- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19136 (yadG) | -0.23 | 0.17 | -0.35 | -0.26 | -0.08 | -2.3 | 0.29 | -0.14 | -0.45 | -0.71 | -0.71 | -0.07 | 0.13 | -0.21 | 0.35 | -0.17 | 0.05 | 0.44 | 0.85 | 0.66 | -1.1 | -1.25 | -0.41 | 1.0 | -0.54 | -0.33 | -0.5 | 0.29 | -0.36 | -2.87 | -1.22 | -0.18 | -0.13 | -0.04 | 0.45 | -1.04 | 1.93 | 0.5 | 0.08 |
AAL22080 (folB) | -0.58 | 0.13 | -1.69 | -1.07 | -2.38 | -2.75 | 1.4 | -0.55 | -0.26 | -1.37 | 0.79 | 0.01 | -0.64 | -0.82 | 1.35 | -0.26 | 0.8 | 0.67 | 0.34 | 0.78 | -0.56 | -0.6 | -0.95 | 0.88 | -1.01 | -0.28 | -0.44 | -0.76 | -2.03 | -2.77 | -1.39 | -0.7 | -1.94 | -1.69 | 0.61 | 0.06 | 2.59 | -1.55 | -0.49 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.