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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL22223 (STM3354) | -1.84 | 0.88 | -1.07 | 0.7 | -0.71 | -2.51 | -0.77 | -0.85 | -1.08 | -0.89 | -0.68 | -2.5 | -0.99 | -2.3 | -0.3 | -2.1 | -1.7 | -1.22 | -1.53 | -0.76 | -2.83 | -1.58 | -1.94 | 2.47 | -1.36 | -1.14 | -1.29 | -1.6 | -2.12 | -3.93 | 0.8 | -1.25 | -2.42 | -2.05 | 1.96 | -1.46 | 3.54 | -0.8 | -1.34 |
AAL22224 (STM3355) | -2.15 | 1.1 | -0.97 | 0.65 | -1.02 | -2.7 | -1.3 | -0.98 | -1.53 | -1.08 | -1.59 | -3.05 | -0.75 | -2.42 | -1.35 | -2.03 | -2.43 | -1.41 | -1.27 | -1.16 | -3.26 | -2.25 | -2.34 | 2.88 | -1.81 | -1.35 | -1.42 | -1.98 | -1.92 | -3.78 | 0.7 | -1.25 | -2.18 | -2.72 | 1.6 | -1.47 | 3.64 | -0.56 | -1.25 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.