- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL21008 (cpsG) | -0.91 | 2.29 | -0.18 | -0.06 | -1.26 | 0.03 | -1.1 | -0.71 | -0.95 | -1.95 | -0.94 | -2.62 | -0.14 | -0.46 | -3.05 | -3.7 | -2.19 | -1.8 | -1.39 | -1.29 | -0.61 | -1.94 | -6.68 | 1.85 | -0.23 | 0.4 | 2.31 | -1.35 | -0.65 | -4.21 | -2.83 | -1.49 | -0.09 | -4.25 | -1.82 | -0.52 | 3.02 | -0.27 | -1.21 |
AAL23193 (yjfK) | -0.39 | 1.33 | -0.8 | -0.96 | -1.43 | -2.31 | -0.87 | 0.14 | -0.18 | -0.93 | 0.18 | -2.6 | -0.79 | -0.12 | -0.4 | -1.17 | 0.01 | -0.42 | -0.16 | -0.13 | -3.21 | -2.09 | -1.5 | 2.27 | -1.03 | -1.12 | -0.44 | -1.09 | -1.34 | -2.52 | -2.41 | -1.17 | -1.16 | -0.94 | 0.14 | -1.1 | 3.43 | -0.63 | -0.69 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.