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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL22131 (STM3259) | -2.93 | 1.49 | - | - | - | - | -2.14 | 0.01 | -0.39 | - | -0.34 | -1.18 | - | -0.17 | -0.58 | 0.95 | -0.94 | - | - | - | - | 1.02 | 1.9 | 2.42 | -4.65 | - | -0.55 | - | - | - | -1.43 | - | - | 1.42 | 0.6 | -0.68 | 3.56 | - | - |
AAL22132 (STM3260) | -2.27 | 1.74 | -4.42 | -5.95 | -5.73 | -4.53 | -1.28 | 0.15 | 0.19 | -4.55 | 0.63 | -1.33 | -4.95 | -0.37 | -1.17 | 0.37 | -0.29 | - | -8.74 | -10.35 | -4.82 | 0.69 | 0.93 | 2.76 | -3.26 | -4.86 | 0.04 | -4.95 | -6.76 | -2.88 | -1.19 | -5.58 | -6.85 | 0.11 | 0.8 | 0.06 | 3.49 | -6.47 | -4.71 |
AAL22685 (torS) | 0.18 | 0.79 | -0.7 | -0.76 | -0.75 | -3.31 | -0.66 | 0.19 | -0.56 | -0.93 | 0.21 | 0.05 | 0.25 | -0.15 | 0.53 | 0.31 | -1.28 | -0.43 | -0.42 | -0.12 | -1.91 | -0.66 | 0.94 | 1.66 | -1.21 | -1.44 | -0.69 | -0.22 | -0.31 | -2.12 | -0.4 | 0.32 | -0.26 | 0.54 | -0.38 | -0.75 | 2.04 | -0.81 | 0.85 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.