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(Showing raw values)
Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19953 (STM1019) | 201.08 | 222.52 | 439.78 | 252.43 | 307.19 | 97.32 | 138.91 | 90.5 | 136.69 | 200.62 | 332.42 | 86.04 | 329.41 | 37.96 | 88.52 | 0.15 | 28.06 | 80.09 | 104.92 | 110.85 | 178.31 | 80.51 | 0.0 | 49.63 | 305.9 | 153.42 | 41.63 | 852.31 | 776.25 | 523.46 | 210.19 | 244.04 | 556.18 | 0.0 | 73.57 | 47.28 | 128.24 | 422.14 | 192.27 |
AAL21515 (STM2621) | 201.08 | 222.52 | 439.78 | 252.43 | 307.19 | 97.32 | 138.91 | 90.5 | 136.69 | 200.62 | 332.42 | 86.04 | 329.41 | 37.96 | 88.52 | 0.15 | 28.06 | 80.09 | 104.92 | 110.85 | 178.31 | 80.51 | 0.0 | 49.63 | 305.9 | 153.42 | 41.63 | 852.31 | 776.25 | 523.46 | 210.19 | 244.04 | 556.18 | 0.0 | 73.57 | 47.28 | 128.24 | 422.14 | 192.27 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)