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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19948 (STM1014) | 0.5 | 0.61 | 0.5 | -1.53 | -0.79 | -2.59 | -1.63 | 1.46 | 0.53 | -1.44 | 0.7 | -2.89 | 0.48 | 0.88 | -1.56 | -8.4 | -3.25 | -1.02 | -1.16 | -0.57 | -2.24 | -0.12 | - | 2.13 | -0.75 | -1.67 | - | 0.35 | -0.74 | -1.44 | 0.24 | -0.24 | -0.46 | - | -1.68 | - | 3.06 | -0.51 | -0.24 |
AAL21520 (STM2626) | 0.5 | 0.61 | 0.5 | -1.53 | -0.79 | -2.59 | -1.63 | 1.46 | 0.53 | -1.44 | 0.7 | -2.89 | 0.48 | 0.88 | -1.56 | -8.4 | -3.25 | -1.02 | -1.16 | -0.57 | -2.24 | -0.12 | - | 2.13 | -0.75 | -1.67 | - | 0.35 | -0.74 | -1.44 | 0.24 | -0.24 | -0.46 | - | -1.68 | - | 3.06 | -0.51 | -0.24 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.