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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL20840 (flhC) | -0.31 | 0.28 | 0.03 | -0.36 | -1.07 | -1.85 | -0.87 | -0.22 | 0.6 | 0.88 | 0.51 | -0.23 | -0.63 | 0.42 | 0.56 | 0.77 | -1.23 | 0.54 | 0.09 | 0.8 | -1.29 | -0.21 | -0.82 | -0.99 | -0.6 | 0.03 | 0.6 | 0.3 | 0.23 | -1.67 | 0.43 | -0.42 | 0.6 | 0.86 | -0.79 | -0.32 | 0.21 | -0.8 | -0.41 |
AAL20841 (flhD) | -0.53 | -0.25 | 0.07 | -0.56 | -0.9 | -2.66 | -0.14 | -0.05 | 0.72 | 0.81 | 0.65 | -0.62 | -0.33 | 0.7 | 0.53 | 1.05 | -1.48 | 0.52 | 0.47 | 1.01 | -2.25 | -1.17 | -0.21 | -1.96 | -1.67 | -0.2 | -0.39 | 0.71 | 0.12 | -1.17 | 0.71 | -0.0 | 0.3 | 1.36 | -0.94 | -1.1 | -0.68 | -0.62 | -0.26 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.