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Heatmap: Cluster_25 (HCCA)

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Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL17052 (BN171_1130006)
 143.2 195.67 157.5 284.06 119.68 99.05 121.46 115.2 239.33 164.5 178.6 139.47 190.6 186.51 284.64 252.93 157.04 170.05 127.75 284.17 329.29 116.25 159.04 296.22 183.46 152.0 44.13 287.29 187.39
CCL17053 (speA)
 4.5 84.69 4.53 16.79 2.58 8.54 9.04 2.42 209.04 4.81 5.76 4.06 47.7 5.56 89.71 277.58 7.2 5.85 2.99 11.02 5.09 1.12 2.47 8.0 9.43 2.84 3.1 3.19 3.53
CCL17188 (pepT)
 58.61 90.85 138.46 150.34 111.27 94.16 155.17 61.86 172.32 100.73 76.1 104.89 168.96 61.23 128.17 142.64 75.1 85.33 55.42 71.97 59.32 79.97 53.76 86.08 75.86 45.3 36.71 85.5 66.39
CCL17234 (BN171_1400006)
 70.15 45.32 56.01 28.81 50.8 35.04 42.64 57.45 119.07 57.83 52.49 74.25 67.53 54.99 25.43 65.81 40.18 58.55 27.6 72.11 25.66 32.55 34.2 24.83 41.15 49.97 12.82 29.15 54.88
CCL17378 (BN171_1450039)
 42.55 18.97 55.99 44.2 59.44 31.35 95.53 19.83 199.43 114.43 102.34 108.06 104.94 57.36 33.84 125.35 57.05 37.89 40.2 93.91 45.35 20.37 67.57 123.73 71.64 50.06 66.18 86.74 100.73
CCL17523 (BN171_1540002)
 316.36 349.31 315.05 477.27 164.46 151.76 306.15 175.01 537.01 198.7 184.13 208.76 354.72 285.37 314.79 269.26 183.86 220.31 191.46 295.13 418.08 51.48 114.18 742.08 526.12 129.11 208.99 502.1 149.26
CCL17527 (BN171_1540006)
 430.95 224.44 307.27 216.54 246.77 156.02 235.54 372.88 420.57 165.35 267.06 187.57 127.98 339.81 164.19 119.56 159.79 248.27 110.26 308.66 112.58 36.0 239.06 67.21 95.87 161.03 22.48 291.59 207.47
CCL17598 (BN171_1600002)
 3.9 8.44 6.5 21.75 9.06 4.61 5.95 4.25 6.87 12.81 6.8 5.25 9.66 5.0 14.85 7.41 4.7 4.85 7.9 7.91 42.03 7.81 14.63 23.2 9.88 5.52 1.21 18.98 4.81
CCL17750 (hisZ)
 1.69 39.89 2.82 27.88 3.01 16.74 22.11 0.83 64.93 29.59 16.42 10.7 21.45 1.23 6.03 21.37 3.86 0.78 12.54 4.69 3.41 3.2 9.36 14.9 15.72 3.06 4.08 5.42 10.71
CCL17758 (BN171_1770002)
 53.29 45.85 51.32 30.63 24.16 28.52 32.81 15.28 117.05 45.13 37.32 37.92 52.38 52.9 24.09 42.31 15.18 31.23 23.05 87.08 30.71 24.66 13.48 26.96 25.43 25.28 5.55 16.95 30.82
CCL17759 (BN171_1770003)
 76.99 70.25 81.6 54.77 75.0 53.87 90.64 63.52 61.13 85.35 89.13 100.91 81.1 99.22 42.15 74.59 41.54 71.84 43.3 122.32 40.14 41.44 48.55 45.32 47.45 59.57 8.9 27.65 85.71
CCL17848 (BN171_1840008)
 148.0 89.23 110.54 81.65 138.05 61.42 122.36 170.16 112.52 126.38 103.52 104.86 110.94 123.64 88.78 94.51 88.5 141.32 61.18 189.79 81.31 65.98 99.89 100.47 78.03 144.9 13.48 120.69 107.08
CCL17933 (BN171_1970002)
 35.3 4.61 48.23 15.13 32.95 24.44 83.39 17.16 129.55 76.3 61.43 69.7 75.63 50.16 5.36 116.12 35.67 34.97 28.43 32.67 8.72 24.7 35.83 34.6 40.2 12.28 5.09 28.6 61.96
CCL17935 (BN171_1970004)
 66.43 24.43 68.38 44.34 60.74 37.05 44.68 46.79 98.72 55.09 38.5 40.53 61.28 75.48 22.84 86.81 47.8 77.41 15.98 49.54 19.65 64.95 12.37 44.49 63.32 36.94 7.16 29.81 33.86
CCL17981 (pyrB)
 87.9 52.68 153.82 182.85 177.04 82.43 139.62 85.02 392.79 124.4 105.45 94.39 138.27 102.55 140.31 147.63 48.6 140.94 117.68 162.45 73.97 44.57 51.11 132.9 79.02 107.91 9.86 48.03 87.57
CCL17982 (pyrK)
 26.91 22.58 50.19 84.77 78.37 62.09 143.71 30.1 90.82 123.64 110.71 105.86 82.95 28.3 70.61 113.93 30.25 55.84 83.94 43.94 23.38 50.64 32.79 114.59 53.19 32.85 9.94 33.35 105.38
CCL17983 (pyrD)
 22.06 24.18 52.86 82.99 92.44 57.55 71.31 34.07 28.15 79.65 51.79 69.38 77.53 22.6 68.12 111.95 29.29 51.15 78.41 36.67 19.25 61.57 30.06 114.69 52.53 32.01 11.87 33.68 48.76
CCL17984 (pyrE)
 104.11 99.69 178.6 206.65 288.2 222.25 180.86 214.06 35.0 192.41 156.42 196.08 116.5 103.17 280.42 202.96 121.81 196.17 195.33 202.0 75.84 181.81 63.0 328.7 169.56 195.55 34.53 57.85 155.31
CCL18040 (BN171_2040005)
 531.46 199.11 373.85 194.34 175.18 147.72 154.31 156.65 362.93 135.28 102.71 93.85 165.69 295.81 146.36 107.23 97.9 166.17 162.14 527.76 157.28 79.15 223.8 166.63 154.33 186.03 71.19 233.34 87.94
CCL18138 (BN171_2100022)
 0.0 0.17 0.15 0.21 0.0 0.77 2.76 0.0 11.15 6.41 4.22 5.36 3.07 0.13 0.17 0.51 3.0 0.34 1.32 0.0 0.21 0.0 3.71 0.11 0.1 0.0 0.4 0.0 2.79
CCL18208 (BN171_2160004)
 4.2 2.82 4.56 2.5 3.92 5.02 7.57 3.17 19.37 6.61 7.89 5.43 9.05 5.7 2.26 13.06 5.08 3.3 4.48 7.81 4.23 2.36 6.41 6.19 5.29 2.04 1.89 6.37 6.25
CCL18220 (BN171_2170007)
 8.19 1.68 18.92 31.33 11.66 27.5 38.15 2.27 181.12 42.37 66.51 54.92 76.32 23.05 3.88 39.05 17.16 7.07 37.65 31.37 12.11 17.67 76.24 39.48 48.24 5.58 19.0 53.01 76.66
CCL18462 (BN171_2360004)
 50.08 5.64 111.11 28.57 110.26 39.6 10.24 33.38 253.11 7.96 11.85 6.62 57.07 21.51 5.98 109.06 54.28 17.31 11.25 27.77 7.31 2.25 22.41 9.48 21.41 15.62 2.22 7.7 4.03
CCL18468 (BN171_2370005)
 34.45 113.39 48.17 77.29 88.57 68.79 70.55 113.81 468.64 135.91 146.94 123.54 142.39 27.27 39.23 326.56 86.22 69.34 45.95 41.89 46.44 101.5 33.57 100.87 113.88 71.27 11.22 68.03 111.95
CCL18605 (SinR)
 23.32 9.06 17.35 9.43 7.87 24.15 34.34 11.1 667.28 215.89 377.49 88.33 105.83 48.31 9.43 10.14 346.91 19.0 17.44 66.06 22.57 4.09 23.91 3.65 6.61 22.39 2.1 89.7 11.71
CCL18606 (BN171_2460002)
 1.5 0.12 2.08 1.57 0.64 8.09 10.67 0.75 134.63 63.87 85.27 42.27 93.57 5.67 0.47 13.14 120.47 1.5 10.87 6.55 2.93 0.68 21.02 3.05 4.34 1.99 1.74 70.7 5.12
CCL18682 (BN171_2480057)
 10.94 10.63 13.17 21.03 9.92 0.0 41.45 12.91 122.42 68.69 74.85 46.89 40.02 11.44 10.32 39.44 42.33 12.25 1.23 0.0 0.28 0.0 0.0 0.0 0.0 0.0 0.0 26.98 50.03
CCL18683 (BN171_2490001)
 35.09 34.13 67.7 113.86 63.26 2.73 23.63 38.27 118.87 40.0 26.2 24.29 42.88 49.5 36.31 37.67 34.14 36.36 5.46 0.0 0.53 0.0 9.5 0.24 0.38 0.32 0.21 18.7 27.36
CCL18684 (BN171_2490002)
 12.83 7.48 15.84 27.66 18.47 20.34 24.06 9.55 66.45 16.85 20.99 21.86 27.81 13.43 11.58 36.55 21.01 16.6 21.2 24.82 25.04 19.71 22.99 22.01 38.08 17.41 23.73 18.51 17.87
CCL18743 (BN171_2600002)
 19.54 14.73 43.37 39.88 24.75 32.48 52.05 9.88 171.78 61.12 43.77 48.81 74.79 41.82 21.06 99.25 36.07 14.19 41.7 60.73 65.83 9.52 74.84 60.3 38.08 23.79 34.53 55.01 49.54
CCL19057 (pyrR)
 30.61 45.19 116.59 169.8 147.36 51.3 60.13 91.23 114.58 77.11 84.61 81.59 75.71 60.78 123.29 123.56 49.24 102.77 19.16 56.33 46.54 16.25 17.66 122.39 87.92 96.02 6.04 81.55 80.15
CCL19073 (BN171_2870003)
 249.63 283.85 258.13 305.58 442.55 294.43 96.83 362.59 886.26 190.85 245.46 246.42 467.29 101.47 418.36 838.68 314.48 213.91 130.65 215.46 300.78 72.58 44.63 130.24 863.33 280.78 37.89 228.64 127.14
CCL19075 (BN171_2870005)
 114.55 121.71 119.42 215.97 105.16 11.46 51.14 132.02 129.22 64.28 66.01 62.71 90.89 46.44 61.11 81.04 27.37 52.44 34.64 65.32 94.62 136.84 64.06 33.52 30.17 46.75 4.1 66.25 63.81
CCL19233 (BN171_2970012)
 71.41 11.52 57.94 25.05 85.98 33.09 33.4 85.31 111.13 33.06 53.56 35.28 70.58 94.2 7.72 121.42 39.47 68.72 25.4 71.78 11.29 26.22 47.48 31.92 34.28 62.13 4.67 23.82 47.07
CCL19326 (BN171_3040002)
 50.23 11.48 98.63 56.19 73.04 14.73 0.0 22.71 245.89 0.0 0.0 7.11 150.48 55.59 41.77 340.15 107.37 65.98 7.92 0.0 1.66 0.0 6.13 0.49 0.0 0.0 0.91 0.0 0.0
CCL19338 (BN171_3070004)
 6.22 1.53 7.82 7.84 8.3 3.18 11.68 1.5 18.46 7.91 7.31 10.56 12.78 7.37 2.92 11.29 4.7 7.5 5.63 11.74 4.86 1.2 5.39 4.61 9.39 6.37 0.57 11.72 8.15
CCL19469 (BN171_3170003)
 6.94 1.07 14.81 3.78 8.07 3.41 7.47 2.76 46.0 18.19 21.34 26.67 15.07 9.72 2.31 18.17 13.96 6.09 11.6 5.44 1.07 4.48 5.2 3.02 4.71 2.53 0.44 22.81 27.75
CCL19620 (smpB)
 400.17 308.29 493.11 390.22 350.43 296.32 515.97 241.73 854.73 618.63 606.31 634.4 362.65 364.2 312.34 328.56 336.83 339.7 458.92 349.52 222.24 92.88 510.48 308.13 292.18 240.04 63.95 205.48 636.0
CCL20059 (carA)
 9.25 22.67 27.05 75.54 50.03 65.32 28.62 13.34 84.01 30.95 28.04 27.94 72.68 11.97 156.19 74.77 14.49 25.52 42.52 17.74 18.87 24.29 33.96 147.21 26.64 16.06 10.86 25.83 20.13
CCL20060 (pyrF)
 15.41 44.71 45.64 124.83 86.8 73.7 26.85 33.36 235.75 26.05 22.35 22.95 64.84 17.24 242.61 66.95 21.82 45.43 44.46 36.97 28.08 58.98 26.7 132.53 23.02 41.72 7.55 18.47 20.97
CCL20296 (BN171_4060003)
 77.65 45.92 104.56 219.17 106.11 0.0 16.94 32.88 173.06 21.0 14.91 18.92 41.91 58.83 84.35 45.74 51.09 63.64 0.27 0.0 0.69 0.0 0.0 0.0 0.0 0.0 0.0 0.0 12.13
CCL20297 (BN171_4060004)
 59.37 22.12 103.18 135.08 90.13 0.0 91.93 25.08 385.79 60.75 78.66 88.07 114.89 52.24 43.37 158.64 84.46 64.31 2.19 0.0 1.83 0.0 0.0 0.0 0.0 0.0 0.0 0.0 93.65
CCL20668 (BN171_880004)
 1.54 1.81 2.01 2.65 1.88 0.01 6.3 1.06 8.63 6.2 3.7 3.97 3.71 0.91 1.22 6.35 2.32 0.95 0.2 0.02 0.1 0.17 0.06 0.01 0.06 0.0 0.01 0.0 3.01
CCL20669 (BN171_880005)
 1.58 3.05 2.77 6.39 2.65 1.16 3.84 1.38 18.0 6.26 4.88 3.22 3.26 1.28 3.0 4.57 2.7 2.02 2.87 0.82 1.81 1.89 0.84 1.54 1.53 0.57 1.13 0.0 2.66

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)