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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL22414 (ugpC) | 0.05 | 0.9 | 1.44 | -1.13 | -0.4 | -0.7 | -0.41 | 0.02 | -1.55 | -0.51 | -1.69 | -1.81 | 1.64 | -0.1 | -0.51 | 0.76 | -0.88 | 0.46 | 0.41 | 0.53 | -1.6 | -1.35 | -3.38 | 0.67 | -1.01 | 0.16 | -0.87 | 0.21 | -1.52 | -3.68 | -1.1 | -0.79 | -2.21 | -0.17 | 1.32 | -0.99 | 1.8 | 0.12 | 0.19 |
AAL22415 (ugpE) | 0.74 | 1.01 | 1.84 | -1.27 | -1.15 | -1.07 | -0.98 | -0.69 | -1.29 | -0.91 | -0.96 | -3.32 | 1.99 | -0.87 | -1.13 | 1.42 | -1.54 | -0.24 | -0.55 | -0.48 | -1.85 | -0.38 | -2.43 | 1.05 | -0.71 | 1.1 | -1.08 | 0.43 | -0.9 | -2.7 | -1.54 | -1.4 | -2.29 | 0.89 | 0.19 | -1.29 | 1.66 | -0.55 | -0.47 |
AAL22416 (ugpA) | 0.98 | 1.09 | 1.38 | -1.49 | -2.22 | -1.08 | -0.9 | -0.89 | -1.5 | -1.08 | -0.55 | -1.93 | 1.79 | -1.16 | -1.09 | 0.53 | -1.15 | -0.28 | -0.21 | -0.14 | -1.2 | 0.03 | -2.58 | 1.44 | -0.38 | 1.2 | -0.51 | -0.35 | -1.05 | -3.03 | -1.77 | -2.07 | -2.47 | 0.18 | 0.36 | -0.76 | 2.43 | -1.25 | -0.88 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.