sufS) | 39.1 | 104.63 | 94.65 | 22.22 | 20.48 | 188.94 | 59.17 | 56.55 | 9.5 | 11.94 | 12.19 | 7.0 | 88.07 | 157.67 | 11.08 | 105.56 | 7.02 | 46.21 | 39.28 | 44.72 | 80.32 | 236.46 | 2.71 | 39.87 | 48.57 | 31.92 | 17.5 | 103.35 | 29.97 | 2.39 | 21.18 | 18.14 | 11.92 | 56.11 | 9.32 | 19.55 | 47.92 | 29.31 | 27.47 |
AAL20298 (ynhA) | 46.08 | 109.34 | 96.21 | 20.74 | 23.65 | 166.1 | 91.28 | 58.14 | 11.97 | 11.9 | 17.07 | 6.56 | 100.29 | 143.85 | 12.38 | 182.43 | 11.87 | 39.86 | 52.01 | 49.45 | 116.16 | 220.76 | 10.06 | 48.33 | 69.3 | 21.96 | 22.42 | 96.05 | 27.91 | 1.54 | 26.74 | 25.24 | 11.24 | 139.1 | 16.16 | 20.8 | 67.37 | 30.62 | 37.45 |
AAL20299 (ynhG) | 39.56 | 87.71 | 244.69 | 47.45 | 35.9 | 132.82 | 48.17 | 61.73 | 34.96 | 55.68 | 45.3 | 17.21 | 225.94 | 78.93 | 51.47 | 76.56 | 40.18 | 63.35 | 60.14 | 65.18 | 83.02 | 85.39 | 6.84 | 47.05 | 94.69 | 86.92 | 38.2 | 90.53 | 52.52 | 7.74 | 39.86 | 40.97 | 36.66 | 61.39 | 39.9 | 40.23 | 77.49 | 83.49 | 71.81 |
AAL20627 (yciS) | 214.23 | 182.43 | 253.61 | 160.44 | 128.87 | 37.59 | 198.61 | 257.62 | 83.35 | 182.98 | 72.46 | 139.78 | 392.24 | 241.61 | 98.98 | 263.07 | 80.08 | 217.75 | 229.0 | 308.99 | 173.51 | 247.55 | 244.53 | 207.34 | 276.87 | 179.83 | 172.13 | 239.17 | 327.2 | 49.85 | 200.54 | 211.26 | 384.59 | 221.48 | 82.56 | 154.7 | 233.08 | 152.16 | 263.53 |
AAL20743 (yoaE) | 23.79 | 32.9 | 34.59 | 18.97 | 20.12 | 16.68 | 14.49 | 39.33 | 11.88 | 20.19 | 13.37 | 14.63 | 38.56 | 46.12 | 24.44 | 34.86 | 16.47 | 43.34 | 36.65 | 47.76 | 51.46 | 49.95 | 17.97 | 52.14 | 33.79 | 14.92 | 19.61 | 25.04 | 26.83 | 1.97 | 15.92 | 32.35 | 23.77 | 15.34 | 25.52 | 17.63 | 84.47 | 15.41 | 45.11 |
AAL20783 (STM1868A) | 191.28 | 68.73 | 3077.66 | 10.36 | 578.65 | 75.55 | 93.95 | 25.52 | 46.65 | 7.48 | 86.0 | 4.1 | 1160.87 | 37.59 | 0.0 | 364.07 | 8.98 | 0.0 | 0.0 | 0.0 | 1005.25 | 14.48 | 10.49 | 45.12 | 208.08 | 1.6 | 60.22 | 127.52 | 3.56 | 344.22 | 11.45 | 1686.15 | 7.56 | 2.16 | 12.98 | 39.64 | 194.22 | 1176.47 | 2197.6 |
AAL20794 (exoX) | 43.66 | 86.32 | 83.88 | 46.96 | 36.53 | 22.1 | 76.3 | 84.31 | 51.92 | 73.04 | 70.16 | 36.0 | 101.39 | 107.92 | 77.11 | 96.11 | 47.24 | 95.98 | 82.58 | 104.92 | 49.28 | 94.76 | 39.51 | 74.09 | 87.56 | 78.48 | 34.26 | 83.21 | 80.38 | 15.99 | 58.46 | 51.63 | 94.16 | 123.99 | 63.78 | 45.3 | 91.48 | 47.99 | 75.05 |
AAL20819 (yecE) | 14.11 | 32.9 | 28.01 | 9.78 | 8.31 | 13.36 | 18.02 | 27.0 | 13.96 | 17.57 | 19.26 | 16.98 | 26.56 | 45.16 | 14.31 | 9.57 | 10.16 | 17.75 | 13.05 | 17.18 | 18.53 | 31.13 | 4.57 | 25.08 | 21.07 | 23.39 | 29.83 | 17.04 | 14.04 | 3.22 | 10.28 | 10.09 | 17.49 | 7.1 | 9.94 | 23.2 | 34.95 | 9.38 | 16.24 |
AAL20820 (yecN) | 70.06 | 140.9 | 82.69 | 63.25 | 57.89 | 32.72 | 47.99 | 110.9 | 71.42 | 99.15 | 97.27 | 115.04 | 98.36 | 182.56 | 42.22 | 94.15 | 34.43 | 41.9 | 29.74 | 44.11 | 112.81 | 212.98 | 114.94 | 87.96 | 176.99 | 110.15 | 62.69 | 70.89 | 150.12 | 97.95 | 94.09 | 66.87 | 172.59 | 112.95 | 27.04 | 59.28 | 82.03 | 57.72 | 93.0 |
AAL20850 (ftn) | 98.53 | 544.29 | 165.23 | 366.53 | 441.16 | 64.21 | 182.5 | 223.96 | 563.69 | 541.96 | 429.5 | 612.43 | 99.63 | 48.28 | 1409.04 | 105.78 | 296.49 | 253.27 | 200.21 | 320.3 | 19.21 | 344.79 | 279.84 | 284.11 | 57.68 | 313.36 | 1022.65 | 278.1 | 355.04 | 54.96 | 200.93 | 271.94 | 727.51 | 179.47 | 133.99 | 935.46 | 282.05 | 173.77 | 244.23 |
AAL21148 (narP) | 26.41 | 106.45 | 40.7 | 63.99 | 73.81 | 11.98 | 32.19 | 70.23 | 72.04 | 93.3 | 84.86 | 97.05 | 55.91 | 31.96 | 149.52 | 28.82 | 61.8 | 79.21 | 71.28 | 90.82 | 21.04 | 160.46 | 54.94 | 60.77 | 28.79 | 38.67 | 43.77 | 59.29 | 69.2 | 10.47 | 39.42 | 48.58 | 110.34 | 36.79 | 20.31 | 36.12 | 98.57 | 91.65 | 44.65 |
AAL21308 (mntH) | 29.63 | 58.02 | 129.55 | 8.85 | 8.04 | 7.97 | 17.98 | 35.32 | 16.3 | 8.89 | 23.32 | 2.12 | 165.41 | 38.51 | 2.73 | 23.43 | 7.85 | 41.73 | 34.25 | 48.85 | 41.92 | 108.11 | 5.25 | 35.15 | 30.43 | 31.23 | 13.82 | 79.04 | 9.7 | 4.41 | 19.51 | 214.25 | 9.58 | 23.25 | 17.06 | 14.45 | 71.2 | 44.51 | 360.71 |
AAL21344 (amiA) | 50.61 | 48.83 | 34.98 | 32.26 | 32.07 | 8.83 | 69.9 | 60.1 | 23.04 | 27.09 | 23.27 | 20.71 | 44.39 | 56.38 | 81.32 | 17.29 | 59.45 | 73.03 | 76.21 | 89.62 | 8.22 | 29.89 | 35.79 | 83.41 | 13.05 | 30.73 | 31.98 | 49.96 | 39.93 | 24.94 | 30.7 | 43.48 | 38.3 | 16.24 | 80.96 | 38.14 | 119.32 | 35.26 | 48.54 |
AAL21345 (hemF) | 35.39 | 33.77 | 18.36 | 18.1 | 18.33 | 7.13 | 29.3 | 41.87 | 13.41 | 16.29 | 12.83 | 21.4 | 28.37 | 51.74 | 26.33 | 9.16 | 11.08 | 37.54 | 45.6 | 43.6 | 11.65 | 20.68 | 8.71 | 39.49 | 15.94 | 24.34 | 25.46 | 21.46 | 28.53 | 6.57 | 16.25 | 26.34 | 28.85 | 7.14 | 14.45 | 28.55 | 57.83 | 21.76 | 34.56 |
AAL21389 (yfgD) | 110.98 | 197.6 | 219.18 | 155.1 | 105.01 | 337.77 | 137.82 | 117.64 | 93.51 | 197.34 | 106.43 | 141.7 | 157.16 | 120.14 | 313.37 | 51.14 | 45.1 | 182.74 | 140.89 | 195.47 | 135.45 | 370.77 | 32.74 | 140.67 | 113.79 | 142.55 | 123.74 | 131.08 | 130.61 | 15.02 | 91.04 | 115.44 | 83.57 | 22.35 | 69.97 | 161.83 | 140.74 | 120.49 | 136.48 |
AAL21438 (yfhP) | 426.99 | 290.87 | 245.91 | 108.61 | 66.9 | 297.79 | 280.84 | 345.18 | 260.3 | 133.64 | 480.06 | 108.77 | 132.23 | 871.28 | 27.45 | 69.93 | 65.61 | 89.52 | 96.08 | 97.67 | 382.41 | 689.03 | 39.72 | 211.36 | 1162.14 | 477.71 | 330.9 | 522.41 | 121.07 | 30.41 | 164.11 | 89.91 | 139.44 | 36.07 | 118.88 | 319.45 | 423.34 | 80.1 | 98.14 |
AAL21659 (iroB) | 36.44 | 171.24 | 9.77 | 9.44 | 3.94 | 71.72 | 88.92 | 33.12 | 7.17 | 4.72 | 18.67 | 1.6 | 9.12 | 37.76 | 2.49 | 14.81 | 7.59 | 4.08 | 19.4 | 11.33 | 36.76 | 64.86 | 1.21 | 26.0 | 11.12 | 5.26 | 19.71 | 35.7 | 5.96 | 0.52 | 5.55 | 16.07 | 6.03 | 1.47 | 82.58 | 6.66 | 107.44 | 4.71 | 16.94 |
AAL21660 (iroC) | 14.65 | 86.07 | 5.09 | 6.27 | 2.9 | 41.39 | 16.01 | 14.34 | 7.22 | 3.7 | 12.24 | 2.53 | 5.0 | 18.44 | 2.41 | 5.09 | 4.86 | 2.99 | 5.19 | 4.46 | 14.38 | 31.86 | 0.75 | 19.97 | 5.18 | 3.19 | 8.76 | 11.91 | 4.67 | 0.78 | 4.0 | 5.9 | 3.98 | 0.98 | 26.29 | 5.62 | 41.77 | 3.69 | 5.98 |
AAL21661 (iroD) | 8.7 | 43.42 | 3.19 | 4.04 | 2.44 | 36.98 | 4.56 | 7.33 | 4.82 | 2.42 | 7.65 | 3.6 | 2.89 | 11.46 | 3.32 | 2.22 | 2.3 | 1.73 | 1.73 | 2.13 | 12.83 | 16.53 | 0.39 | 17.04 | 4.65 | 4.01 | 8.91 | 5.32 | 3.53 | 0.46 | 2.09 | 2.68 | 3.41 | 0.63 | 8.19 | 4.16 | 33.77 | 2.56 | 4.12 |
AAL21662 (iroE) | 14.72 | 70.91 | 4.11 | 5.27 | 4.16 | 62.85 | 16.43 | 13.44 | 5.23 | 3.36 | 10.52 | 3.72 | 3.59 | 18.57 | 2.89 | 7.92 | 3.61 | 1.43 | 2.15 | 2.42 | 18.56 | 32.66 | 2.21 | 18.35 | 6.58 | 5.58 | 10.98 | 6.98 | 3.95 | 1.53 | 3.58 | 4.35 | 3.6 | 2.13 | 31.18 | 5.06 | 37.89 | 3.61 | 4.65 |
AAL21663 (iroN) | 59.63 | 154.03 | 8.74 | 9.21 | 2.18 | 257.01 | 72.19 | 47.87 | 9.45 | 6.39 | 27.13 | 2.41 | 5.08 | 42.38 | 3.64 | 38.11 | 5.35 | 9.6 | 8.01 | 10.42 | 66.8 | 90.67 | 1.68 | 35.59 | 22.97 | 6.01 | 17.27 | 23.34 | 4.27 | 1.43 | 7.17 | 9.2 | 3.13 | 3.33 | 3.3 | 4.75 | 119.15 | 3.37 | 16.46 |
AAL21690 (nrdH) | 69.05 | 193.7 | 8.49 | 17.56 | 2.84 | 246.69 | 33.48 | 57.88 | 4.61 | 1.94 | 6.9 | 0.4 | 1.54 | 152.8 | 3.59 | 37.24 | 24.04 | 0.0 | 1.27 | 1.68 | 113.68 | 568.93 | 0.36 | 36.92 | 36.67 | 41.38 | 7.88 | 88.57 | 4.67 | 5.55 | 1.23 | 3.36 | 1.68 | 1.13 | 80.14 | 7.75 | 106.45 | 2.05 | 3.26 |
AAL21691 (nrdI) | 18.11 | 206.2 | 5.1 | 6.58 | 1.45 | 119.23 | 31.44 | 44.08 | 3.68 | 1.26 | 9.61 | 1.15 | 2.73 | 110.48 | 0.9 | 5.41 | 39.87 | 3.47 | 3.13 | 3.34 | 32.09 | 804.97 | 0.05 | 12.42 | 11.63 | 20.43 | 9.99 | 35.19 | 1.95 | 0.79 | 1.56 | 1.81 | 2.01 | 0.46 | 144.92 | 5.26 | 41.1 | 3.07 | 2.4 |
AAL21692 (nrdE) | 13.91 | 102.0 | 5.51 | 7.01 | 3.41 | 119.66 | 24.1 | 35.76 | 8.06 | 4.57 | 19.03 | 1.51 | 6.88 | 91.87 | 3.07 | 13.3 | 16.54 | 7.15 | 6.53 | 8.19 | 20.02 | 354.67 | 2.82 | 32.14 | 10.35 | 18.31 | 6.88 | 33.24 | 4.78 | 1.31 | 5.03 | 4.89 | 4.41 | 3.94 | 57.95 | 5.4 | 70.26 | 4.71 | 5.46 |
AAL21693 (nrdF) | 41.45 | 97.2 | 15.63 | 13.83 | 5.12 | 162.06 | 41.49 | 37.96 | 21.28 | 9.74 | 58.91 | 3.33 | 12.28 | 89.02 | 7.46 | 32.23 | 47.07 | 13.89 | 10.76 | 14.88 | 26.87 | 268.13 | 3.26 | 41.59 | 20.98 | 28.9 | 7.97 | 40.47 | 9.03 | 12.35 | 9.2 | 8.51 | 7.79 | 11.32 | 162.13 | 6.17 | 104.56 | 7.21 | 8.0 |
AAL21741 (sitA) | 140.84 | 538.65 | 84.23 | 27.02 | 6.96 | 314.09 | 453.7 | 117.49 | 9.63 | 11.76 | 19.78 | 1.98 | 75.34 | 216.29 | 3.13 | 90.55 | 31.47 | 29.07 | 41.35 | 34.36 | 976.91 | 1461.7 | 6.36 | 59.31 | 492.24 | 79.15 | 36.88 | 115.59 | 14.0 | 9.38 | 9.85 | 68.51 | 7.73 | 7.52 | 33.4 | 39.98 | 206.98 | 29.01 | 109.08 |
AAL21742 (sitB) | 99.05 | 357.43 | 60.8 | 18.11 | 5.12 | 101.71 | 311.7 | 68.29 | 7.95 | 7.35 | 12.55 | 2.05 | 49.22 | 108.04 | 6.5 | 85.03 | 24.63 | 39.41 | 42.02 | 37.2 | 614.35 | 1077.18 | 2.8 | 54.78 | 197.99 | 26.47 | 22.42 | 85.59 | 9.67 | 2.42 | 8.07 | 15.2 | 5.38 | 4.18 | 27.51 | 18.71 | 164.1 | 26.36 | 42.95 |
AAL21743 (sitC) | 35.58 | 204.4 | 32.82 | 7.27 | 4.38 | 70.98 | 50.83 | 32.8 | 5.57 | 5.44 | 12.81 | 2.02 | 24.76 | 50.06 | 3.47 | 47.75 | 6.57 | 10.67 | 8.47 | 12.04 | 343.91 | 662.12 | 2.4 | 53.25 | 114.9 | 19.32 | 13.8 | 48.61 | 6.54 | 1.63 | 6.35 | 8.57 | 4.01 | 2.92 | 5.56 | 11.09 | 94.91 | 17.04 | 8.39 |
AAL21744 (sitD) | 78.04 | 257.41 | 54.44 | 17.81 | 7.3 | 162.94 | 197.83 | 44.61 | 12.53 | 20.54 | 28.39 | 5.14 | 36.83 | 50.64 | 16.67 | 61.52 | 48.29 | 39.71 | 32.2 | 49.01 | 409.28 | 904.67 | 7.24 | 74.57 | 166.07 | 25.34 | 19.25 | 51.3 | 9.94 | 7.37 | 24.87 | 15.74 | 7.86 | 13.15 | 39.72 | 13.54 | 243.76 | 19.06 | 13.41 |
AAL21804 (rpoS) | 708.79 | 913.46 | 1422.41 | 938.14 | 627.52 | 1026.93 | 1469.27 | 812.03 | 629.16 | 1747.27 | 659.2 | 150.08 | 1544.26 | 1268.98 | 355.8 | 537.05 | 414.87 | 1237.42 | 1567.03 | 1606.35 | 504.27 | 891.41 | 386.81 | 756.74 | 422.56 | 1447.96 | 446.79 | 1782.25 | 1017.33 | 305.35 | 695.26 | 418.41 | 1098.69 | 479.09 | 445.86 | 716.46 | 722.24 | 1404.99 | 453.79 |
AAL22036 (yghB) | 92.26 | 102.75 | 209.53 | 41.63 | 88.48 | 26.87 | 28.34 | 128.89 | 67.77 | 66.79 | 79.44 | 91.41 | 188.44 | 138.09 | 30.23 | 129.33 | 15.82 | 30.05 | 32.37 | 42.09 | 87.31 | 81.74 | 93.93 | 54.28 | 112.3 | 65.02 | 58.76 | 92.7 | 99.75 | 7.15 | 113.88 | 142.51 | 103.88 | 118.12 | 17.16 | 60.55 | 58.55 | 112.58 | 95.93 |
AAL22103 (yqjE) | 239.49 | 376.25 | 759.75 | 455.32 | 282.62 | 440.47 | 262.43 | 344.52 | 137.17 | 308.32 | 136.66 | 138.52 | 1138.25 | 229.6 | 418.31 | 387.57 | 129.43 | 470.85 | 534.26 | 568.81 | 325.78 | 688.43 | 103.12 | 215.45 | 435.39 | 632.72 | 221.27 | 716.07 | 650.09 | 60.49 | 270.46 | 295.75 | 446.94 | 378.34 | 190.61 | 199.98 | 225.53 | 461.87 | 567.4 |
AAL22104 (yqjK) | 171.31 | 452.7 | 398.92 | 306.18 | 159.88 | 531.33 | 63.6 | 226.57 | 138.4 | 340.43 | 122.99 | 124.9 | 595.48 | 157.9 | 46.25 | 91.94 | 33.91 | 71.6 | 71.41 | 74.83 | 412.37 | 3124.11 | 18.22 | 153.42 | 503.89 | 531.97 | 225.51 | 554.21 | 386.37 | 63.19 | 124.89 | 166.5 | 261.89 | 47.47 | 28.27 | 196.51 | 163.2 | 210.4 | 328.88 |
AAL22334 (ppiA) | 85.02 | 134.14 | 61.92 | 110.61 | 43.81 | 32.73 | 259.89 | 133.03 | 62.94 | 170.43 | 118.46 | 165.55 | 121.96 | 194.33 | 139.31 | 78.39 | 100.99 | 155.58 | 167.69 | 195.75 | 13.95 | 100.06 | 230.14 | 166.77 | 26.74 | 232.22 | 68.84 | 252.46 | 107.54 | 114.85 | 82.98 | 80.56 | 76.63 | 119.23 | 183.16 | 60.7 | 176.79 | 39.46 | 116.91 |
AAL22363 (envZ) | 35.47 | 71.36 | 53.48 | 41.08 | 44.2 | 22.04 | 83.11 | 51.62 | 34.37 | 49.0 | 41.52 | 55.68 | 67.08 | 51.94 | 119.12 | 24.07 | 69.46 | 86.86 | 75.55 | 86.67 | 27.97 | 78.81 | 19.68 | 68.2 | 27.59 | 52.14 | 67.33 | 72.16 | 27.17 | 16.01 | 28.99 | 53.3 | 23.87 | 16.75 | 86.69 | 70.89 | 90.62 | 36.91 | 106.61 |
AAL22428 (rpoH) | 1005.2 | 480.59 | 332.46 | 385.38 | 220.48 | 208.57 | 262.43 | 596.65 | 490.19 | 396.89 | 731.29 | 337.15 | 560.03 | 607.08 | 307.14 | 425.25 | 264.77 | 257.16 | 293.44 | 336.75 | 426.74 | 1111.22 | 428.96 | 259.29 | 869.31 | 392.49 | 213.62 | 632.32 | 621.76 | 84.01 | 370.39 | 386.87 | 684.21 | 530.72 | 349.43 | 243.44 | 461.24 | 288.12 | 444.77 |
AAL22495 (yhjW) | 52.79 | 43.99 | 17.26 | 22.55 | 22.22 | 4.7 | 14.78 | 35.51 | 15.62 | 18.43 | 20.88 | 13.23 | 31.3 | 35.49 | 60.56 | 28.72 | 35.1 | 24.41 | 23.85 | 28.82 | 34.66 | 153.87 | 177.97 | 67.74 | 24.3 | 11.44 | 21.86 | 37.2 | 21.24 | 6.54 | 16.87 | 31.56 | 21.97 | 31.2 | 34.65 | 18.7 | 137.29 | 15.52 | 51.98 |
AAL22505 (yiaD) | 78.12 | 113.66 | 56.77 | 90.3 | 69.18 | 271.59 | 128.2 | 81.4 | 79.69 | 63.0 | 87.71 | 80.24 | 36.69 | 92.87 | 48.57 | 8.07 | 74.45 | 22.56 | 26.06 | 38.65 | 26.31 | 460.91 | 30.16 | 161.42 | 38.25 | 140.21 | 211.82 | 48.18 | 34.91 | 22.66 | 17.6 | 88.26 | 39.47 | 4.06 | 42.32 | 181.39 | 274.67 | 64.84 | 73.95 |
AAL22607 (yicH) | 31.1 | 64.84 | 68.65 | 30.16 | 23.86 | 21.1 | 23.72 | 55.53 | 52.97 | 56.86 | 63.39 | 21.24 | 47.14 | 92.78 | 65.89 | 12.38 | 73.38 | 26.23 | 18.76 | 26.23 | 13.88 | 69.06 | 8.69 | 45.25 | 20.25 | 68.08 | 37.76 | 52.0 | 40.24 | 9.63 | 22.34 | 35.8 | 33.28 | 8.56 | 65.64 | 34.59 | 85.4 | 55.7 | 46.36 |
AAL22898 (cpxA) | 82.08 | 79.92 | 62.24 | 55.09 | 40.96 | 32.29 | 43.76 | 91.23 | 49.58 | 66.5 | 67.32 | 94.71 | 54.53 | 178.01 | 55.34 | 16.94 | 48.19 | 34.29 | 37.71 | 40.49 | 23.03 | 103.74 | 24.25 | 80.13 | 25.21 | 141.61 | 126.35 | 70.25 | 86.05 | 21.52 | 20.36 | 46.67 | 60.64 | 14.74 | 73.72 | 92.54 | 92.52 | 55.15 | 63.46 |
AAL22899 (cpxR) | 102.47 | 131.08 | 129.45 | 81.23 | 79.68 | 50.21 | 92.53 | 145.71 | 104.24 | 182.23 | 129.33 | 121.64 | 123.97 | 197.65 | 111.63 | 41.89 | 98.55 | 52.77 | 55.69 | 63.64 | 43.69 | 143.91 | 70.82 | 134.55 | 63.9 | 235.7 | 0.0 | 132.87 | 106.39 | 35.66 | 48.22 | 106.13 | 81.01 | 29.87 | 124.63 | 0.02 | 137.94 | 106.3 | 138.41 |
AAL22965 (yijC) | 143.12 | 142.27 | 121.89 | 96.77 | 79.89 | 32.47 | 82.43 | 182.63 | 124.12 | 105.79 | 194.31 | 88.94 | 114.56 | 197.94 | 167.43 | 49.02 | 161.45 | 72.5 | 65.55 | 84.33 | 37.27 | 107.4 | 67.27 | 100.11 | 58.54 | 81.24 | 129.7 | 144.6 | 106.51 | 26.85 | 84.03 | 136.26 | 104.95 | 38.88 | 140.79 | 146.32 | 108.31 | 94.77 | 132.0 |
AAL22966 (yijD) | 115.91 | 145.12 | 158.18 | 64.23 | 105.67 | 74.23 | 48.39 | 95.59 | 109.27 | 198.34 | 142.16 | 78.01 | 149.64 | 108.42 | 82.71 | 83.96 | 40.3 | 40.19 | 45.45 | 50.74 | 74.18 | 309.56 | 185.09 | 129.05 | 99.92 | 84.38 | 171.83 | 149.5 | 90.29 | 63.48 | 95.81 | 177.67 | 83.61 | 99.67 | 59.91 | 172.81 | 150.41 | 88.1 | 199.54 |
AAL23073 (aphA) | 69.56 | 215.19 | 166.29 | 79.64 | 76.81 | 24.61 | 99.98 | 85.38 | 117.89 | 423.15 | 146.53 | 44.04 | 101.84 | 68.54 | 198.41 | 82.11 | 163.74 | 100.41 | 90.57 | 139.56 | 13.06 | 540.65 | 368.53 | 91.22 | 35.02 | 94.67 | 71.11 | 123.83 | 35.25 | 28.98 | 92.71 | 90.54 | 41.4 | 125.08 | 215.54 | 108.5 | 132.81 | 182.95 | 77.8 |
AAL23171 (psd) | 40.37 | 57.58 | 59.53 | 29.27 | 33.13 | 15.14 | 47.42 | 55.82 | 32.47 | 79.46 | 37.41 | 45.98 | 71.89 | 74.6 | 73.18 | 40.01 | 27.58 | 59.69 | 46.15 | 59.96 | 23.27 | 64.56 | 51.36 | 64.12 | 16.49 | 65.16 | 48.95 | 67.89 | 42.74 | 7.55 | 34.29 | 47.06 | 33.47 | 43.13 | 49.95 | 40.23 | 95.75 | 64.2 | 75.64 |
AAL23231 (ytfP) | 192.21 | 236.53 | 357.18 | 133.79 | 187.1 | 179.54 | 193.01 | 360.76 | 288.75 | 297.08 | 294.87 | 234.29 | 275.01 | 432.18 | 168.81 | 213.27 | 183.07 | 127.2 | 120.33 | 168.73 | 223.4 | 380.59 | 162.38 | 234.88 | 246.92 | 269.43 | 226.83 | 237.29 | 220.21 | 432.79 | 124.58 | 272.83 | 218.33 | 182.49 | 179.37 | 261.91 | 234.18 | 169.39 | 315.67 |
AAL23370 (STM4552) | 779.24 | 545.2 | 40.27 | 64.77 | 28.73 | 15.51 | 629.4 | 201.69 | 223.26 | 15.76 | 691.86 | 25.98 | 55.05 | 132.84 | 36.89 | 196.13 | 53.06 | 45.37 | 11.42 | 29.33 | 701.83 | 1192.85 | 43.58 | 164.5 | 155.16 | 22.11 | 48.9 | 74.41 | 27.02 | 12.75 | 12.8 | 128.19 | 27.23 | 37.96 | 721.66 | 13.34 | 723.76 | 25.37 | 133.63 |
AAL23397 (slt) | 30.55 | 57.56 | 42.88 | 29.82 | 26.91 | 12.85 | 25.76 | 46.22 | 28.75 | 37.89 | 35.97 | 25.13 | 70.86 | 46.48 | 66.23 | 13.02 | 48.39 | 37.51 | 43.21 | 41.51 | 18.35 | 50.72 | 14.97 | 42.4 | 23.0 | 58.28 | 20.52 | 66.0 | 30.44 | 7.94 | 19.19 | 39.61 | 21.08 | 13.32 | 53.29 | 16.9 | 57.82 | 33.09 | 66.34 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)