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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL21657 (fljB) | -0.56 | -0.64 | 1.96 | -0.38 | -5.32 | -4.24 | -2.36 | 1.77 | 1.54 | -2.67 | 1.18 | -1.79 | -3.31 | -4.59 | -5.52 | -0.75 | 2.98 | 2.8 | -2.03 | -2.17 | -4.23 | -5.21 | -9.81 | -3.88 | -4.14 | -1.95 | -0.84 | -0.12 | -4.93 | -6.58 | -1.22 | 1.21 | -6.08 | 0.34 | -5.43 | 0.31 | -1.92 | -4.36 | -4.67 |
AAL21696 (proX) | -0.31 | 0.26 | -1.25 | 1.45 | -2.43 | -0.3 | 1.22 | 0.79 | -1.62 | 2.1 | -0.6 | -2.93 | -1.69 | -0.6 | 1.26 | -1.65 | -1.99 | 1.01 | 1.44 | 1.43 | -3.12 | -0.03 | -4.07 | -0.42 | -2.09 | -0.63 | -3.86 | 1.13 | -0.53 | -1.94 | -0.25 | -1.26 | -0.52 | -2.64 | 0.82 | -0.03 | -0.4 | -1.99 | -2.59 |
AAL21758 (sptP) | -1.1 | 1.19 | -0.19 | -1.17 | -1.28 | -4.01 | -1.04 | 2.99 | -0.81 | 1.79 | 0.04 | -3.43 | -2.71 | -0.57 | -0.6 | 1.06 | 0.71 | -0.58 | -0.17 | 0.09 | -4.16 | -0.96 | -3.37 | -1.08 | -3.49 | -1.23 | -4.03 | 0.37 | -2.4 | 0.05 | 2.05 | -1.08 | -2.2 | 0.53 | -2.14 | -3.02 | 0.49 | -0.76 | -2.2 |
AAL21759 (sicP) | -0.95 | 1.18 | -0.7 | -1.23 | -1.78 | -4.33 | -1.16 | 2.5 | -0.54 | 1.44 | 0.92 | -4.18 | -2.67 | -1.04 | -0.32 | 0.93 | 0.64 | -0.35 | -0.32 | 0.19 | -3.76 | -1.3 | -3.54 | -2.03 | -2.48 | -1.53 | -4.38 | 0.37 | -2.25 | 0.33 | 2.91 | -1.51 | -2.11 | 0.58 | -2.39 | -2.52 | 0.13 | -1.42 | -2.49 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.